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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   YSL4   YELLOW STRIPE like 4 
 ath-r.7   YSL4   YELLOW STRIPE like 4 
 ath-m.9   YSL4   YELLOW STRIPE like 4 
 ath-e.2   YSL4   YELLOW STRIPE like 4 
 ath-m.4.bio   YSL4   YELLOW STRIPE like 4 
 ath-m.4.hor   YSL4   YELLOW STRIPE like 4 
 ath-m.4.lig   YSL4   YELLOW STRIPE like 4 
 ath-m.4.str   YSL4   YELLOW STRIPE like 4 
 ath-m.4.tis   YSL4   YELLOW STRIPE like 4 
 ath-u.5   YSL6   YELLOW STRIPE like 6 
 bra-r.6   103836976   probable metal-nicotianamine transporter YSL6 
 bna-r.1   106428874   probable metal-nicotianamine transporter YSL6 
 bna-r.1   106413985   probable metal-nicotianamine transporter YSL6 
 ghi-r.1   107914009   probable metal-nicotianamine transporter YSL6 
 ghi-r.1   107897292   probable metal-nicotianamine transporter YSL6 
 cit-r.1   102617824   probable metal-nicotianamine transporter YSL6 
 gma-u.5   100799897   probable metal-nicotianamine transporter YSL6 
 gma-u.5   100782700   probable metal-nicotianamine transporter YSL6 
 vvi-u.5   100260063   probable metal-nicotianamine transporter YSL6 
 ppo-u.5   7495797   probable metal-nicotianamine transporter YSL6 
 mtr-u.5   11438343   probable metal-nicotianamine transporter YSL6 
 sly-u.5   101263262   probable metal-nicotianamine transporter YSL6 
 sot-r.1   102581903   probable metal-nicotianamine transporter YSL6 
 nta-r.1   107808242   putative metal-nicotianamine transporter YSL6 
 nta-r.1   107787813   putative metal-nicotianamine transporter YSL6 
 osa-u.5   4335676   probable metal-nicotianamine transporter YSL6 
 osa-u.5   4335677   probable metal-nicotianamine transporter YSL5 
 zma-u.5   100279387   uncharacterized LOC100279387 
 zma-u.5   100192483   putative metal-nicotianamine transporter YSL6 
 tae-r.2   123048558   probable metal-nicotianamine transporter YSL6 
 tae-r.2   123048559   probable metal-nicotianamine transporter YSL6 
 tae-r.2   123050190   probable metal-nicotianamine transporter YSL6 
 hvu-r.1   123426554   probable metal-nicotianamine transporter YSL6 
 sbi-r.1   8070972   probable metal-nicotianamine transporter YSL6 
 sbi-r.1   8070973   probable metal-nicotianamine transporter YSL5 
 bdi-r.1   100828262   probable metal-nicotianamine transporter YSL5 
 bdi-r.1   100839874   probable metal-nicotianamine transporter YSL6 
 bdi-r.1   100840173   probable metal-nicotianamine transporter YSL6 

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Top 50 coexpressed genes to YSL4 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to YSL4 (ath-u.5 coexpression data)

CoexMap"834102"


athYSL4 | Entrez gene ID : 834102      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 1 2 2 1 2 1 1 1 1 1 2 2 2 3 1 2 3 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0034755 [list] [network] iron ion transmembrane transport  (12 genes)  IGI  
GO CC
GO:0009705 [list] [network] plant-type vacuole membrane  (117 genes)  IDA  
GO:0000325 [list] [network] plant-type vacuole  (788 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
GO:0035673 [list] [network] oligopeptide transmembrane transporter activity  (22 genes)  IEA  
Protein NP_001331151.1 [sequence] [blastp]
NP_001331152.1 [sequence] [blastp]
NP_198916.2 [sequence] [blastp]
Subcellular
localization
wolf
plas 6,  vacu 2,  E.R. 1,  golg 1  (predict for NP_001331151.1)
plas 4,  cyto 2,  E.R. 2,  golg_plas 2,  cysk_plas 2,  mito_plas 2,  cyto_E.R. 2  (predict for NP_001331152.1)
plas 4,  cyto 2,  E.R. 2,  golg_plas 2,  cysk_plas 2,  mito_plas 2,  cyto_E.R. 2  (predict for NP_198916.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001331151.1)
other 9  (predict for NP_001331152.1)
other 9  (predict for NP_198916.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
YSL4
ath-r.7
for
YSL4
ath-m.9
for
YSL4
ath-e.2
for
YSL4
ath-m.4.bio
for
YSL4
ath-m.4.hor
for
YSL4
ath-m.4.lig
for
YSL4
ath-m.4.str
for
YSL4
ath-m.4.tis
for
YSL4
ath-u.5
for
YSL6
bra-r.6
for
103836976
bna-r.1
for
106428874
bna-r.1
for
106413985
ghi-r.1
for
107914009
ghi-r.1
for
107897292
cit-r.1
for
102617824
gma-u.5
for
100799897
gma-u.5
for
100782700
vvi-u.5
for
100260063
ppo-u.5
for
7495797
mtr-u.5
for
11438343
sly-u.5
for
101263262
sot-r.1
for
102581903
nta-r.1
for
107808242
nta-r.1
for
107787813
osa-u.5
for
4335676
osa-u.5
for
4335677
zma-u.5
for
100279387
zma-u.5
for
100192483
tae-r.2
for
123048558
tae-r.2
for
123048559
tae-r.2
for
123050190
hvu-r.1
for
123426554
sbi-r.1
for
8070972
sbi-r.1
for
8070973
bdi-r.1
for
100828262
bdi-r.1
for
100839874
bdi-r.1
for
100840173


Ortholog ID: 4565
Species ath ath bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa osa zma zma tae tae tae hvu hvu sbi sbi bdi bdi bdi
Symbol YSL4 YSL6 LOC103836976 LOC106428874 LOC106413985 LOC107914009 LOC107897292 LOC102617824 LOC100799897 LOC100782700 LOC100260063 LOC7495797 LOC11438343 LOC101263262 LOC102581903 LOC107808242 LOC107787813 LOC4335676 LOC4335677 LOC100279387 LOC100192483 LOC123186217 LOC123189066 LOC123189065 LOC123426554 LOC123426555 LOC8070972 LOC8070973 LOC100828262 LOC100839874 LOC100840173
Function* YELLOW STRIPE like 4 YELLOW STRIPE like 6 probable metal-nicotianamine transporter YSL6 probable metal-nicotianamine transporter YSL6 probable metal-nicotianamine transporter YSL6 probable metal-nicotianamine transporter YSL6 probable metal-nicotianamine transporter YSL6 probable metal-nicotianamine transporter YSL6 probable metal-nicotianamine transporter YSL6 probable metal-nicotianamine transporter YSL6 probable metal-nicotianamine transporter YSL6 probable metal-nicotianamine transporter YSL6 probable metal-nicotianamine transporter YSL6 probable metal-nicotianamine transporter YSL6 probable metal-nicotianamine transporter YSL6 putative metal-nicotianamine transporter YSL6 putative metal-nicotianamine transporter YSL6 probable metal-nicotianamine transporter YSL6 probable metal-nicotianamine transporter YSL5 uncharacterized LOC100279387 putative metal-nicotianamine transporter YSL6 probable metal-nicotianamine transporter YSL6 probable metal-nicotianamine transporter YSL5 probable metal-nicotianamine transporter YSL6 probable metal-nicotianamine transporter YSL6 probable metal-nicotianamine transporter YSL5 probable metal-nicotianamine transporter YSL6 probable metal-nicotianamine transporter YSL5 probable metal-nicotianamine transporter YSL5 probable metal-nicotianamine transporter YSL6 probable metal-nicotianamine transporter YSL6
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00510 N-Glycan biosynthesis 3
ath00100 Steroid biosynthesis 3
ath00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 2
ath00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00564 Glycerophospholipid metabolism 4
bna04070 Phosphatidylinositol signaling system 4
bna00561 Glycerolipid metabolism 2
bna00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00564 Glycerophospholipid metabolism 4
bna04070 Phosphatidylinositol signaling system 4
bna00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04620 Toll-like receptor signaling pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04620 Toll-like receptor signaling pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
cit04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 3
gma04136 Autophagy - other 2
gma04120 Ubiquitin mediated proteolysis 2
gma04081 Hormone signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04142 Lysosome 2
vvi04081 Hormone signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00600 Sphingolipid metabolism 2
ppo04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 3
sly00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
sly00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00280 Valine, leucine and isoleucine degradation 3
sot00071 Fatty acid degradation 2
sot01212 Fatty acid metabolism 2
sot04146 Peroxisome 2
sot00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 2
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00350 Tyrosine metabolism 2
nta00360 Phenylalanine metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 2
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00350 Tyrosine metabolism 2
nta00360 Phenylalanine metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04136 Autophagy - other 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
tae04626 Plant-pathogen interaction 3
tae04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 8
tae00100 Steroid biosynthesis 3
tae00909 Sesquiterpenoid and triterpenoid biosynthesis 3
tae00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 3
bdi01200 Carbon metabolism 3
bdi01240 Biosynthesis of cofactors 2
bdi00260 Glycine, serine and threonine metabolism 2
bdi01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834102 822319 103836976 106428874 106413985 107914009 107897292 102617824 100799897 100782700 100260063 7495797 11438343 101263262 102581903 107808242 107787813 4335676 4335677 100279387 100192483 123186217 123189066 123189065 123426554 123426555 8070972 8070973 100828262 100839874 100840173
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