ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-u.5	AT5G58340	myb-like HTH transcriptional regulator family protein
ath-r.7	AT5G58340	myb-like HTH transcriptional regulator family protein
ath-e.2	AT5G58340	myb-like HTH transcriptional regulator family protein
gma-u.5	100791258	uncharacterized LOC100791258
gma-u.5	100811657	telomeric repeat-binding factor 2
gma-u.5	100819448	uncharacterized LOC100819448
vvi-u.5	100244907	uncharacterized LOC100244907
ppo-u.5	7464725	uncharacterized LOC7464725
mtr-u.5	112419918	uncharacterized LOC112419918
mtr-u.5	11418218	uncharacterized LOC11418218
mtr-u.5	11418225	uncharacterized LOC11418225
sly-u.5	101245372	uncharacterized LOC101245372
osa-u.5	4344404	uncharacterized LOC4344404
osa-u.5	4340310	uncharacterized LOC4340310
zma-u.5	100382581	uncharacterized LOC100382581
zma-u.5	100383782	uncharacterized LOC100383782

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

NP_001190566.1 [sequence] [blastp]
NP_200642.2 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, nucl 4, mito 1, plas 1, pero 1, mito_plas 1	(predict for NP_001190566.1)
cyto 4, nucl 4, mito 1, plas 1, pero 1, mito_plas 1	(predict for NP_200642.2)

Subcellular
localization
TargetP

other 5	(predict for NP_001190566.1)
other 5	(predict for NP_200642.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for AT5G58340	ath-r.7 for AT5G58340	ath-e.2 for AT5G58340	gma-u.5 for 100791258	gma-u.5 for 100811657	gma-u.5 for 100819448	vvi-u.5 for 100244907	ppo-u.5 for 7464725	mtr-u.5 for 112419918	mtr-u.5 for 11418218	mtr-u.5 for 11418225	sly-u.5 for 101245372	osa-u.5 for 4344404	osa-u.5 for 4340310	zma-u.5 for 100382581	zma-u.5 for 100383782

Ortholog

Ortholog ID: 3271

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

myb-like HTH transcriptional regulator family protein

uncharacterized LOC103845260

nuclear receptor corepressor 1

uncharacterized LOC106435082

uncharacterized BNAC05G46800D

uncharacterized LOC107891671

uncharacterized LOC102608364

uncharacterized LOC100777809

telomeric repeat-binding factor 2

uncharacterized LOC100244907

uncharacterized LOC7464725

uncharacterized LOC112419918

uncharacterized LOC11418218

uncharacterized LOC101245372

uncharacterized LOC102603861

uncharacterized LOC107799057

uncharacterized LOC107775036

uncharacterized LOC4344404

uncharacterized LOC4340310

uncharacterized LOC100383782

uncharacterized LOC123165456

uncharacterized LOC123411706

uncharacterized LOC110430977

uncharacterized LOC110429562

uncharacterized LOC100834855

uncharacterized LOC100830298

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00230	Purine metabolism	4
bna00240	Pyrimidine metabolism	4
bna01232	Nucleotide metabolism	4
bna04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03050	Proteasome	4
ghi03082	ATP-dependent chromatin remodeling	2
ghi03020	RNA polymerase	2
ghi03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04382	Cornified envelope formation	2
cit03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	4
mtr00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01240	Biosynthesis of cofactors	4
zma00130	Ubiquinone and other terpenoid-quinone biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00540	Lipopolysaccharide biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03013	Nucleocytoplasmic transport	5
bdi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

835946

103845260

103870865

106435082

106453011

107891671

102608364

100777809

100811657

100244907

7464725

112419918

11418218

101245372

102603861

107799057

107775036

4344404

4340310

100383782

123165456

123411706

110430977

110429562

100834855

100830298

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to AT5G58340 (ath-u.5 coexpression data)

Top 50 enrichment test to AT5G58340 (ath-u.5 coexpression data)


Species	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	3	3	1	1	3	1	2	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT5G58340 (ath-u.5 coexpression data)

Top 50 enrichment test to AT5G58340 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**