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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   PPOX   pyridoxin (pyrodoxamine) 5'-phosphate oxidase 
 ath-r.7   PPOX   pyridoxin (pyrodoxamine) 5'-phosphate oxidase 
 ath-m.9   PPOX   pyridoxin (pyrodoxamine) 5'-phosphate oxidase 
 ath-e.2   PPOX   pyridoxin (pyrodoxamine) 5'-phosphate oxidase 
 ath-m.4.bio   PPOX   pyridoxin (pyrodoxamine) 5'-phosphate oxidase 
 ath-m.4.hor   PPOX   pyridoxin (pyrodoxamine) 5'-phosphate oxidase 
 ath-m.4.lig   PPOX   pyridoxin (pyrodoxamine) 5'-phosphate oxidase 
 ath-m.4.str   PPOX   pyridoxin (pyrodoxamine) 5'-phosphate oxidase 
 ath-m.4.tis   PPOX   pyridoxin (pyrodoxamine) 5'-phosphate oxidase 
 bra-r.6   103858426   pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic 
 bna-r.1   106388489   pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic-like 
 bna-r.1   111214078   pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic 
 ghi-r.1   107957526   pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic 
 ghi-r.1   107900746   pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic 
 cit-r.1   102608589   pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic 
 gma-u.5   100795497   pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic 
 vvi-u.5   100267813   pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic 
 ppo-u.5   7467185   pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic 
 mtr-u.5   11434240   pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic 
 sly-u.5   101258934   pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic 
 sot-r.1   102580598   pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic-like 
 nta-r.1   107806353   pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic 
 nta-r.1   107759856   pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic-like 
 osa-u.5   4348496   pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic 
 zma-u.5   100381809   Pyridoxine/pyridoxamine 5'-phosphate oxidase 1 chloroplastic 
 tae-r.2   123144910   pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic 
 tae-r.2   123137560   pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic 
 tae-r.2   123127805   pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic 
 hvu-r.1   123401606   pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic 
 bdi-r.1   100827801   pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic 
 cre-r.1   CHLRE_08g378200v5   uncharacterized protein 

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Top 50 coexpressed genes to PPOX (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PPOX (ath-u.5 coexpression data)

CoexMap"835061"


athPPOX | Entrez gene ID : 835061      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu bdi cre sbi
Paralog 9 1 2 2 1 1 1 1 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00750 [list] [network] Vitamin B6 metabolism (15 genes)
GO BP
GO:0042817 [list] [network] pyridoxal metabolic process  (2 genes)  IGI  
GO:0019674 [list] [network] NAD+ metabolic process  (9 genes)  IMP  
GO:0006739 [list] [network] NADP+ metabolic process  (29 genes)  IMP  
GO CC
GO:0005829 [list] [network] cytosol  (2593 genes)  IDA  
GO:0005576 [list] [network] extracellular region  (3158 genes)  ISM  
GO:0005739 [list] [network] mitochondrion  (4244 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  IDA  
GO:0009536 [list] [network] plastid  (5443 genes)  HDA  
GO MF
GO:0004733 [list] [network] pyridoxamine phosphate oxidase activity  (1 genes)  IDA  
GO:0052856 [list] [network] NAD(P)HX epimerase activity  (1 genes)  IDA  
GO:0010181 [list] [network] FMN binding  (17 genes)  IEA  
Protein NP_568717.2 [sequence] [blastp]
NP_974918.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  mito 1  (predict for NP_568717.2)
chlo 8,  mito 1  (predict for NP_974918.1)
Subcellular
localization
TargetP
chlo 5,  mito 3  (predict for NP_568717.2)
chlo 5,  mito 3  (predict for NP_974918.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
PPOX
ath-r.7
for
PPOX
ath-m.9
for
PPOX
ath-e.2
for
PPOX
ath-m.4.bio
for
PPOX
ath-m.4.hor
for
PPOX
ath-m.4.lig
for
PPOX
ath-m.4.str
for
PPOX
ath-m.4.tis
for
PPOX
bra-r.6
for
103858426
bna-r.1
for
106388489
bna-r.1
for
111214078
ghi-r.1
for
107957526
ghi-r.1
for
107900746
cit-r.1
for
102608589
gma-u.5
for
100795497
vvi-u.5
for
100267813
ppo-u.5
for
7467185
mtr-u.5
for
11434240
sly-u.5
for
101258934
sot-r.1
for
102580598
nta-r.1
for
107806353
nta-r.1
for
107759856
osa-u.5
for
4348496
zma-u.5
for
100381809
tae-r.2
for
123144910
tae-r.2
for
123137560
tae-r.2
for
123127805
hvu-r.1
for
123401606
bdi-r.1
for
100827801
cre-r.1
for
CHLRE_08g378200v5


Ortholog ID: 11442
Species ath bra bna bna ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu bdi cre
Symbol PPOX LOC103858426 LOC106388489 LOC111214078 LOC107957526 LOC107900746 LOC102608589 LOC100795497 LOC100267813 LOC7467185 LOC11434240 LOC101258934 LOC102580598 LOC107806353 LOC107759856 LOC4348496 LOC100381809 LOC123144910 LOC123137560 LOC123127805 LOC123401606 LOC100827801 CHLRE_08g378200v5
Function* pyridoxin (pyrodoxamine) 5'-phosphate oxidase pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic-like pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic-like pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic-like pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic Pyridoxine/pyridoxamine 5'-phosphate oxidase 1 chloroplastic pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 3
ath00630 Glyoxylate and dicarboxylate metabolism 3
ath01200 Carbon metabolism 3
ath04146 Peroxisome 2
ath00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 3
bra04142 Lysosome 2
bra04145 Phagosome 2
bra04075 Plant hormone signal transduction 2
bra00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 5
bna01240 Biosynthesis of cofactors 3
bna00750 Vitamin B6 metabolism 2
bna00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 5
bna00750 Vitamin B6 metabolism 2
bna00760 Nicotinate and nicotinamide metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 3
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi00750 Vitamin B6 metabolism 2
ghi00514 Other types of O-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 3
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi00750 Vitamin B6 metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 4
gma01230 Biosynthesis of amino acids 3
gma00906 Carotenoid biosynthesis 3
gma00270 Cysteine and methionine metabolism 2
gma00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00520 Amino sugar and nucleotide sugar metabolism 3
vvi01250 Biosynthesis of nucleotide sugars 3
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00010 Glycolysis / Gluconeogenesis 2
mtr01200 Carbon metabolism 2
mtr01230 Biosynthesis of amino acids 2
mtr01240 Biosynthesis of cofactors 2
mtr00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 2
sly00240 Pyrimidine metabolism 2
sly01232 Nucleotide metabolism 2
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00750 Vitamin B6 metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
nta00750 Vitamin B6 metabolism 2
nta00260 Glycine, serine and threonine metabolism 2
nta01200 Carbon metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 5
zma00190 Oxidative phosphorylation 3
zma00290 Valine, leucine and isoleucine biosynthesis 2
zma01210 2-Oxocarboxylic acid metabolism 2
zma00340 Histidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00480 Glutathione metabolism 6
tae00270 Cysteine and methionine metabolism 3
tae01240 Biosynthesis of cofactors 3
tae00750 Vitamin B6 metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00460 Cyanoamino acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03440 Homologous recombination 2
tae00750 Vitamin B6 metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835061 103858426 106388489 111214078 107957526 107900746 102608589 100795497 100267813 7467185 11434240 101258934 102580598 107806353 107759856 4348496 100381809 123144910 123137560 123127805 123401606 100827801 5719907
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