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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G35100   Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 
 ath-r.7   AT5G35100   Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 
 ath-m.9   AT5G35100   Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 
 ath-e.2   AT5G35100   Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 
 ath-m.4.bio   AT5G35100   Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 
 ath-m.4.hor   AT5G35100   Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 
 ath-m.4.lig   AT5G35100   Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 
 ath-m.4.str   AT5G35100   Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 
 ath-m.4.tis   AT5G35100   Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 
 gma-u.5   CYP55   peptidyl-prolyl cis-trans isomerase CYP55 
 gma-u.5   CYP50   peptidyl-prolyl cis-trans isomerase CYP50 
 vvi-u.5   100247841   peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic 
 ppo-u.5   7479540   peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic 
 mtr-u.5   25488393   peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic 
 sly-u.5   101256785   peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic 
 osa-u.5   4345190   peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic 
 zma-u.5   100193669   putative peptidyl-prolyl cis-trans isomerase family protein 

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Top 50 coexpressed genes to AT5G35100 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G35100 (ath-u.5 coexpression data)

CoexMap"833461"


athAT5G35100 | Entrez gene ID : 833461      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 9 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000413 [list] [network] protein peptidyl-prolyl isomerization  (3 genes)  IDA  
GO:0010207 [list] [network] photosystem II assembly  (27 genes)  IMP  
GO CC
GO:0031978 [list] [network] plastid thylakoid lumen  (53 genes)  IDA  
GO:0031977 [list] [network] thylakoid lumen  (69 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA  
GO:0009536 [list] [network] plastid  (5443 genes)  HDA  
GO MF
GO:0003755 [list] [network] peptidyl-prolyl cis-trans isomerase activity  (32 genes)  IDA IEA  
Protein NP_001078636.1 [sequence] [blastp]
NP_001330066.1 [sequence] [blastp]
NP_198360.3 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 3,  chlo_mito 2,  cyto 1,  vacu 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_001078636.1)
chlo 9,  extr 1  (predict for NP_001330066.1)
chlo 9,  extr 1  (predict for NP_198360.3)
Subcellular
localization
TargetP
chlo 5  (predict for NP_001078636.1)
chlo 7  (predict for NP_001330066.1)
chlo 7  (predict for NP_198360.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G35100
ath-r.7
for
AT5G35100
ath-m.9
for
AT5G35100
ath-e.2
for
AT5G35100
ath-m.4.bio
for
AT5G35100
ath-m.4.hor
for
AT5G35100
ath-m.4.lig
for
AT5G35100
ath-m.4.str
for
AT5G35100
ath-m.4.tis
for
AT5G35100
gma-u.5
for
CYP55
gma-u.5
for
CYP50
vvi-u.5
for
100247841
ppo-u.5
for
7479540
mtr-u.5
for
25488393
sly-u.5
for
101256785
osa-u.5
for
4345190
zma-u.5
for
100193669


Ortholog ID: 10333
Species ath bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol AT5G35100 LOC103833742 LOC106418959 LOC106449550 LOC107901367 LOC107962555 LOC102618507 CYP50 CYP55 LOC100247841 LOC7479540 LOC25488393 LOC101256785 LOC102592388 LOC107784319 LOC107824102 LOC4345190 LOC100193669 LOC123148649 LOC123158901 LOC123409351 LOC8059503 LOC100846319 CHLRE_12g561000v5
Function* Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic-like peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic peptidyl-prolyl cis-trans isomerase CYP50 peptidyl-prolyl cis-trans isomerase CYP55 peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic putative peptidyl-prolyl cis-trans isomerase family protein peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 4
bra00030 Pentose phosphate pathway 2
bra01200 Carbon metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00010 Glycolysis / Gluconeogenesis 2
bna00030 Pentose phosphate pathway 2
bna00051 Fructose and mannose metabolism 2
bna00052 Galactose metabolism 2
bna01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00010 Glycolysis / Gluconeogenesis 2
bna00030 Pentose phosphate pathway 2
bna00051 Fructose and mannose metabolism 2
bna00052 Galactose metabolism 2
bna01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00450 Selenocompound metabolism 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00450 Selenocompound metabolism 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 8
cit01200 Carbon metabolism 5
cit00710 Carbon fixation by Calvin cycle 3
cit00010 Glycolysis / Gluconeogenesis 2
cit00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 8
ppo00196 Photosynthesis - antenna proteins 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
mtr01230 Biosynthesis of amino acids 3
mtr00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00630 Glyoxylate and dicarboxylate metabolism 8
nta01200 Carbon metabolism 8
nta04146 Peroxisome 6
nta00260 Glycine, serine and threonine metabolism 4
nta00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00630 Glyoxylate and dicarboxylate metabolism 8
nta01200 Carbon metabolism 8
nta04146 Peroxisome 6
nta00260 Glycine, serine and threonine metabolism 4
nta00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
tae00380 Tryptophan metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 4
bdi01200 Carbon metabolism 3
bdi00260 Glycine, serine and threonine metabolism 2
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00195 Photosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 833461 103833742 106418959 106449550 107901367 107962555 102618507 100785218 100816868 100247841 7479540 25488393 101256785 102592388 107784319 107824102 4345190 100193669 123148649 123158901 123409351 8059503 100846319 5728666
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