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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   USP   UDP-sugar pyrophosphorylase 
 ath-r.7   USP   UDP-sugar pyrophosphorylase 
 ath-m.9   USP   UDP-sugar pyrophosphorylase 
 ath-e.2   USP   UDP-sugar pyrophosphorylase 
 ath-m.4.bio   USP   UDP-sugar pyrophosphorylase 
 ath-m.4.hor   USP   UDP-sugar pyrophosphorylase 
 ath-m.4.lig   USP   UDP-sugar pyrophosphorylase 
 ath-m.4.str   USP   UDP-sugar pyrophosphorylase 
 ath-m.4.tis   USP   UDP-sugar pyrophosphorylase 
 gma-u.5   USP1   UDP-sugar pyrophosphorylase 
 gma-u.5   100793599   UDP-sugar pyrophosphorylase 1 
 vvi-u.5   100259254   UDP-sugar pyrophosphorylase 
 ppo-u.5   7467856   UDP-sugar pyrophosphorylase 
 mtr-u.5   25489712   UDP-sugar pyrophospharylase 
 sly-u.5   101247010   UDP-sugar pyrophosphorylase 
 osa-u.5   4341967   UDP-sugar pyrophosphorylase-like 
 zma-u.5   100382378   UDP-sugar pyrophosphorylase 
 zma-u.5   100285949   uncharacterized LOC100285949 

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Top 50 coexpressed genes to USP (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to USP (ath-u.5 coexpression data)

CoexMap"835333"


athUSP | Entrez gene ID : 835333      
Species ath gma vvi ppo mtr sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 9 2 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00040 [list] [network] Pentose and glucuronate interconversions (108 genes)
ath00052 [list] [network] Galactose metabolism (56 genes)
ath00053 [list] [network] Ascorbate and aldarate metabolism (62 genes)
ath00520 [list] [network] Amino sugar and nucleotide sugar metabolism (124 genes)
ath00541 [list] [network] Biosynthesis of various nucleotide sugars (30 genes)
ath01250 [list] [network] Biosynthesis of nucleotide sugars (101 genes)
GO BP
GO:0052573 [list] [network] UDP-D-galactose metabolic process  (1 genes)  IDA  
GO:0006011 [list] [network] UDP-alpha-D-glucose metabolic process  (4 genes)  IDA  
GO:0033356 [list] [network] UDP-L-arabinose metabolic process  (4 genes)  IMP  
GO:0046398 [list] [network] UDP-glucuronate metabolic process  (5 genes)  IDA  
GO:0009226 [list] [network] nucleotide-sugar biosynthetic process  (16 genes)  IMP  
GO:0009555 [list] [network] pollen development  (385 genes)  IMP  
GO CC
GO:0090406 [list] [network] pollen tube  (111 genes)  IDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
GO:0010491 [list] [network] UTP:arabinose-1-phosphate uridylyltransferase activity  (1 genes)  IDA  
GO:0047338 [list] [network] UTP:xylose-1-phosphate uridylyltransferase activity  (1 genes)  IDA  
GO:0047350 [list] [network] glucuronate-1-phosphate uridylyltransferase activity  (1 genes)  IDA  
GO:0017103 [list] [network] UTP:galactose-1-phosphate uridylyltransferase activity  (2 genes)  IDA  
GO:0003983 [list] [network] UTP:glucose-1-phosphate uridylyltransferase activity  (3 genes)  IDA  
GO:0051748 [list] [network] UTP-monosaccharide-1-phosphate uridylyltransferase activity  (4 genes)  ISS  
Protein NP_568775.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 2,  nucl 1,  cysk 1,  golg 1,  nucl_plas 1  (predict for NP_568775.1)
Subcellular
localization
TargetP
scret 4,  other 4  (predict for NP_568775.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
USP

.
ath-r.7
for
USP

.
ath-m.9
for
USP

.
ath-e.2
for
USP

.
ath-m.4.bio
for
USP

.
ath-m.4.hor
for
USP

.
ath-m.4.lig
for
USP

.
ath-m.4.str
for
USP

.
ath-m.4.tis
for
USP

.
gma-u.5
for
USP1

.
gma-u.5
for
100793599

.
vvi-u.5
for
100259254

.
ppo-u.5
for
7467856

.
mtr-u.5
for
25489712

.
sly-u.5
for
101247010

.
osa-u.5
for
4341967

.
zma-u.5
for
100382378

.
zma-u.5
for
100285949

.


Ortholog ID: 8196
Species ath gma gma sly osa zma zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol USP USP1 LOC100793599 LOC101247010 LOC4341967 LOC100382378 LOC100285949 LOC103842186 LOC100259254 LOC7467856 LOC25489712 LOC123163925 LOC123148643 LOC123413667 LOC107938693 LOC121219978 LOC106368564 LOC106415929 CHLRE_14g621751v5 LOC8065566 LOC102596087 LOC102628031 LOC100845164 LOC107804078 LOC107808766
Function* UDP-sugar pyrophosphorylase UDP-sugar pyrophosphorylase UDP-sugar pyrophosphorylase 1 UDP-sugar pyrophosphorylase UDP-sugar pyrophosphorylase-like UDP-sugar pyrophosphorylase uncharacterized LOC100285949 UDP-sugar pyrophosphorylase UDP-sugar pyrophosphorylase UDP-sugar pyrophosphorylase UDP-sugar pyrophospharylase UDP-sugar pyrophosphorylase-like UDP-sugar pyrophosphorylase UDP-sugar pyrophosphorylase UDP-sugar pyrophosphorylase UDP-sugar pyrophosphorylase UDP-sugar pyrophosphorylase UDP-sugar pyrophosphorylase uncharacterized protein UDP-sugar pyrophosphorylase UDP-sugar pyrophosphorylase UDP-sugar pyrophosphorylase UDP-sugar pyrophosphorylase UDP-sugar pyrophosphorylase UDP-sugar pyrophosphorylase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00520 Amino sugar and nucleotide sugar metabolism 4
ath04141 Protein processing in endoplasmic reticulum 3
ath00052 Galactose metabolism 2
ath01250 Biosynthesis of nucleotide sugars 2
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00520 Amino sugar and nucleotide sugar metabolism 7
gma01250 Biosynthesis of nucleotide sugars 7
gma00052 Galactose metabolism 6
gma00500 Starch and sucrose metabolism 5
gma00541 Biosynthesis of various nucleotide sugars 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00052 Galactose metabolism 5
gma00520 Amino sugar and nucleotide sugar metabolism 5
gma01250 Biosynthesis of nucleotide sugars 5
gma00010 Glycolysis / Gluconeogenesis 3
gma00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00620 Pyruvate metabolism 4
sly01200 Carbon metabolism 4
sly00640 Propanoate metabolism 3
sly01240 Biosynthesis of cofactors 2
sly00061 Fatty acid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00564 Glycerophospholipid metabolism 3
osa00562 Inositol phosphate metabolism 2
osa00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 3
zma00052 Galactose metabolism 3
zma00053 Ascorbate and aldarate metabolism 3
zma00520 Amino sugar and nucleotide sugar metabolism 3
zma00541 Biosynthesis of various nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 5
bra00100 Steroid biosynthesis 3
bra00052 Galactose metabolism 2
bra00520 Amino sugar and nucleotide sugar metabolism 2
bra01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00520 Amino sugar and nucleotide sugar metabolism 3
vvi01250 Biosynthesis of nucleotide sugars 3
vvi00010 Glycolysis / Gluconeogenesis 3
vvi00500 Starch and sucrose metabolism 2
vvi00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 9
ppo01230 Biosynthesis of amino acids 8
ppo00010 Glycolysis / Gluconeogenesis 7
ppo00620 Pyruvate metabolism 3
ppo00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 3
mtr04145 Phagosome 3
mtr04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00900 Terpenoid backbone biosynthesis 5
tae00280 Valine, leucine and isoleucine degradation 4
tae00310 Lysine degradation 4
tae00380 Tryptophan metabolism 4
tae00620 Pyruvate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00900 Terpenoid backbone biosynthesis 6
tae01200 Carbon metabolism 6
tae01240 Biosynthesis of cofactors 6
tae00280 Valine, leucine and isoleucine degradation 5
tae00310 Lysine degradation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00040 Pentose and glucuronate interconversions 2
hvu00220 Arginine biosynthesis 2
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00040 Pentose and glucuronate interconversions 2
ghi00052 Galactose metabolism 2
ghi00053 Ascorbate and aldarate metabolism 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi00541 Biosynthesis of various nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 5
ghi00020 Citrate cycle (TCA cycle) 3
ghi01200 Carbon metabolism 3
ghi00040 Pentose and glucuronate interconversions 2
ghi00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 6
bna04382 Cornified envelope formation 6
bna00280 Valine, leucine and isoleucine degradation 4
bna00650 Butanoate metabolism 4
bna00900 Terpenoid backbone biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 6
bna04382 Cornified envelope formation 6
bna00280 Valine, leucine and isoleucine degradation 3
bna00650 Butanoate metabolism 3
bna00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 5
bdi03040 Spliceosome 3
bdi04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 6
nta00920 Sulfur metabolism 2
nta00510 N-Glycan biosynthesis 2
nta03060 Protein export 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 6
nta00920 Sulfur metabolism 2
nta00510 N-Glycan biosynthesis 2
nta03060 Protein export 2
nta00040 Pentose and glucuronate interconversions 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835333 778158 100793599 101247010 4341967 100382378 100285949 103842186 100259254 7467856 25489712 123163925 123148643 123413667 107938693 121219978 106368564 106415929 5715910 8065566 102596087 102628031 100845164 107804078 107808766
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