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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   RGF9   root meristem growth factor 
 ath-r.7   RGF9   root meristem growth factor 
 ath-m.9   RGF9   root meristem growth factor 
 ath-e.2   RGF9   root meristem growth factor 
 ath-m.4.bio   RGF9   root meristem growth factor 
 ath-m.4.hor   RGF9   root meristem growth factor 
 ath-m.4.lig   RGF9   root meristem growth factor 
 ath-m.4.str   RGF9   root meristem growth factor 
 ath-m.4.tis   RGF9   root meristem growth factor 
 bra-r.6   103873904   root meristem growth factor 9 
 bna-r.1   106351906   protein GOLVEN 2 
 bna-r.1   106374311   protein GOLVEN 2 
 bna-r.1   125581591   protein GOLVEN 2-like 
 mtr-u.5   11426088   uncharacterized LOC11426088 

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Top 50 coexpressed genes to RGF9 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to RGF9 (ath-u.5 coexpression data)

CoexMap"836598"


athRGF9 | Entrez gene ID : 836598      
Species ath bra bna mtr hvu sot bdi sly nta vvi osa tae ppo zma cre sbi gma ghi cit
Paralog 9 1 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009786 [list] [network] regulation of asymmetric cell division  (16 genes)  ISS  
GO:0008284 [list] [network] positive regulation of cell population proliferation  (27 genes)  IDA  
GO:0032880 [list] [network] regulation of protein localization  (29 genes)  IDA  
GO:2000023 [list] [network] regulation of lateral root development  (31 genes)  IDA  
GO:2000067 [list] [network] regulation of root morphogenesis  (33 genes)  IDA  
GO:2000012 [list] [network] regulation of auxin polar transport  (39 genes)  IMP  
GO:0009958 [list] [network] positive gravitropism  (41 genes)  IMP  
GO:0010082 [list] [network] regulation of root meristem growth  (44 genes)  IDA  
GO:2000280 [list] [network] regulation of root development  (79 genes)  IMP  
GO:0048527 [list] [network] lateral root development  (131 genes)  IMP  
GO:0009733 [list] [network] response to auxin  (344 genes)  IEP  
GO:0022622 [list] [network] root system development  (602 genes)  IMP  
GO:0030154 [list] [network] cell differentiation  (627 genes)  IDA  
GO CC
GO:0005615 [list] [network] extracellular space  (45 genes)  ISS  
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
GO:0008083 [list] [network] growth factor activity  (9 genes)  IDA  
GO:0005179 [list] [network] hormone activity  (56 genes)  IDA  
Protein NP_201282.1 [sequence] [blastp]
Subcellular
localization
wolf
vacu 4,  chlo 3,  extr 1,  mito 1,  E.R. 1  (predict for NP_201282.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_201282.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
RGF9
ath-r.7
for
RGF9
ath-m.9
for
RGF9
ath-e.2
for
RGF9
ath-m.4.bio
for
RGF9
ath-m.4.hor
for
RGF9
ath-m.4.lig
for
RGF9
ath-m.4.str
for
RGF9
ath-m.4.tis
for
RGF9
bra-r.6
for
103873904
bna-r.1
for
106351906
bna-r.1
for
106374311
bna-r.1
for
125581591
mtr-u.5
for
11426088


Ortholog ID: 19378
Species ath bra bna bna bna mtr
Symbol RGF9 LOC103873904 LOC106351906 LOC106374311 LOC125581591 LOC11426088
Function* root meristem growth factor root meristem growth factor 9 protein GOLVEN 2 protein GOLVEN 2 protein GOLVEN 2-like uncharacterized LOC11426088
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 14
bra00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00940 Phenylpropanoid biosynthesis 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836598 103873904 106351906 106374311 125581591 11426088
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