ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-u.5	AT5G37590	Tetratricopeptide repeat (TPR)-like superfamily protein
ath-r.7	AT5G37590	Tetratricopeptide repeat (TPR)-like superfamily protein
ath-m.9	AT5G37590	Tetratricopeptide repeat (TPR)-like superfamily protein
ath-e.2	AT5G37590	Tetratricopeptide repeat (TPR)-like superfamily protein
ath-m.4.bio	AT5G37590	Tetratricopeptide repeat (TPR)-like superfamily protein
ath-m.4.hor	AT5G37590	Tetratricopeptide repeat (TPR)-like superfamily protein
ath-m.4.lig	AT5G37590	Tetratricopeptide repeat (TPR)-like superfamily protein
ath-m.4.str	AT5G37590	Tetratricopeptide repeat (TPR)-like superfamily protein
ath-m.4.tis	AT5G37590	Tetratricopeptide repeat (TPR)-like superfamily protein
gma-u.5	100817145	kinesin light chain 3
gma-u.5	100813040	kinesin light chain 3
vvi-u.5	100263535	uncharacterized LOC100263535
ppo-u.5	7487399	uncharacterized LOC7487399
mtr-u.5	11406643	kinesin light chain 3
sly-u.5	101261087	uncharacterized LOC101261087
osa-u.5	9267104	uncharacterized LOC9267104
zma-u.5	100192003	uncharacterized LOC100192003

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005739 [list] [network] mitochondrion	(4244 genes)	ISM
GO:0005634 [list] [network] nucleus	(10367 genes)	ISM

GO MF

Protein

NP_001318689.1 [sequence] [blastp]
NP_001330310.1 [sequence] [blastp]

Subcellular
localization
wolf

mito 6, chlo 4	(predict for NP_001318689.1)
mito 6, chlo 3	(predict for NP_001330310.1)

Subcellular
localization
TargetP

mito 7	(predict for NP_001318689.1)
mito 7	(predict for NP_001330310.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for AT5G37590	ath-r.7 for AT5G37590	ath-m.9 for AT5G37590	ath-e.2 for AT5G37590	ath-m.4.bio for AT5G37590	ath-m.4.hor for AT5G37590	ath-m.4.lig for AT5G37590	ath-m.4.str for AT5G37590	ath-m.4.tis for AT5G37590	gma-u.5 for 100817145	gma-u.5 for 100813040	vvi-u.5 for 100263535	ppo-u.5 for 7487399	mtr-u.5 for 11406643	sly-u.5 for 101261087	osa-u.5 for 9267104	zma-u.5 for 100192003

Ortholog

Ortholog ID: 7359

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

Tetratricopeptide repeat (TPR)-like superfamily protein

kinesin light chain 3

kinesin light chain

kinesin light chain-like

kinesin light chain 3

uncharacterized LOC102626616

kinesin light chain 3

uncharacterized LOC100263535

uncharacterized LOC7487399

kinesin light chain 3

uncharacterized LOC101261087

kinesin light chain 3

uncharacterized LOC107777859

uncharacterized LOC107764830

uncharacterized LOC9267104

uncharacterized LOC100192003

uncharacterized LOC123085127

uncharacterized LOC123098196

kinesin light chain 3-like

nephrocystin-3

kinesin light chain 3

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00540	Lipopolysaccharide biosynthesis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00540	Lipopolysaccharide biosynthesis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00230	Purine metabolism	2
gma01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03020	RNA polymerase	3
ppo03018	RNA degradation	2
ppo03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03022	Basal transcription factors	2
mtr03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03008	Ribosome biogenesis in eukaryotes	2
osa04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03440	Homologous recombination	2
zma03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03013	Nucleocytoplasmic transport	2
sbi04120	Ubiquitin mediated proteolysis	2
sbi03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03013	Nucleocytoplasmic transport	4
bdi03040	Spliceosome	3
bdi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00190	Oxidative phosphorylation	4

Expression

Expression pattern

Entrez Gene ID^*

833737

103863733

106407012

106353014

107953950

107899367

102626616

100813040

100263535

7487399

11406643

101261087

102596241

107777859

107764830

9267104

100192003

123085127

123098196

123408992

8086458

100840492

5715283

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to AT5G37590 (ath-u.5 coexpression data)

Top 50 enrichment test to AT5G37590 (ath-u.5 coexpression data)


Species	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	9	2	1	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT5G37590 (ath-u.5 coexpression data)

Top 50 enrichment test to AT5G37590 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**