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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   GMI1   gamma-irradiation and mitomycin c induced 1 
 ath-r.7   GMI1   gamma-irradiation and mitomycin c induced 1 
 ath-m.9   GMI1   gamma-irradiation and mitomycin c induced 1 
 ath-e.2   GMI1   gamma-irradiation and mitomycin c induced 1 
 ath-m.4.bio   GMI1   gamma-irradiation and mitomycin c induced 1 
 ath-m.4.hor   GMI1   gamma-irradiation and mitomycin c induced 1 
 ath-m.4.lig   GMI1   gamma-irradiation and mitomycin c induced 1 
 ath-m.4.str   GMI1   gamma-irradiation and mitomycin c induced 1 
 ath-m.4.tis   GMI1   gamma-irradiation and mitomycin c induced 1 
 bra-r.6   103874295   structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 
 bna-r.1   106415214   structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 
 bna-r.1   125575487   structural maintenance of chromosomes flexible hinge domain-containing protein GMI1-like 
 ghi-r.1   107923070   structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 
 ghi-r.1   107904564   structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 
 cit-r.1   102628315   structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 
 vvi-u.5   100252197   structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 
 ppo-u.5   7464275   structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 
 mtr-u.5   11433315   structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 
 sly-u.5   101253262   structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 
 sot-r.1   102601834   uncharacterized LOC102601834 
 nta-r.1   107784267   structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 
 nta-r.1   107778613   structural maintenance of chromosomes flexible hinge domain-containing protein GMI1-like 
 tae-r.2   123166490   structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 
 tae-r.2   123162994   structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 
 tae-r.2   123162993   structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 
 sbi-r.1   8081647   uncharacterized LOC8081647 
 bdi-r.1   100829204   uncharacterized LOC100829204 

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Top 50 coexpressed genes to GMI1 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to GMI1 (ath-u.5 coexpression data)

CoexMap"832495"


athGMI1 | Entrez gene ID : 832495      
Species ath bra bna ghi cit vvi ppo mtr sly sot nta tae sbi bdi osa zma cre hvu gma
Paralog 9 1 2 2 1 1 1 1 1 1 2 3 1 1 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (43 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001330245.1 [sequence] [blastp]
NP_001330246.1 [sequence] [blastp]
NP_197816.3 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  mito 3,  cysk 1,  cyto_mito 1,  mito_plas 1  (predict for NP_001330245.1)
nucl 5,  mito 3,  cysk 1,  cyto_mito 1,  mito_plas 1  (predict for NP_001330246.1)
chlo 4,  nucl 3,  E.R. 2,  cysk_nucl 2  (predict for NP_197816.3)
Subcellular
localization
TargetP
other 8  (predict for NP_001330245.1)
other 8  (predict for NP_001330246.1)
other 8  (predict for NP_197816.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
GMI1
ath-r.7
for
GMI1
ath-m.9
for
GMI1
ath-e.2
for
GMI1
ath-m.4.bio
for
GMI1
ath-m.4.hor
for
GMI1
ath-m.4.lig
for
GMI1
ath-m.4.str
for
GMI1
ath-m.4.tis
for
GMI1
bra-r.6
for
103874295
bna-r.1
for
106415214
bna-r.1
for
125575487
ghi-r.1
for
107923070
ghi-r.1
for
107904564
cit-r.1
for
102628315
vvi-u.5
for
100252197
ppo-u.5
for
7464275
mtr-u.5
for
11433315
sly-u.5
for
101253262
sot-r.1
for
102601834
nta-r.1
for
107784267
nta-r.1
for
107778613
tae-r.2
for
123166490
tae-r.2
for
123162994
tae-r.2
for
123162993
sbi-r.1
for
8081647
bdi-r.1
for
100829204


Ortholog ID: 8621
Species ath bra bna bna ghi ghi cit vvi ppo mtr sly sot nta nta tae tae tae sbi bdi
Symbol GMI1 LOC103874295 LOC106415214 LOC125575487 LOC107923070 LOC107904564 LOC102628315 LOC100252197 LOC7464275 LOC11433315 LOC101253262 LOC102601834 LOC107784267 LOC107778613 LOC123166490 LOC123162993 LOC123147618 LOC8081647 LOC100829204
Function* gamma-irradiation and mitomycin c induced 1 structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 structural maintenance of chromosomes flexible hinge domain-containing protein GMI1-like structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 uncharacterized LOC102601834 structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 structural maintenance of chromosomes flexible hinge domain-containing protein GMI1-like structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 uncharacterized LOC8081647 uncharacterized LOC100829204
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 3
vvi04016 MAPK signaling pathway - plant 2
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00260 Glycine, serine and threonine metabolism 2
ppo00350 Tyrosine metabolism 2
ppo00360 Phenylalanine metabolism 2
ppo00410 beta-Alanine metabolism 2
ppo00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 3
tae03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832495 103874295 106415214 125575487 107923070 107904564 102628315 100252197 7464275 11433315 101253262 102601834 107784267 107778613 123166490 123162993 123147618 8081647 100829204
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