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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   PFK4   phosphofructokinase 4 
 ath-r.7   PFK4   phosphofructokinase 4 
 ath-m.9   PFK4   phosphofructokinase 4 
 ath-e.2   PFK4   phosphofructokinase 4 
 ath-m.4.bio   PFK4   phosphofructokinase 4 
 ath-m.4.hor   PFK4   phosphofructokinase 4 
 ath-m.4.lig   PFK4   phosphofructokinase 4 
 ath-m.4.str   PFK4   phosphofructokinase 4 
 ath-m.4.tis   PFK4   phosphofructokinase 4 
 ath-u.5   PFK3   phosphofructokinase 3 
 ath-u.5   PFK1   phosphofructokinase 1 
 ath-u.5   PFK6   phosphofructokinase 6 
 gma-u.5   100815278   ATP-dependent 6-phosphofructokinase 3 
 gma-u.5   100798766   ATP-dependent 6-phosphofructokinase 3 
 gma-u.5   100803139   ATP-dependent 6-phosphofructokinase 6 
 vvi-u.5   100242517   ATP-dependent 6-phosphofructokinase 4, chloroplastic 
 vvi-u.5   100243946   ATP-dependent 6-phosphofructokinase 3 
 vvi-u.5   100245746   ATP-dependent 6-phosphofructokinase 6 
 ppo-u.5   18097075   ATP-dependent 6-phosphofructokinase 4, chloroplastic 
 ppo-u.5   18107666   ATP-dependent 6-phosphofructokinase 3 
 mtr-u.5   11410489   ATP-dependent 6-phosphofructokinase 4, chloroplastic 
 mtr-u.5   11415742   ATP-dependent 6-phosphofructokinase 3 
 mtr-u.5   25490151   ATP-dependent 6-phosphofructokinase 6 
 sly-u.5   101245480   ATP-dependent 6-phosphofructokinase 6 
 sly-u.5   101266704   ATP-dependent 6-phosphofructokinase 4, chloroplastic 
 sly-u.5   101268121   ATP-dependent 6-phosphofructokinase 6 
 osa-u.5   4340153   ATP-dependent 6-phosphofructokinase 3 
 osa-u.5   4327196   ATP-dependent 6-phosphofructokinase 6 
 osa-u.5   4327301   ATP-dependent 6-phosphofructokinase 6 
 zma-u.5   103630633   ATP-dependent 6-phosphofructokinase 6 
 zma-u.5   103629493   ATP-dependent 6-phosphofructokinase 7 

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Top 50 coexpressed genes to PFK4 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PFK4 (ath-u.5 coexpression data)

CoexMap"836279"


athPFK4 | Entrez gene ID : 836279      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 12 3 3 2 3 3 3 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00010 [list] [network] Glycolysis / Gluconeogenesis (119 genes)
ath00030 [list] [network] Pentose phosphate pathway (58 genes)
ath00051 [list] [network] Fructose and mannose metabolism (62 genes)
ath00052 [list] [network] Galactose metabolism (56 genes)
ath01200 [list] [network] Carbon metabolism (275 genes)
ath01230 [list] [network] Biosynthesis of amino acids (242 genes)
ath03018 [list] [network] RNA degradation (114 genes)
GO BP
GO:0006002 [list] [network] fructose 6-phosphate metabolic process  (8 genes)  IEA  
GO:0006096 [list] [network] glycolytic process  (21 genes)  IDA  
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  IDA ISM  
GO MF
GO:0003872 [list] [network] 6-phosphofructokinase activity  (7 genes)  IDA  
Protein NP_001032120.1 [sequence] [blastp]
NP_200966.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  cyto 1  (predict for NP_001032120.1)
chlo 9,  cyto 1  (predict for NP_200966.2)
Subcellular
localization
TargetP
chlo 8  (predict for NP_001032120.1)
chlo 8  (predict for NP_200966.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
PFK4
ath-r.7
for
PFK4
ath-m.9
for
PFK4
ath-e.2
for
PFK4
ath-m.4.bio
for
PFK4
ath-m.4.hor
for
PFK4
ath-m.4.lig
for
PFK4
ath-m.4.str
for
PFK4
ath-m.4.tis
for
PFK4
ath-u.5
for
PFK3
ath-u.5
for
PFK1
ath-u.5
for
PFK6
gma-u.5
for
100815278
gma-u.5
for
100798766
gma-u.5
for
100803139
vvi-u.5
for
100242517
vvi-u.5
for
100243946
vvi-u.5
for
100245746
ppo-u.5
for
18097075
ppo-u.5
for
18107666
mtr-u.5
for
11410489
mtr-u.5
for
11415742
mtr-u.5
for
25490151
sly-u.5
for
101245480
sly-u.5
for
101266704
sly-u.5
for
101268121
osa-u.5
for
4340153
osa-u.5
for
4327196
osa-u.5
for
4327301
zma-u.5
for
103630633
zma-u.5
for
103629493


Ortholog ID: 668
Species ath ath bra bra bna bna ghi cit cit gma gma vvi vvi ppo mtr mtr sly sly sot nta nta osa osa zma tae tae hvu hvu sbi sbi bdi bdi
Symbol PFK3 PFK1 LOC103851815 LOC103860608 LOC106418226 LOC106432840 LOC107901506 LOC102616327 LOC102618905 LOC100820495 LOC100798766 LOC100242517 LOC100243946 LOC18107666 LOC11430664 LOC11410489 LOC101266704 LOC101268752 LOC102601740 LOC107781978 LOC107810931 LOC4327196 LOC4338034 LOC103630633 LOC123077433 LOC123182687 LOC123407276 LOC123442903 LOC8065903 LOC8078732 LOC100844561 LOC100846104
Function* phosphofructokinase 3 phosphofructokinase 1 ATP-dependent 6-phosphofructokinase 7-like ATP-dependent 6-phosphofructokinase 4, chloroplastic ATP-dependent 6-phosphofructokinase 7-like ATP-dependent 6-phosphofructokinase 7 ATP-dependent 6-phosphofructokinase 3 ATP-dependent 6-phosphofructokinase 6-like ATP-dependent 6-phosphofructokinase 6 ATP-dependent 6-phosphofructokinase 4, chloroplastic ATP-dependent 6-phosphofructokinase 3 ATP-dependent 6-phosphofructokinase 4, chloroplastic ATP-dependent 6-phosphofructokinase 3 ATP-dependent 6-phosphofructokinase 3 ATP-dependent 6-phosphofructokinase 7 ATP-dependent 6-phosphofructokinase 4, chloroplastic ATP-dependent 6-phosphofructokinase 4, chloroplastic ATP-dependent 6-phosphofructokinase 3-like ATP-dependent 6-phosphofructokinase 3-like ATP-dependent 6-phosphofructokinase 6 ATP-dependent 6-phosphofructokinase 4, chloroplastic ATP-dependent 6-phosphofructokinase 6 ATP-dependent 6-phosphofructokinase 6 ATP-dependent 6-phosphofructokinase 6 ATP-dependent 6-phosphofructokinase 6 ATP-dependent 6-phosphofructokinase 6 ATP-dependent 6-phosphofructokinase 6-like ATP-dependent 6-phosphofructokinase 6-like ATP-dependent 6-phosphofructokinase 6 ATP-dependent 6-phosphofructokinase 6 ATP-dependent 6-phosphofructokinase 6 ATP-dependent 6-phosphofructokinase 6
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 6
ath04144 Endocytosis 3
ath00052 Galactose metabolism 2
ath00561 Glycerolipid metabolism 2
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00010 Glycolysis / Gluconeogenesis 2
ath01200 Carbon metabolism 2
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00010 Glycolysis / Gluconeogenesis 3
bra01200 Carbon metabolism 3
bra01230 Biosynthesis of amino acids 3
bra00030 Pentose phosphate pathway 2
bra00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
bra01230 Biosynthesis of amino acids 2
bra03420 Nucleotide excision repair 2
bra00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00010 Glycolysis / Gluconeogenesis 6
bna00030 Pentose phosphate pathway 6
bna00051 Fructose and mannose metabolism 6
bna00052 Galactose metabolism 6
bna01200 Carbon metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00010 Glycolysis / Gluconeogenesis 6
bna00030 Pentose phosphate pathway 6
bna00051 Fructose and mannose metabolism 6
bna00052 Galactose metabolism 6
bna01200 Carbon metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 13
ghi01200 Carbon metabolism 13
ghi01230 Biosynthesis of amino acids 13
ghi03018 RNA degradation 7
ghi00260 Glycine, serine and threonine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00010 Glycolysis / Gluconeogenesis 3
cit00030 Pentose phosphate pathway 3
cit00051 Fructose and mannose metabolism 3
cit01200 Carbon metabolism 3
cit01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
gma03018 RNA degradation 2
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 2
gma00030 Pentose phosphate pathway 2
gma00051 Fructose and mannose metabolism 2
gma00052 Galactose metabolism 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00561 Glycerolipid metabolism 2
vvi04144 Endocytosis 2
vvi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 3
ppo01230 Biosynthesis of amino acids 3
ppo03018 RNA degradation 3
ppo03013 Nucleocytoplasmic transport 2
ppo03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 5
mtr00010 Glycolysis / Gluconeogenesis 4
mtr01230 Biosynthesis of amino acids 4
mtr00030 Pentose phosphate pathway 3
mtr00051 Fructose and mannose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
sly00052 Galactose metabolism 2
sly04626 Plant-pathogen interaction 2
sly00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 8
sly00020 Citrate cycle (TCA cycle) 6
sly01210 2-Oxocarboxylic acid metabolism 5
sly01230 Biosynthesis of amino acids 4
sly00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00010 Glycolysis / Gluconeogenesis 2
sot00030 Pentose phosphate pathway 2
sot00051 Fructose and mannose metabolism 2
sot00052 Galactose metabolism 2
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00030 Pentose phosphate pathway 2
nta00051 Fructose and mannose metabolism 2
nta00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03250 Viral life cycle - HIV-1 2
nta03272 Virion - Hepatitis viruses 2
nta04144 Endocytosis 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00010 Glycolysis / Gluconeogenesis 14
osa01200 Carbon metabolism 12
osa01230 Biosynthesis of amino acids 12
osa00051 Fructose and mannose metabolism 6
osa03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00010 Glycolysis / Gluconeogenesis 8
osa01200 Carbon metabolism 8
osa01230 Biosynthesis of amino acids 7
osa00620 Pyruvate metabolism 5
osa00030 Pentose phosphate pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00010 Glycolysis / Gluconeogenesis 11
zma01200 Carbon metabolism 7
zma01230 Biosynthesis of amino acids 7
zma00620 Pyruvate metabolism 5
zma00030 Pentose phosphate pathway 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 8
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
tae00010 Glycolysis / Gluconeogenesis 3
tae00030 Pentose phosphate pathway 3
tae00051 Fructose and mannose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 14
tae00620 Pyruvate metabolism 6
tae00071 Fatty acid degradation 4
tae00350 Tyrosine metabolism 4
tae00592 alpha-Linolenic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00071 Fatty acid degradation 2
hvu01212 Fatty acid metabolism 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00010 Glycolysis / Gluconeogenesis 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 5
sbi04075 Plant hormone signal transduction 3
sbi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 3
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00100 Steroid biosynthesis 3
bdi00480 Glutathione metabolism 2
bdi02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00010 Glycolysis / Gluconeogenesis 14
bdi01200 Carbon metabolism 11
bdi01230 Biosynthesis of amino acids 11
bdi00710 Carbon fixation by Calvin cycle 6
bdi00620 Pyruvate metabolism 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828733 829043 103851815 103860608 106418226 106432840 107901506 102616327 102618905 100820495 100798766 100242517 100243946 18107666 11430664 11410489 101266704 101268752 102601740 107781978 107810931 4327196 4338034 103630633 123077433 123182687 123407276 123442903 8065903 8078732 100844561 100846104
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