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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G01160   RING/U-box superfamily protein 
 ath-r.7   AT5G01160   RING/U-box superfamily protein 
 ath-m.9   AT5G01160   RING/U-box superfamily protein 
 ath-e.2   AT5G01160   RING/U-box superfamily protein 
 ath-m.4.bio   AT5G01160   RING/U-box superfamily protein 
 ath-m.4.hor   AT5G01160   RING/U-box superfamily protein 
 ath-m.4.lig   AT5G01160   RING/U-box superfamily protein 
 ath-m.4.str   AT5G01160   RING/U-box superfamily protein 
 ath-m.4.tis   AT5G01160   RING/U-box superfamily protein 
 bra-r.6   103847493   E3 ubiquitin-protein ligase HAKAI homolog 
 bna-r.1   106435883   E3 ubiquitin-protein ligase HAKAI homolog 
 ghi-r.1   107948863   E3 ubiquitin-protein ligase HAKAI homolog 
 ghi-r.1   107913704   E3 ubiquitin-protein ligase HAKAI homolog 
 ghi-r.1   107899032   E3 ubiquitin-protein ligase HAKAI homolog 
 cit-r.1   102607549   E3 ubiquitin-protein ligase HAKAI homolog 
 gma-u.5   102668112   E3 ubiquitin-protein ligase HAKAI homolog 
 gma-u.5   100817582   E3 ubiquitin-protein ligase HAKAI homolog 
 gma-u.5   100803063   E3 ubiquitin-protein ligase HAKAI homolog 
 vvi-u.5   100244343   E3 ubiquitin-protein ligase HAKAI homolog 
 ppo-u.5   7468036   E3 ubiquitin-protein ligase HAKAI homolog 
 mtr-u.5   25498704   E3 ubiquitin-protein ligase HAKAI homolog 
 mtr-u.5   25498267   E3 ubiquitin-protein ligase HAKAI homolog 
 sly-u.5   101255125   E3 ubiquitin-protein ligase HAKAI homolog 
 sot-r.1   102601461   E3 ubiquitin-protein ligase Hakai-like 
 sot-r.1   102582158   E3 ubiquitin-protein ligase Hakai-like 
 nta-r.1   107805152   E3 ubiquitin-protein ligase HAKAI homolog 
 nta-r.1   107801265   E3 ubiquitin-protein ligase HAKAI homolog 
 osa-u.5   4348994   E3 ubiquitin-protein ligase HAKAI homolog 
 zma-u.5   100274384   uncharacterized LOC100274384 
 zma-u.5   100274553   uncharacterized LOC100274553 
 tae-r.2   123181046   E3 ubiquitin-protein ligase HAKAI homolog 
 tae-r.2   123181163   E3 ubiquitin-protein ligase HAKAI homolog 
 tae-r.2   123122346   E3 ubiquitin-protein ligase HAKAI homolog 
 hvu-r.1   123432265   E3 ubiquitin-protein ligase HAKAI homolog 
 sbi-r.1   8067102   E3 ubiquitin-protein ligase Hakai 
 bdi-r.1   100832672   E3 ubiquitin-protein ligase Hakai 

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Top 50 coexpressed genes to AT5G01160 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G01160 (ath-u.5 coexpression data)

CoexMap"831742"


athAT5G01160 | Entrez gene ID : 831742      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 1 3 1 3 1 1 2 1 2 2 1 2 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0001510 [list] [network] RNA methylation  (40 genes)  IMP  
GO:0016567 [list] [network] protein ubiquitination  (170 genes)  IEA  
GO:0006397 [list] [network] mRNA processing  (185 genes)  IMP  
GO CC
GO:0036396 [list] [network] RNA N6-methyladenosine methyltransferase complex  (5 genes)  IDA  
GO:0005576 [list] [network] extracellular region  (3158 genes)  ISM  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (83 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001331186.1 [sequence] [blastp]
NP_195736.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for NP_001331186.1)
nucl 9  (predict for NP_195736.1)
Subcellular
localization
TargetP
other 4,  mito 3  (predict for NP_001331186.1)
other 4,  mito 3  (predict for NP_195736.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G01160
ath-r.7
for
AT5G01160
ath-m.9
for
AT5G01160
ath-e.2
for
AT5G01160
ath-m.4.bio
for
AT5G01160
ath-m.4.hor
for
AT5G01160
ath-m.4.lig
for
AT5G01160
ath-m.4.str
for
AT5G01160
ath-m.4.tis
for
AT5G01160
bra-r.6
for
103847493
bna-r.1
for
106435883
ghi-r.1
for
107948863
ghi-r.1
for
107913704
ghi-r.1
for
107899032
cit-r.1
for
102607549
gma-u.5
for
102668112
gma-u.5
for
100817582
gma-u.5
for
100803063
vvi-u.5
for
100244343
ppo-u.5
for
7468036
mtr-u.5
for
25498704
mtr-u.5
for
25498267
sly-u.5
for
101255125
sot-r.1
for
102601461
sot-r.1
for
102582158
nta-r.1
for
107805152
nta-r.1
for
107801265
osa-u.5
for
4348994
zma-u.5
for
100274384
zma-u.5
for
100274553
tae-r.2
for
123181046
tae-r.2
for
123181163
tae-r.2
for
123122346
hvu-r.1
for
123432265
sbi-r.1
for
8067102
bdi-r.1
for
100832672


Ortholog ID: 7725
Species ath bra bna ghi ghi ghi cit gma gma gma vvi ppo mtr mtr sly sot sot nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol AT5G01160 LOC103847493 LOC106435883 LOC107948863 LOC107899032 LOC107890984 LOC102607549 LOC102668112 LOC100817582 LOC100803063 LOC100244343 LOC7468036 LOC25498704 LOC25498267 LOC101255125 LOC102601461 LOC102582158 LOC107805152 LOC107801265 LOC4348994 LOC100274384 LOC100274553 LOC123181163 LOC123122346 LOC123046895 LOC123432265 LOC8067102 LOC100832672
Function* RING/U-box superfamily protein E3 ubiquitin-protein ligase HAKAI homolog E3 ubiquitin-protein ligase HAKAI homolog E3 ubiquitin-protein ligase HAKAI homolog E3 ubiquitin-protein ligase HAKAI homolog E3 ubiquitin-protein ligase HAKAI homolog E3 ubiquitin-protein ligase HAKAI homolog E3 ubiquitin-protein ligase HAKAI homolog E3 ubiquitin-protein ligase HAKAI homolog E3 ubiquitin-protein ligase HAKAI homolog E3 ubiquitin-protein ligase HAKAI homolog E3 ubiquitin-protein ligase HAKAI homolog E3 ubiquitin-protein ligase HAKAI homolog E3 ubiquitin-protein ligase HAKAI homolog E3 ubiquitin-protein ligase HAKAI homolog E3 ubiquitin-protein ligase Hakai-like E3 ubiquitin-protein ligase Hakai-like E3 ubiquitin-protein ligase HAKAI homolog E3 ubiquitin-protein ligase HAKAI homolog E3 ubiquitin-protein ligase HAKAI homolog uncharacterized LOC100274384 uncharacterized LOC100274553 E3 ubiquitin-protein ligase HAKAI homolog E3 ubiquitin-protein ligase HAKAI homolog E3 ubiquitin-protein ligase HAKAI homolog E3 ubiquitin-protein ligase HAKAI homolog E3 ubiquitin-protein ligase Hakai E3 ubiquitin-protein ligase Hakai
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 8
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 4
bna04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 3
ghi03022 Basal transcription factors 2
ghi03250 Viral life cycle - HIV-1 2
ghi03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 3
ghi03022 Basal transcription factors 2
ghi03250 Viral life cycle - HIV-1 2
ghi03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03015 mRNA surveillance pathway 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03018 RNA degradation 2
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 3
sot03015 mRNA surveillance pathway 3
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 6
nta04141 Protein processing in endoplasmic reticulum 4
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
bdi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831742 103847493 106435883 107948863 107899032 107890984 102607549 102668112 100817582 100803063 100244343 7468036 25498704 25498267 101255125 102601461 102582158 107805152 107801265 4348994 100274384 100274553 123181163 123122346 123046895 123432265 8067102 100832672
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