ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-u.5	AT5G52990	SNARE-like superfamily protein
ath-r.7	AT5G52990	SNARE-like superfamily protein
ath-e.2	AT5G52990	SNARE-like superfamily protein
ath-u.5	AT4G27840	SNARE-like superfamily protein
gma-u.5	100780306	phytolongin Phyl2.2
gma-u.5	100808430	phytolongin Phyl2.2
vvi-u.5	100262242	phytolongin Phyl2.2
ppo-u.5	7475182	phytolongin Phyl2.2
ppo-u.5	7464278	phytolongin Phyl2.2
mtr-u.5	11425191	phytolongin Phyl2.2
sly-u.5	101259516	phytolongin Phyl2.1

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

NP_200111.1 [sequence] [blastp]

Subcellular
localization
wolf

extr 3, cyto 2, vacu 2, chlo 1, mito 1, plas 1, E.R. 1, chlo_mito 1, E.R._plas 1, mito_plas 1

(predict for NP_200111.1)

Subcellular
localization
TargetP

scret 5

(predict for NP_200111.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for AT5G52990	ath-r.7 for AT5G52990	ath-e.2 for AT5G52990	ath-u.5 for AT4G27840	gma-u.5 for 100780306	gma-u.5 for 100808430	vvi-u.5 for 100262242	ppo-u.5 for 7475182	ppo-u.5 for 7464278	mtr-u.5 for 11425191	sly-u.5 for 101259516

Ortholog ID: 10885

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

Symbol

Function^*

SNARE-like superfamily protein

phytolongin Phyl2.2-like

phytolongin Phyl2.2

phytolongin Phyl2.1

probable VAMP-like protein At1g33475

phytolongin Phyl2.2-like

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	6
ath03060	Protein export	3
ath04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03015	mRNA surveillance pathway	3
ath04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04016	MAPK signaling pathway - plant	8
ppo04075	Plant hormone signal transduction	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04626	Plant-pathogen interaction	2
nta04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	4

Expression

Expression pattern

Entrez Gene ID^*

835378

828897

103852066

103844778

106354753

106413157

107929618

107947238

102630319

100780306

100808430

100262242

7464278

7475182

11425191

101259516

102599714

107780739

107826159

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to AT5G52990 (ath-u.5 coexpression data)

Top 50 enrichment test to AT5G52990 (ath-u.5 coexpression data)


Species	ath	gma	vvi	ppo	mtr	sly	bdi	hvu	bra	cit	bna	sbi	ghi	osa	sot	nta	cre	tae	zma
Paralog	4	2	1	2	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT5G52990 (ath-u.5 coexpression data)

Top 50 enrichment test to AT5G52990 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**