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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   SVL4   SHV3-like 4 
 ath-r.7   SVL4   SHV3-like 4 
 ath-m.9   SVL4   SHV3-like 4 
 ath-e.2   SVL4   SHV3-like 4 
 ath-m.4.bio   SVL4   SHV3-like 4 
 ath-m.4.hor   SVL4   SHV3-like 4 
 ath-m.4.lig   SVL4   SHV3-like 4 
 ath-m.4.str   SVL4   SHV3-like 4 
 ath-m.4.tis   SVL4   SHV3-like 4 
 ath-u.5   SVL5   SHV3-like 5 
 gma-u.5   100802517   glycerophosphodiester phosphodiesterase GDPDL6 
 gma-u.5   100782575   glycerophosphodiester phosphodiesterase GDPDL6 
 gma-u.5   100794640   glycerophosphodiester phosphodiesterase GDPDL6 
 sly-u.5   101263065   glycerophosphodiester phosphodiesterase GDPDL6-like 
 sly-u.5   101262463   glycerophosphodiester phosphodiesterase GDPDL6-like 
 osa-u.5   4328548   glycerophosphodiester phosphodiesterase GDPDL7 
 zma-u.5   100304242   uncharacterized LOC100304242 
 zma-u.5   103626746   glycerophosphodiester phosphodiesterase GDPDL7 

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Top 50 coexpressed genes to SVL4 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to SVL4 (ath-u.5 coexpression data)

CoexMap"835917"


athSVL4 | Entrez gene ID : 835917      
Species ath gma sly osa zma ppo hvu mtr sot vvi tae nta bra cit ghi bna bdi sbi cre
Paralog 10 3 2 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009860 [list] [network] pollen tube growth  (151 genes)  IGI  
GO:0048868 [list] [network] pollen tube development  (225 genes)  IGI  
GO:0006629 [list] [network] lipid metabolic process  (666 genes)  IEA  
GO CC
GO:0016020 [list] [network] membrane  (3740 genes)  TAS  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
GO:0016301 [list] [network] kinase activity  (1055 genes)  ISS  
Protein NP_200613.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  plas 1,  nucl_plas 1  (predict for NP_200613.2)
Subcellular
localization
TargetP
scret 3  (predict for NP_200613.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
SVL4

.
ath-r.7
for
SVL4

.
ath-m.9
for
SVL4

.
ath-e.2
for
SVL4

.
ath-m.4.bio
for
SVL4

.
ath-m.4.hor
for
SVL4

.
ath-m.4.lig
for
SVL4

.
ath-m.4.str
for
SVL4

.
ath-m.4.tis
for
SVL4

.
ath-u.5
for
SVL5

.
gma-u.5
for
100802517

.
gma-u.5
for
100782575

.
gma-u.5
for
100794640

.
sly-u.5
for
101263065

.
sly-u.5
for
101262463

.
osa-u.5
for
4328548

.
zma-u.5
for
100304242

.
zma-u.5
for
103626746

.


Ortholog ID: 3850
Species ath ath gma gma sly sly osa zma zma bra tae tae hvu hvu ghi ghi bna bna sbi sbi cit bdi bdi nta nta
Symbol SVL4 SVL5 LOC100794640 LOC100802517 LOC101262463 LOC101263065 LOC4328548 LOC100304242 LOC103626746 LOC103845242 LOC123136839 LOC123141987 LOC123406128 LOC123448557 LOC107906914 LOC107958924 LOC106407985 LOC106386244 LOC8058389 LOC8079427 LOC102623828 LOC100827169 LOC100841824 LOC107782162 LOC107821252
Function* SHV3-like 4 SHV3-like 5 glycerophosphodiester phosphodiesterase GDPDL6 glycerophosphodiester phosphodiesterase GDPDL6 glycerophosphodiester phosphodiesterase GDPDL6-like glycerophosphodiester phosphodiesterase GDPDL6-like glycerophosphodiester phosphodiesterase GDPDL7 uncharacterized LOC100304242 glycerophosphodiester phosphodiesterase GDPDL7 glycerophosphodiester phosphodiesterase GDPDL7 glycerophosphodiester phosphodiesterase GDPDL7 glycerophosphodiester phosphodiesterase GDPDL7 glycerophosphodiester phosphodiesterase GDPDL7-like glycerophosphodiester phosphodiesterase GDPDL7-like glycerophosphodiester phosphodiesterase GDPDL7 glycerophosphodiester phosphodiesterase GDPDL6 glycerophosphodiester phosphodiesterase GDPDL6-like glycerophosphodiester phosphodiesterase GDPDL7-like glycerophosphodiester phosphodiesterase GDPDL7 glycerophosphodiester phosphodiesterase GDPDL7 glycerophosphodiester phosphodiesterase GDPDL7 glycerophosphodiester phosphodiesterase GDPDL7 glycerophosphodiester phosphodiesterase GDPDL7 glycerophosphodiester phosphodiesterase GDPDL7-like glycerophosphodiester phosphodiesterase GDPDL7-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01212 Fatty acid metabolism 2
gma04075 Plant hormone signal transduction 2
gma04626 Plant-pathogen interaction 2
gma00564 Glycerophospholipid metabolism 2
gma00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00040 Pentose and glucuronate interconversions 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00040 Pentose and glucuronate interconversions 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01230 Biosynthesis of amino acids 2
sbi01200 Carbon metabolism 2
sbi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 9
nta04820 Cytoskeleton in muscle cells 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835917 835929 100794640 100802517 101262463 101263065 4328548 100304242 103626746 103845242 123136839 123141987 123406128 123448557 107906914 107958924 106407985 106386244 8058389 8079427 102623828 100827169 100841824 107782162 107821252
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