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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G14050   Transducin/WD40 repeat-like superfamily protein 
 ath-r.7   AT5G14050   Transducin/WD40 repeat-like superfamily protein 
 ath-m.9   AT5G14050   Transducin/WD40 repeat-like superfamily protein 
 ath-e.2   AT5G14050   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.bio   AT5G14050   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.hor   AT5G14050   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.lig   AT5G14050   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.str   AT5G14050   Transducin/WD40 repeat-like superfamily protein 
 ath-m.4.tis   AT5G14050   Transducin/WD40 repeat-like superfamily protein 
 gma-u.5   100806692   U3 small nucleolar RNA-associated protein 18 homolog 
 gma-u.5   100806023   U3 small nucleolar RNA-associated protein 18 homolog 
 vvi-u.5   100263672   U3 small nucleolar RNA-associated protein 18 homolog 
 vvi-u.5   100244318   U3 small nucleolar RNA-associated protein 18 homolog 
 ppo-u.5   7476885   U3 small nucleolar RNA-associated protein 18 homolog 
 mtr-u.5   11442001   U3 small nucleolar RNA-associated protein 18 homolog 
 mtr-u.5   11425141   U3 small nucleolar RNA-associated protein 18 homolog 
 sly-u.5   101256636   U3 small nucleolar RNA-associated protein 18 homolog 
 osa-u.5   4343836   U3 small nucleolar RNA-associated protein 18 homolog 
 zma-u.5   100193563   WD repeat-containing protein 50 

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Top 50 coexpressed genes to AT5G14050 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G14050 (ath-u.5 coexpression data)

CoexMap"831254"


athAT5G14050 | Entrez gene ID : 831254      
Species ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 9 2 2 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03008 [list] [network] Ribosome biogenesis in eukaryotes (98 genes)
GO BP
GO CC
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (121 genes)  ISS  
GO:0005730 [list] [network] nucleolus  (394 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_196909.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 3  (predict for NP_196909.1)
Subcellular
localization
TargetP
other 8  (predict for NP_196909.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G14050

.
ath-r.7
for
AT5G14050

.
ath-m.9
for
AT5G14050

.
ath-e.2
for
AT5G14050

.
ath-m.4.bio
for
AT5G14050

.
ath-m.4.hor
for
AT5G14050

.
ath-m.4.lig
for
AT5G14050

.
ath-m.4.str
for
AT5G14050

.
ath-m.4.tis
for
AT5G14050

.
gma-u.5
for
100806692

.
gma-u.5
for
100806023

.
vvi-u.5
for
100263672

.
vvi-u.5
for
100244318

.
ppo-u.5
for
7476885

.
mtr-u.5
for
11442001

.
mtr-u.5
for
11425141

.
sly-u.5
for
101256636

.
osa-u.5
for
4343836

.
zma-u.5
for
100193563

.


Ortholog ID: 6348
Species ath gma gma sly osa zma bra vvi vvi ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot cit bdi nta nta
Symbol AT5G14050 LOC100806692 LOC100806023 LOC101256636 LOC4343836 LOC100193563 LOC103846516 LOC100244318 LOC100263672 LOC7476885 LOC11442001 LOC11425141 LOC123105405 LOC123113679 LOC123452712 LOC107941703 LOC107936215 LOC106418707 LOC106372243 CHLRE_06g255950v5 LOC8065620 LOC8065621 LOC102587394 LOC102630664 LOC100834791 LOC107799409 LOC107798399
Function* Transducin/WD40 repeat-like superfamily protein U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog WD repeat-containing protein 50 U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog uncharacterized protein U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog U3 small nucleolar RNA-associated protein 18 homolog
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
mtr03082 ATP-dependent chromatin remodeling 2
mtr03083 Polycomb repressive complex 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 9
hvu03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna03020 RNA polymerase 3
bna00230 Purine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna00230 Purine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831254 100806692 100806023 101256636 4343836 100193563 103846516 100244318 100263672 7476885 11442001 11425141 123105405 123113679 123452712 107941703 107936215 106418707 106372243 5722125 8065620 8065621 102587394 102630664 100834791 107799409 107798399
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