Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G52780   transmembrane protein, putative (DUF3464) 
 ath-r.7   AT5G52780   transmembrane protein, putative (DUF3464) 
 ath-m.9   AT5G52780   transmembrane protein, putative (DUF3464) 
 ath-e.2   AT5G52780   transmembrane protein, putative (DUF3464) 
 ath-m.4.bio   AT5G52780   transmembrane protein, putative (DUF3464) 
 ath-m.4.hor   AT5G52780   transmembrane protein, putative (DUF3464) 
 ath-m.4.lig   AT5G52780   transmembrane protein, putative (DUF3464) 
 ath-m.4.str   AT5G52780   transmembrane protein, putative (DUF3464) 
 ath-m.4.tis   AT5G52780   transmembrane protein, putative (DUF3464) 
 bra-r.6   103852079   uncharacterized protein PAM68-like 
 bna-r.1   BNACNNG18230D   uncharacterized protein PAM68-like 
 bna-r.1   106391554   uncharacterized protein PAM68-like 
 cit-r.1   102626557   hypothetical protein 
 gma-u.5   100782877   uncharacterized LOC100782877 
 vvi-u.5   100266405   uncharacterized protein PAM68-like 
 ppo-u.5   7468347   uncharacterized protein PAM68-like 
 mtr-u.5   25496484   uncharacterized protein PAM68-like 
 sly-u.5   101259028   uncharacterized protein PAM68-like 
 sot-r.1   102602569   uncharacterized protein PAM68-like 
 nta-r.1   107806308   uncharacterized protein PAM68-like 
 nta-r.1   142181840   uncharacterized protein PAM68-like 
 zma-u.5   100285356   ABC-type Co2+ transport system, permease component 
 tae-r.2   123049347   protein PAM68, chloroplastic 
 tae-r.2   123123479   protein PAM68, chloroplastic-like 
 hvu-r.1   123435427   protein PAM68, chloroplastic-like 
 sbi-r.1   110429552   uncharacterized protein PAM68-like 
 bdi-r.1   100846017   uncharacterized protein PAM68-like 

close


Top 50 coexpressed genes to AT5G52780 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT5G52780 (ath-u.5 coexpression data)

CoexMap"835355"


athAT5G52780 | Entrez gene ID : 835355      
Species ath bra bna cit gma vvi ppo mtr sly sot nta zma tae hvu sbi bdi cre osa ghi
Paralog 9 1 2 1 1 1 1 1 1 1 2 1 2 1 1 1 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010258 [list] [network] NADH dehydrogenase complex (plastoquinone) assembly  (8 genes)  IMP  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (314 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA ISM  
GO MF
Protein NP_200090.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1  (predict for NP_200090.1)
Subcellular
localization
TargetP
mito 8,  chlo 4  (predict for NP_200090.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G52780
ath-r.7
for
AT5G52780
ath-m.9
for
AT5G52780
ath-e.2
for
AT5G52780
ath-m.4.bio
for
AT5G52780
ath-m.4.hor
for
AT5G52780
ath-m.4.lig
for
AT5G52780
ath-m.4.str
for
AT5G52780
ath-m.4.tis
for
AT5G52780
bra-r.6
for
103852079
bna-r.1
for
BNACNNG18230D
bna-r.1
for
106391554
cit-r.1
for
102626557
gma-u.5
for
100782877
vvi-u.5
for
100266405
ppo-u.5
for
7468347
mtr-u.5
for
25496484
sly-u.5
for
101259028
sot-r.1
for
102602569
nta-r.1
for
107806308
nta-r.1
for
142181840
zma-u.5
for
100285356
tae-r.2
for
123049347
tae-r.2
for
123123479
hvu-r.1
for
123435427
sbi-r.1
for
110429552
bdi-r.1
for
100846017


Ortholog ID: 10994
Species ath bra bna bna cit gma vvi ppo mtr sly sot nta nta zma tae tae hvu sbi bdi
Symbol AT5G52780 LOC103852079 BNACNNG18230D LOC106391554 LOC102626557 LOC100782877 LOC100266405 LOC7468347 LOC25496484 LOC101259028 LOC102602569 LOC107806308 LOC142181840 LOC100285356 LOC123123479 LOC123181411 LOC123435427 LOC110429552 LOC100846017
Function* transmembrane protein, putative (DUF3464) uncharacterized protein PAM68-like uncharacterized protein PAM68-like uncharacterized protein PAM68-like hypothetical protein uncharacterized LOC100782877 uncharacterized protein PAM68-like uncharacterized protein PAM68-like uncharacterized protein PAM68-like uncharacterized protein PAM68-like uncharacterized protein PAM68-like uncharacterized protein PAM68-like uncharacterized protein PAM68-like ABC-type Co2+ transport system, permease component protein PAM68, chloroplastic-like uncharacterized protein PAM68-like protein PAM68, chloroplastic-like uncharacterized protein PAM68-like uncharacterized protein PAM68-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00030 Pentose phosphate pathway 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 2
sot00710 Carbon fixation by Calvin cycle 2
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00790 Folate biosynthesis 3
tae01240 Biosynthesis of cofactors 3
tae04122 Sulfur relay system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00790 Folate biosynthesis 3
tae01240 Biosynthesis of cofactors 3
tae04122 Sulfur relay system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00710 Carbon fixation by Calvin cycle 5
bdi01200 Carbon metabolism 5
bdi00630 Glyoxylate and dicarboxylate metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835355 103852079 106406726 106391554 102626557 100782877 100266405 7468347 25496484 101259028 102602569 107806308 142181840 100285356 123123479 123181411 123435427 110429552 100846017
The preparation time of this page was 0.1 [sec].