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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G42960   outer envelope pore 24B-like protein 
 ath-r.7   AT5G42960   outer envelope pore 24B-like protein 
 ath-m.9   AT5G42960   outer envelope pore 24B-like protein 
 ath-e.2   AT5G42960   outer envelope pore 24B-like protein 
 ath-m.4.bio   AT5G42960   outer envelope pore 24B-like protein 
 ath-m.4.hor   AT5G42960   outer envelope pore 24B-like protein 
 ath-m.4.lig   AT5G42960   outer envelope pore 24B-like protein 
 ath-m.4.str   AT5G42960   outer envelope pore 24B-like protein 
 ath-m.4.tis   AT5G42960   outer envelope pore 24B-like protein 
 ath-u.5   AT1G45170   outer envelope pore 24B-like protein 
 bra-r.6   103828001   outer envelope pore protein 24B, chloroplastic 
 bra-r.6   103848571   outer envelope pore protein 24B, chloroplastic 
 bna-r.1   106430399   outer envelope pore protein 24B, chloroplastic 
 bna-r.1   106431740   outer envelope pore protein 24B, chloroplastic 
 bna-r.1   106396390   outer envelope pore protein 24B, chloroplastic 
 ghi-r.1   107905415   outer envelope pore protein 24A, chloroplastic 
 ghi-r.1   107938887   outer envelope pore protein 24A, chloroplastic 
 cit-r.1   102617585   outer envelope pore protein 24A, chloroplastic 
 cit-r.1   102628989   outer envelope pore protein 24B, chloroplastic 
 gma-u.5   100802815   outer envelope pore protein 24, chloroplastic 
 gma-u.5   100812098   outer envelope pore protein 24B, chloroplastic-like 
 vvi-u.5   100259086   outer envelope pore protein 24B, chloroplastic 
 ppo-u.5   18096576   outer envelope pore protein 24A, chloroplastic 
 ppo-u.5   7463399   outer envelope pore protein 24A, chloroplastic 
 mtr-u.5   25482115   outer envelope pore protein 24, chloroplastic 
 sly-u.5   101255988   outer envelope pore protein 24A, chloroplastic 
 sly-u.5   101055526   Hop-interacting protein THI045 
 sot-r.1   102586359   outer envelope pore protein 24, chloroplastic-like 
 sot-r.1   102584345   outer envelope pore protein 24A, chloroplastic 
 sot-r.1   102595398   outer envelope pore protein 24A, chloroplastic-like 
 nta-r.1   107771415   outer envelope pore protein 24B, chloroplastic-like 
 nta-r.1   107832248   outer envelope pore protein 24, chloroplastic-like 
 nta-r.1   107810257   outer envelope pore protein 24, chloroplastic 
 osa-u.5   4334833   outer envelope pore protein 24, chloroplastic-like 
 zma-u.5   100382679   Outer envelope pore protein 24A chloroplastic 
 zma-u.5   542205   Outer envelope pore protein 24A chloroplastic 
 tae-r.2   123087498   outer envelope pore protein 24, chloroplastic 
 tae-r.2   123114439   outer envelope pore protein 24, chloroplastic 
 tae-r.2   123123941   outer envelope pore protein 24, chloroplastic 
 hvu-r.1   123395206   outer envelope pore protein 24, chloroplastic-like 
 bdi-r.1   100834363   outer envelope pore protein 24, chloroplastic 

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Top 50 coexpressed genes to AT5G42960 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G42960 (ath-u.5 coexpression data)

CoexMap"834310"


athAT5G42960 | Entrez gene ID : 834310      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu bdi cre sbi
Paralog 10 2 3 2 2 2 1 2 1 2 3 3 1 2 3 1 1 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0034765 [list] [network] regulation of monoatomic ion transmembrane transport  (14 genes)  ISS  
GO CC
GO:0046930 [list] [network] pore complex  (2 genes)  ISS  
GO:0034426 [list] [network] etioplast membrane  (4 genes)  ISS  
GO:0009707 [list] [network] chloroplast outer membrane  (46 genes)  ISS  
GO:0009941 [list] [network] chloroplast envelope  (585 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA  
GO:0009536 [list] [network] plastid  (5443 genes)  HDA  
GO MF
GO:0015288 [list] [network] porin activity  (5 genes)  ISS  
GO:0022843 [list] [network] voltage-gated monoatomic cation channel activity  (25 genes)  ISS  
Protein NP_568618.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 2,  cyto 1,  cysk_nucl 1  (predict for NP_568618.1)
Subcellular
localization
TargetP
other 9  (predict for NP_568618.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G42960
ath-r.7
for
AT5G42960
ath-m.9
for
AT5G42960
ath-e.2
for
AT5G42960
ath-m.4.bio
for
AT5G42960
ath-m.4.hor
for
AT5G42960
ath-m.4.lig
for
AT5G42960
ath-m.4.str
for
AT5G42960
ath-m.4.tis
for
AT5G42960
ath-u.5
for
AT1G45170
bra-r.6
for
103828001
bra-r.6
for
103848571
bna-r.1
for
106430399
bna-r.1
for
106431740
bna-r.1
for
106396390
ghi-r.1
for
107905415
ghi-r.1
for
107938887
cit-r.1
for
102617585
cit-r.1
for
102628989
gma-u.5
for
100802815
gma-u.5
for
100812098
vvi-u.5
for
100259086
ppo-u.5
for
18096576
ppo-u.5
for
7463399
mtr-u.5
for
25482115
sly-u.5
for
101255988
sly-u.5
for
101055526
sot-r.1
for
102586359
sot-r.1
for
102584345
sot-r.1
for
102595398
nta-r.1
for
107771415
nta-r.1
for
107832248
nta-r.1
for
107810257
osa-u.5
for
4334833
zma-u.5
for
100382679
zma-u.5
for
542205
tae-r.2
for
123087498
tae-r.2
for
123114439
tae-r.2
for
123123941
hvu-r.1
for
123395206
bdi-r.1
for
100834363


Ortholog ID: 3983
Species ath ath bra bra bna bna bna ghi ghi cit cit gma gma vvi ppo ppo mtr sly sly sot sot sot nta nta nta osa zma zma tae tae tae hvu bdi
Symbol AT5G42960 AT1G45170 LOC103828001 LOC103848571 LOC106430399 LOC106396390 LOC106349540 LOC107938887 LOC107957570 LOC102617585 LOC102628989 LOC100812098 LOC100785739 LOC100259086 LOC18096576 LOC7463399 LOC25482115 LOC101255988 LOC101055526 LOC102586359 LOC102584345 LOC102595398 LOC107771415 LOC107797571 LOC107789365 LOC4334833 LOC100382679 LOC542205 LOC123087498 LOC123114439 LOC123123941 LOC123395206 LOC100834363
Function* outer envelope pore 24B-like protein outer envelope pore 24B-like protein outer envelope pore protein 24B, chloroplastic outer envelope pore protein 24B, chloroplastic outer envelope pore protein 24B, chloroplastic outer envelope pore protein 24B, chloroplastic outer envelope pore protein 24B, chloroplastic outer envelope pore protein 24A, chloroplastic outer envelope pore protein 24B, chloroplastic outer envelope pore protein 24A, chloroplastic outer envelope pore protein 24B, chloroplastic outer envelope pore protein 24B, chloroplastic-like uncharacterized LOC100785739 outer envelope pore protein 24B, chloroplastic outer envelope pore protein 24A, chloroplastic outer envelope pore protein 24A, chloroplastic outer envelope pore protein 24, chloroplastic outer envelope pore protein 24A, chloroplastic Hop-interacting protein THI045 outer envelope pore protein 24, chloroplastic-like outer envelope pore protein 24A, chloroplastic outer envelope pore protein 24A, chloroplastic-like outer envelope pore protein 24B, chloroplastic-like outer envelope pore protein 24B, chloroplastic outer envelope pore protein 24B, chloroplastic-like outer envelope pore protein 24, chloroplastic-like Outer envelope pore protein 24A chloroplastic Outer envelope pore protein 24A chloroplastic outer envelope pore protein 24, chloroplastic outer envelope pore protein 24, chloroplastic outer envelope pore protein 24, chloroplastic outer envelope pore protein 24, chloroplastic-like outer envelope pore protein 24, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 4
bra00290 Valine, leucine and isoleucine biosynthesis 3
bra00770 Pantothenate and CoA biosynthesis 3
bra01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 4
ghi03010 Ribosome 2
ghi04075 Plant hormone signal transduction 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
cit00230 Purine metabolism 3
cit01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 6
ppo03015 mRNA surveillance pathway 2
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 6
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 5
mtr00860 Porphyrin metabolism 4
mtr00190 Oxidative phosphorylation 4
mtr00020 Citrate cycle (TCA cycle) 2
mtr00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 5
sly01200 Carbon metabolism 4
sly00670 One carbon pool by folate 4
sly00270 Cysteine and methionine metabolism 3
sly01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 6
sot00020 Citrate cycle (TCA cycle) 4
sot00620 Pyruvate metabolism 4
sot00630 Glyoxylate and dicarboxylate metabolism 4
sot00710 Carbon fixation by Calvin cycle 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00010 Glycolysis / Gluconeogenesis 3
sot01200 Carbon metabolism 3
sot01230 Biosynthesis of amino acids 3
sot00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00261 Monobactam biosynthesis 2
nta00300 Lysine biosynthesis 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 10
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 5
nta00941 Flavonoid biosynthesis 5
nta00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 5
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 9
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
nta00941 Flavonoid biosynthesis 4
nta00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 4
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 4
osa01240 Biosynthesis of cofactors 3
osa01200 Carbon metabolism 3
osa00785 Lipoic acid metabolism 2
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 4
zma00710 Carbon fixation by Calvin cycle 4
zma01200 Carbon metabolism 4
zma00030 Pentose phosphate pathway 3
zma01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 6
tae04141 Protein processing in endoplasmic reticulum 6
tae04145 Phagosome 6
tae00220 Arginine biosynthesis 3
tae01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 6
tae04141 Protein processing in endoplasmic reticulum 6
tae04145 Phagosome 6
tae00220 Arginine biosynthesis 2
tae01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 5
tae04141 Protein processing in endoplasmic reticulum 5
tae04145 Phagosome 5
tae00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00250 Alanine, aspartate and glutamate metabolism 2
hvu03015 mRNA surveillance pathway 2
hvu01240 Biosynthesis of cofactors 2
hvu00190 Oxidative phosphorylation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834310 841085 103828001 103848571 106430399 106396390 106349540 107938887 107957570 102617585 102628989 100812098 100785739 100259086 18096576 7463399 25482115 101255988 101055526 102586359 102584345 102595398 107771415 107797571 107789365 4334833 100382679 542205 123087498 123114439 123123941 123395206 100834363
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