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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G23610   DYAD protein 
 bra-r.6   103844390   protein DYAD 
 bra-r.6   103854887   protein DYAD 
 bna-r.1   111198675   protein AMEIOTIC 1 homolog 
 bna-r.1   111215589   protein DYAD-like 
 bna-r.1   125581907   protein DYAD-like 
 ghi-r.1   107911699   protein DYAD 
 ghi-r.1   107924377   protein DYAD 
 cit-r.1   102607979   protein DYAD 
 gma-u.5   100806484   protein DYAD 
 gma-u.5   100792586   protein DYAD 
 vvi-u.5   100247650   protein AMEIOTIC 1 
 ppo-u.5   7465894   protein DYAD 
 ppo-u.5   18097752   protein DYAD 
 ppo-u.5   7491928   protein DYAD 
 mtr-u.5   25489897   protein DYAD 
 osa-u.5   4333586   protein AMEIOTIC 1 homolog 
 osa-u.5   107277282   protein AMEIOTIC 1 homolog 
 zma-u.5   103640625   Protein DYAD 
 zma-u.5   100271891   ameiotic 1 
 hvu-r.1   123452080   protein AMEIOTIC 1 homolog 
 bdi-r.1   100821373   protein DYAD 

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Top 50 coexpressed genes to AT5G23610 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G23610 (ath-u.5 coexpression data)

CoexMap"835207"


athSWI1 | Entrez gene ID : 835207      
Species ath bra bna ghi cit gma vvi ppo mtr osa zma hvu bdi sot sly nta tae cre sbi
Paralog 1 2 3 2 1 2 1 3 1 2 2 1 1 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0007065 [list] [network] male meiosis sister chromatid cohesion  (1 genes)  IMP  
GO:0007066 [list] [network] female meiosis sister chromatid cohesion  (1 genes)  IMP  
GO:0007131 [list] [network] reciprocal meiotic recombination  (44 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
Protein NP_001332209.1 [sequence] [blastp]
NP_568757.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 3,  chlo_mito 3  (predict for NP_001332209.1)
chlo 4,  nucl 4,  mito 1  (predict for NP_568757.2)
Subcellular
localization
TargetP
other 3  (predict for NP_001332209.1)
chlo 5,  other 4  (predict for NP_568757.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G23610
bra-r.6
for
103844390
bra-r.6
for
103854887
bna-r.1
for
111198675
bna-r.1
for
111215589
bna-r.1
for
125581907
ghi-r.1
for
107911699
ghi-r.1
for
107924377
cit-r.1
for
102607979
gma-u.5
for
100806484
gma-u.5
for
100792586
vvi-u.5
for
100247650
ppo-u.5
for
7465894
ppo-u.5
for
18097752
ppo-u.5
for
7491928
mtr-u.5
for
25489897
osa-u.5
for
4333586
osa-u.5
for
107277282
zma-u.5
for
103640625
zma-u.5
for
100271891
hvu-r.1
for
123452080
bdi-r.1
for
100821373


Ortholog ID: 2939
Species ath bra bra bra bna bna bna ghi ghi cit gma gma vvi ppo ppo ppo mtr osa osa zma zma hvu bdi
Symbol AT5G23610 LOC103844390 LOC103854887 LOC103852155 LOC125581907 LOC106348316 LOC106428470 LOC107911699 LOC107924377 LOC102607979 LOC100806484 LOC100792586 LOC100247650 LOC7465894 LOC18097752 LOC7491928 LOC25489897 LOC4333586 LOC107277282 LOC103640625 LOC100271891 LOC123452080 LOC100821373
Function* DYAD protein protein DYAD protein DYAD protein DYAD protein DYAD-like protein AMEIOTIC 1 homolog protein AMEIOTIC 1 homolog protein DYAD protein DYAD protein DYAD protein DYAD protein DYAD protein AMEIOTIC 1 protein DYAD protein DYAD protein DYAD protein DYAD protein AMEIOTIC 1 homolog protein AMEIOTIC 1 homolog Protein DYAD ameiotic 1 protein AMEIOTIC 1 homolog protein DYAD
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 4
bra00071 Fatty acid degradation 2
bra00592 alpha-Linolenic acid metabolism 2
bra01040 Biosynthesis of unsaturated fatty acids 2
bra01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03250 Viral life cycle - HIV-1 4
bna00562 Inositol phosphate metabolism 2
bna04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 2
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 6
ghi03420 Nucleotide excision repair 6
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 6
ghi03420 Nucleotide excision repair 6
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
cit03015 mRNA surveillance pathway 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
mtr00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 3
zma04141 Protein processing in endoplasmic reticulum 2
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00310 Lysine degradation 3
hvu04016 MAPK signaling pathway - plant 3
hvu04075 Plant hormone signal transduction 3
hvu00010 Glycolysis / Gluconeogenesis 2
hvu00620 Pyruvate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832427 103844390 103854887 103852155 125581907 106348316 106428470 107911699 107924377 102607979 100806484 100792586 100247650 7465894 18097752 7491928 25489897 4333586 107277282 103640625 100271891 123452080 100821373
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