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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G19900   PRLI-interacting factor 
 ath-r.7   AT5G19900   PRLI-interacting factor 
 ath-m.9   AT5G19900   PRLI-interacting factor 
 ath-e.2   AT5G19900   PRLI-interacting factor 
 ath-m.4.bio   AT5G19900   PRLI-interacting factor 
 ath-m.4.hor   AT5G19900   PRLI-interacting factor 
 ath-m.4.lig   AT5G19900   PRLI-interacting factor 
 ath-m.4.str   AT5G19900   PRLI-interacting factor 
 ath-m.4.tis   AT5G19900   PRLI-interacting factor 
 bra-r.6   103856402   uncharacterized LOC103856402 
 bra-r.6   103851310   uncharacterized LOC103851310 
 bra-r.6   103845711   probable basic-leucine zipper transcription factor E 
 bna-r.1   106439472   ankyrin repeat and ELMO domain-containing protein D 
 bna-r.1   106371778   ankyrin repeat and ELMO domain-containing protein D-like 
 bna-r.1   106380728   uncharacterized LOC106380728 
 ghi-r.1   107937937   uncharacterized LOC107937937 
 ghi-r.1   107914354   uncharacterized LOC107914354 
 ghi-r.1   107906753   uncharacterized LOC107906753 
 cit-r.1   102613141   uncharacterized LOC102613141 
 gma-u.5   100786460   uncharacterized LOC100786460 
 vvi-u.5   100251191   uncharacterized LOC100251191 
 vvi-u.5   100248543   uncharacterized LOC100248543 
 ppo-u.5   18097242   uncharacterized LOC18097242 
 ppo-u.5   7483271   uncharacterized LOC7483271 
 mtr-u.5   11418639   uncharacterized LOC11418639 
 mtr-u.5   25486848   uncharacterized LOC25486848 
 sly-u.5   104647952   uncharacterized LOC104647952 
 sly-u.5   101260961   uncharacterized LOC101260961 
 sot-r.1   102596256   uncharacterized LOC102596256 
 sot-r.1   107062959   uncharacterized LOC107062959 
 nta-r.1   107788660   uncharacterized LOC107788660 
 nta-r.1   107785315   uncharacterized LOC107785315 
 nta-r.1   107764891   uncharacterized LOC107764891 
 osa-u.5   4331261   uncharacterized LOC4331261 
 osa-u.5   4347803   uncharacterized LOC4347803 
 zma-u.5   100283287   uncharacterized LOC100283287 
 zma-u.5   100383613   uncharacterized LOC100383613 
 zma-u.5   100281889   PRLI-interacting factor A 
 tae-r.2   123104754   uncharacterized LOC123104754 
 tae-r.2   123113043   uncharacterized LOC123113043 
 tae-r.2   123122558   uncharacterized LOC123122558 
 hvu-r.1   123451916   uncharacterized LOC123451916 
 hvu-r.1   123401750   uncharacterized LOC123401750 
 sbi-r.1   8066455   uncharacterized LOC8066455 
 sbi-r.1   8074186   uncharacterized LOC8074186 
 bdi-r.1   100834716   uncharacterized LOC100834716 
 bdi-r.1   100829839   uncharacterized LOC100829839 
 cre-r.1   CHLRE_03g207500v5   uncharacterized protein 

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Top 50 coexpressed genes to AT5G19900 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G19900 (ath-u.5 coexpression data)

CoexMap"832112"


athAT5G19900 | Entrez gene ID : 832112      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 3 3 3 1 1 2 2 2 2 2 3 2 3 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001318605.1 [sequence] [blastp]
NP_001331937.1 [sequence] [blastp]
NP_001331938.1 [sequence] [blastp]
NP_001331939.1 [sequence] [blastp]
NP_197490.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 2  (predict for NP_001318605.1)
chlo 8,  nucl 2  (predict for NP_001331937.1)
chlo 8,  nucl 2  (predict for NP_001331938.1)
chlo 8,  nucl 2  (predict for NP_001331939.1)
chlo 8,  nucl 2  (predict for NP_197490.1)
Subcellular
localization
TargetP
chlo 8,  other 3  (predict for NP_001318605.1)
chlo 8,  other 3  (predict for NP_001331937.1)
chlo 8,  other 3  (predict for NP_001331938.1)
chlo 8,  other 3  (predict for NP_001331939.1)
chlo 8,  other 3  (predict for NP_197490.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G19900
ath-r.7
for
AT5G19900
ath-m.9
for
AT5G19900
ath-e.2
for
AT5G19900
ath-m.4.bio
for
AT5G19900
ath-m.4.hor
for
AT5G19900
ath-m.4.lig
for
AT5G19900
ath-m.4.str
for
AT5G19900
ath-m.4.tis
for
AT5G19900
bra-r.6
for
103856402
bra-r.6
for
103851310
bra-r.6
for
103845711
bna-r.1
for
106439472
bna-r.1
for
106371778
bna-r.1
for
106380728
ghi-r.1
for
107937937
ghi-r.1
for
107914354
ghi-r.1
for
107906753
cit-r.1
for
102613141
gma-u.5
for
100786460
vvi-u.5
for
100251191
vvi-u.5
for
100248543
ppo-u.5
for
18097242
ppo-u.5
for
7483271
mtr-u.5
for
11418639
mtr-u.5
for
25486848
sly-u.5
for
104647952
sly-u.5
for
101260961
sot-r.1
for
102596256
sot-r.1
for
107062959
nta-r.1
for
107788660
nta-r.1
for
107785315
nta-r.1
for
107764891
osa-u.5
for
4331261
osa-u.5
for
4347803
zma-u.5
for
100283287
zma-u.5
for
100383613
zma-u.5
for
100281889
tae-r.2
for
123104754
tae-r.2
for
123113043
tae-r.2
for
123122558
hvu-r.1
for
123451916
hvu-r.1
for
123401750
sbi-r.1
for
8066455
sbi-r.1
for
8074186
bdi-r.1
for
100834716
bdi-r.1
for
100829839
cre-r.1
for
CHLRE_03g207500v5


Ortholog ID: 3977
Species ath bra bra bra bna bna bna ghi ghi ghi cit gma vvi vvi ppo ppo mtr mtr sly sly sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol AT5G19900 LOC103856402 LOC103851310 LOC103845711 LOC106439472 LOC106380728 LOC106434475 LOC107937937 LOC107914354 LOC107906753 LOC102613141 LOC100786460 LOC100251191 LOC100248543 LOC18097242 LOC7483271 LOC11418639 LOC25486848 LOC104647952 LOC101260961 LOC102596256 LOC107062959 LOC107788660 LOC107785315 LOC107762048 LOC4331261 LOC4347803 LOC100283287 LOC100383613 LOC100281889 LOC123113043 LOC123122558 LOC123140146 LOC123451916 LOC123401750 LOC8066455 LOC8074186 LOC100834716 LOC100829839 CHLRE_03g207500v5
Function* PRLI-interacting factor uncharacterized LOC103856402 uncharacterized LOC103851310 probable basic-leucine zipper transcription factor E ankyrin repeat and ELMO domain-containing protein D uncharacterized LOC106380728 uncharacterized LOC106434475 uncharacterized LOC107937937 uncharacterized LOC107914354 uncharacterized LOC107906753 uncharacterized LOC102613141 uncharacterized LOC100786460 uncharacterized LOC100251191 uncharacterized LOC100248543 uncharacterized LOC18097242 uncharacterized LOC7483271 uncharacterized LOC11418639 uncharacterized LOC25486848 uncharacterized LOC104647952 uncharacterized LOC101260961 uncharacterized LOC102596256 uncharacterized LOC107062959 uncharacterized LOC107788660 uncharacterized LOC107785315 uncharacterized LOC107762048 uncharacterized LOC4331261 uncharacterized LOC4347803 uncharacterized LOC100283287 uncharacterized LOC100383613 PRLI-interacting factor A uncharacterized LOC123113043 uncharacterized LOC123122558 uncharacterized LOC123140146 uncharacterized LOC123451916 uncharacterized LOC123401750 uncharacterized LOC8066455 uncharacterized LOC8074186 uncharacterized LOC100834716 uncharacterized LOC100829839 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 3
vvi03250 Viral life cycle - HIV-1 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04081 Hormone signaling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04081 Hormone signaling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832112 103856402 103851310 103845711 106439472 106380728 106434475 107937937 107914354 107906753 102613141 100786460 100251191 100248543 18097242 7483271 11418639 25486848 104647952 101260961 102596256 107062959 107788660 107785315 107762048 4331261 4347803 100283287 100383613 100281889 123113043 123122558 123140146 123451916 123401750 8066455 8074186 100834716 100829839 5718823
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