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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G41580   RING/U-box superfamily protein 
 ath-r.7   AT5G41580   RING/U-box superfamily protein 
 ath-m.9   AT5G41580   RING/U-box superfamily protein 
 ath-e.2   AT5G41580   RING/U-box superfamily protein 
 ath-m.4.bio   AT5G41580   RING/U-box superfamily protein 
 ath-m.4.hor   AT5G41580   RING/U-box superfamily protein 
 ath-m.4.lig   AT5G41580   RING/U-box superfamily protein 
 ath-m.4.str   AT5G41580   RING/U-box superfamily protein 
 ath-m.4.tis   AT5G41580   RING/U-box superfamily protein 
 ath-u.5   AT1G08910   zinc ion binding protein 
 bra-r.6   103850224   E4 SUMO-protein ligase PIAL2 
 bra-r.6   103843371   E4 SUMO-protein ligase PIAL1 
 bra-r.6   103864092   E4 SUMO-protein ligase PIAL2 
 bna-r.1   106453184   E4 SUMO-protein ligase PIAL1 
 bna-r.1   106446303   E4 SUMO-protein ligase PIAL2 
 bna-r.1   106446271   E4 SUMO-protein ligase PIAL2-like 
 ghi-r.1   121204462   E4 SUMO-protein ligase PIAL2 
 ghi-r.1   107947520   E4 SUMO-protein ligase PIAL2 
 cit-r.1   102611381   E4 SUMO-protein ligase PIAL2 
 gma-u.5   100784204   E4 SUMO-protein ligase PIAL2 
 gma-u.5   100780539   E4 SUMO-protein ligase PIAL2 
 vvi-u.5   100262014   E4 SUMO-protein ligase PIAL2 
 vvi-u.5   100256919   E4 SUMO-protein ligase PIAL2 
 vvi-u.5   100243215   E4 SUMO-protein ligase PIAL1 
 ppo-u.5   7458200   E4 SUMO-protein ligase PIAL1 
 mtr-u.5   11437221   E4 SUMO-protein ligase PIAL2 
 mtr-u.5   25502457   E4 SUMO-protein ligase PIAL2 
 sly-u.5   101255315   E4 SUMO-protein ligase PIAL2 
 sot-r.1   102591021   uncharacterized LOC102591021 
 nta-r.1   107781111   E4 SUMO-protein ligase PIAL2 
 nta-r.1   107820588   E4 SUMO-protein ligase PIAL2-like 
 nta-r.1   107778433   E4 SUMO-protein ligase PIAL2 
 osa-u.5   4340227   E4 SUMO-protein ligase PIAL1 
 zma-u.5   100217275   uncharacterized LOC100217275 
 tae-r.2   123163142   E4 SUMO-protein ligase PIAL2 
 tae-r.2   123164074   E4 SUMO-protein ligase PIAL2 
 tae-r.2   123147520   E4 SUMO-protein ligase PIAL2 
 hvu-r.1   123413595   E4 SUMO-protein ligase PIAL2-like 
 sbi-r.1   8070878   E4 SUMO-protein ligase PIAL2 
 bdi-r.1   100822725   E4 SUMO-protein ligase PIAL2 

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Top 50 coexpressed genes to AT5G41580 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G41580 (ath-u.5 coexpression data)

CoexMap"834160"


athAT5G41580 | Entrez gene ID : 834160      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 3 3 2 1 2 3 1 2 1 1 3 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath04120 [list] [network] Ubiquitin mediated proteolysis (162 genes)
GO BP
GO:0016925 [list] [network] protein sumoylation  (14 genes)  IDA  
GO:0060966 [list] [network] regulation of gene silencing by regulatory ncRNA  (18 genes)  IMP  
GO:0009651 [list] [network] response to salt stress  (473 genes)  IMP  
GO:0009737 [list] [network] response to abscisic acid  (550 genes)  IMP  
GO:0006970 [list] [network] response to osmotic stress  (578 genes)  IMP  
GO CC
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0019789 [list] [network] SUMO transferase activity  (5 genes)  TAS  
GO:0042803 [list] [network] protein homodimerization activity  (237 genes)  IDA  
GO:0042802 [list] [network] identical protein binding  (414 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_198973.3 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 3  (predict for NP_198973.3)
Subcellular
localization
TargetP
mito 5  (predict for NP_198973.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G41580
ath-r.7
for
AT5G41580
ath-m.9
for
AT5G41580
ath-e.2
for
AT5G41580
ath-m.4.bio
for
AT5G41580
ath-m.4.hor
for
AT5G41580
ath-m.4.lig
for
AT5G41580
ath-m.4.str
for
AT5G41580
ath-m.4.tis
for
AT5G41580
ath-u.5
for
AT1G08910
bra-r.6
for
103850224
bra-r.6
for
103843371
bra-r.6
for
103864092
bna-r.1
for
106453184
bna-r.1
for
106446303
bna-r.1
for
106446271
ghi-r.1
for
121204462
ghi-r.1
for
107947520
cit-r.1
for
102611381
gma-u.5
for
100784204
gma-u.5
for
100780539
vvi-u.5
for
100262014
vvi-u.5
for
100256919
vvi-u.5
for
100243215
ppo-u.5
for
7458200
mtr-u.5
for
11437221
mtr-u.5
for
25502457
sly-u.5
for
101255315
sot-r.1
for
102591021
nta-r.1
for
107781111
nta-r.1
for
107820588
nta-r.1
for
107778433
osa-u.5
for
4340227
zma-u.5
for
100217275
tae-r.2
for
123163142
tae-r.2
for
123164074
tae-r.2
for
123147520
hvu-r.1
for
123413595
sbi-r.1
for
8070878
bdi-r.1
for
100822725


Ortholog ID: 4794
Species ath ath bra bra bra bna bna bna ghi ghi cit gma gma vvi vvi vvi ppo mtr mtr sly sot nta nta nta osa zma tae tae tae hvu sbi bdi
Symbol AT5G41580 AT1G08910 LOC103843371 LOC103864092 LOC103836369 LOC106377015 LOC125576572 LOC106419879 LOC121204462 LOC107947520 LOC102611381 LOC100784204 LOC100780539 LOC100262014 LOC100256919 LOC100243215 LOC7458200 LOC11437221 LOC25502457 LOC101255315 LOC102591021 LOC107820588 LOC107778433 LOC107778434 LOC4340227 LOC100217275 LOC123163142 LOC123164074 LOC123147520 LOC123413595 LOC8070878 LOC100822725
Function* RING/U-box superfamily protein zinc ion binding protein E4 SUMO-protein ligase PIAL1 E4 SUMO-protein ligase PIAL2 E4 SUMO-protein ligase PIAL1 E4 SUMO-protein ligase PIAL1 E4 SUMO-protein ligase PIAL2-like E4 SUMO-protein ligase PIAL1-like E4 SUMO-protein ligase PIAL2 E4 SUMO-protein ligase PIAL2 E4 SUMO-protein ligase PIAL2 E4 SUMO-protein ligase PIAL2 E4 SUMO-protein ligase PIAL2 E4 SUMO-protein ligase PIAL2 E4 SUMO-protein ligase PIAL2 E4 SUMO-protein ligase PIAL1 E4 SUMO-protein ligase PIAL1 E4 SUMO-protein ligase PIAL2 E4 SUMO-protein ligase PIAL2 E4 SUMO-protein ligase PIAL2 uncharacterized LOC102591021 E4 SUMO-protein ligase PIAL2-like E4 SUMO-protein ligase PIAL2 E4 SUMO-protein ligase PIAL2-like E4 SUMO-protein ligase PIAL1 uncharacterized LOC100217275 E4 SUMO-protein ligase PIAL2 E4 SUMO-protein ligase PIAL2 E4 SUMO-protein ligase PIAL2 E4 SUMO-protein ligase PIAL2-like E4 SUMO-protein ligase PIAL2 E4 SUMO-protein ligase PIAL2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath04120 Ubiquitin mediated proteolysis 2
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03430 Mismatch repair 4
bra03030 DNA replication 2
bra03410 Base excision repair 2
bra03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 3
bra03013 Nucleocytoplasmic transport 2
bra04144 Endocytosis 2
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 3
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 3
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00020 Citrate cycle (TCA cycle) 2
vvi00630 Glyoxylate and dicarboxylate metabolism 2
vvi01200 Carbon metabolism 2
vvi01210 2-Oxocarboxylic acid metabolism 2
vvi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 3
ppo03013 Nucleocytoplasmic transport 3
ppo03060 Protein export 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 4
sot03040 Spliceosome 4
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 4
nta00240 Pyrimidine metabolism 4
nta00480 Glutathione metabolism 4
nta01232 Nucleotide metabolism 4
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
nta03082 ATP-dependent chromatin remodeling 2
nta04075 Plant hormone signal transduction 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae03450 Non-homologous end-joining 3
tae04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834160 837412 103843371 103864092 103836369 106377015 125576572 106419879 121204462 107947520 102611381 100784204 100780539 100262014 100256919 100243215 7458200 11437221 25502457 101255315 102591021 107820588 107778433 107778434 4340227 100217275 123163142 123164074 123147520 123413595 8070878 100822725
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