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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   PBS3   Auxin-responsive GH3 family protein 
 ath-r.7   PBS3   Auxin-responsive GH3 family protein 
 ath-m.9   PBS3   Auxin-responsive GH3 family protein 
 ath-e.2   PBS3   Auxin-responsive GH3 family protein 
 ath-m.4.bio   PBS3   Auxin-responsive GH3 family protein 
 ath-m.4.hor   PBS3   Auxin-responsive GH3 family protein 
 ath-m.4.lig   PBS3   Auxin-responsive GH3 family protein 
 ath-m.4.str   PBS3   Auxin-responsive GH3 family protein 
 ath-m.4.tis   PBS3   Auxin-responsive GH3 family protein 
 bra-r.6   103846581   4-substituted benzoates-glutamate ligase GH3.12 
 bra-r.6   103850859   4-substituted benzoates-glutamate ligase GH3.12 
 bna-r.1   106384098   4-substituted benzoates-glutamate ligase GH3.12 
 bna-r.1   106407722   4-substituted benzoates-glutamate ligase GH3.12-like 
 bna-r.1   106418215   4-substituted benzoates-glutamate ligase GH3.12 

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Top 50 coexpressed genes to PBS3 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PBS3 (ath-u.5 coexpression data)

CoexMap"831173"


athPBS3 | Entrez gene ID : 831173      
Species ath bra bna sbi ghi cre mtr tae cit sot bdi vvi ppo sly zma osa gma nta hvu
Paralog 9 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath04075 [list] [network] Plant hormone signal transduction (433 genes)
GO BP
GO:0016046 [list] [network] detection of fungus  (1 genes)  IMP  
GO:0018874 [list] [network] benzoate metabolic process  (3 genes)  IDA  
GO:0034052 [list] [network] positive regulation of plant-type hypersensitive response  (15 genes)  IMP  
GO:0010112 [list] [network] regulation of systemic acquired resistance  (25 genes)  IMP  
GO:0009863 [list] [network] salicylic acid mediated signaling pathway  (46 genes)  IEP  
GO:0071456 [list] [network] cellular response to hypoxia  (241 genes)  IEP  
GO:0042742 [list] [network] defense response to bacterium  (363 genes)  IEP IMP  
GO:0006952 [list] [network] defense response  (1016 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0052625 [list] [network] N-(4-aminobenzoyl)-L-glutamate synthetase activity  (1 genes)  IDA  
GO:0052626 [list] [network] N-benzoyl-L-glutamate synthetase activity  (1 genes)  IDA  
GO:0052627 [list] [network] N-vanillate-L-glutamate synthetase activity  (1 genes)  IDA  
GO:0052628 [list] [network] N-(4-hydroxybenzoyl)-L-glutamate synthetase activity  (1 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001330075.1 [sequence] [blastp]
NP_001330076.1 [sequence] [blastp]
NP_196836.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 3,  chlo 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for NP_001330075.1)
cyto 6,  chlo 1,  nucl 1,  extr 1,  pero 1,  chlo_mito 1  (predict for NP_001330076.1)
cyto 6,  chlo 1,  nucl 1,  extr 1,  pero 1,  chlo_mito 1  (predict for NP_196836.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001330075.1)
other 8  (predict for NP_001330076.1)
other 8  (predict for NP_196836.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
PBS3
ath-r.7
for
PBS3
ath-m.9
for
PBS3
ath-e.2
for
PBS3
ath-m.4.bio
for
PBS3
ath-m.4.hor
for
PBS3
ath-m.4.lig
for
PBS3
ath-m.4.str
for
PBS3
ath-m.4.tis
for
PBS3
bra-r.6
for
103846581
bra-r.6
for
103850859
bna-r.1
for
106384098
bna-r.1
for
106407722
bna-r.1
for
106418215


Ortholog ID: 15225
Species ath bra bra bna bna bna
Symbol PBS3 LOC103850859 LOC103856011 LOC106407722 LOC106418215 LOC106454850
Function* Auxin-responsive GH3 family protein 4-substituted benzoates-glutamate ligase GH3.12 4-substituted benzoates-glutamate ligase GH3.12 4-substituted benzoates-glutamate ligase GH3.12-like 4-substituted benzoates-glutamate ligase GH3.12 4-substituted benzoates-glutamate ligase GH3.12
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 4
bra00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 4
bra00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831173 103850859 103856011 106407722 106418215 106454850
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