Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   CIP4   COP1-interacting protein 4 
 ath-r.7   CIP4   COP1-interacting protein 4 
 ath-e.2   CIP4   COP1-interacting protein 4 
 ath-u.5   CIP4.1   COP1-interacting protein 4.1 
 bra-r.6   103838077   uncharacterized LOC103838077 
 bna-r.1   106358553   uncharacterized LOC106358553 
 bna-r.1   106366521   uncharacterized LOC106366521 
 bna-r.1   106403866   uncharacterized LOC106403866 

close


Top 50 coexpressed genes to CIP4 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to CIP4 (ath-u.5 coexpression data)

CoexMap"833693"


athCIP4 | Entrez gene ID : 833693      
Species ath bra bna zma ghi nta vvi osa sot hvu gma tae sly bdi ppo cit sbi mtr cre
Paralog 4 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010099 [list] [network] regulation of photomorphogenesis  (41 genes)  IMP  
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA  
GO MF
GO:0003712 [list] [network] transcription coregulator activity  (77 genes)  IDA  
Protein NP_001331331.1 [sequence] [blastp]
NP_001331332.1 [sequence] [blastp]
NP_568546.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1,  cyto 1  (predict for NP_001331331.1)
nucl 9,  chlo 1,  cyto 1  (predict for NP_001331332.1)
nucl 9  (predict for NP_568546.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001331331.1)
other 7  (predict for NP_001331332.1)
other 7  (predict for NP_568546.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
CIP4
ath-r.7
for
CIP4
ath-e.2
for
CIP4
ath-u.5
for
CIP4.1
bra-r.6
for
103838077
bna-r.1
for
106358553
bna-r.1
for
106366521
bna-r.1
for
106403866


Ortholog ID: 16809
Species ath ath bra bna bna bna
Symbol CIP4 CIP4.1 LOC103838077 LOC106358553 LOC106366521 LOC106403866
Function* COP1-interacting protein 4 COP1-interacting protein 4.1 uncharacterized LOC103838077 uncharacterized LOC106358553 uncharacterized LOC106366521 uncharacterized LOC106403866
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 4
ath03008 Ribosome biogenesis in eukaryotes 3
ath03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 6
bra03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 3
bna03410 Base excision repair 3
bna03420 Nucleotide excision repair 3
bna03440 Homologous recombination 3
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 833693 827980 103838077 106358553 106366521 106403866
The preparation time of this page was 0.1 [sec].