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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G65820   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-r.7   AT5G65820   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.9   AT5G65820   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-e.2   AT5G65820   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.bio   AT5G65820   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.hor   AT5G65820   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.lig   AT5G65820   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.str   AT5G65820   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.tis   AT5G65820   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-u.5   AT3G49730   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100789597   putative pentatricopeptide repeat-containing protein At5g65820 
 gma-u.5   100781204   putative pentatricopeptide repeat-containing protein At5g65820 
 vvi-u.5   100264711   putative pentatricopeptide repeat-containing protein At5g65820 
 ppo-u.5   7497279   pentatricopeptide repeat-containing protein At3g49730 
 mtr-u.5   25501572   pentatricopeptide repeat-containing protein At3g49730 
 osa-u.5   4333980   pentatricopeptide repeat-containing protein At3g49730 
 zma-u.5   103643953   pentatricopeptide repeat-containing protein At3g49730 

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Top 50 coexpressed genes to AT5G65820 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G65820 (ath-u.5 coexpression data)

CoexMap"836711"


athAT5G65820 | Entrez gene ID : 836711      
Species ath gma vvi ppo mtr osa zma hvu sot tae nta bra cit ghi bna bdi sly sbi cre
Paralog 10 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
Protein NP_201383.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 3,  cyto_nucl 3,  cyto_E.R. 3,  cyto_plas 3  (predict for NP_201383.1)
Subcellular
localization
TargetP
mito 6  (predict for NP_201383.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G65820

.
ath-r.7
for
AT5G65820

.
ath-m.9
for
AT5G65820

.
ath-e.2
for
AT5G65820

.
ath-m.4.bio
for
AT5G65820

.
ath-m.4.hor
for
AT5G65820

.
ath-m.4.lig
for
AT5G65820

.
ath-m.4.str
for
AT5G65820

.
ath-m.4.tis
for
AT5G65820

.
ath-u.5
for
AT3G49730

.
gma-u.5
for
100789597

.
gma-u.5
for
100781204

.
vvi-u.5
for
100264711

.
ppo-u.5
for
7497279

.
mtr-u.5
for
25501572

.
osa-u.5
for
4333980

.
zma-u.5
for
103643953

.


Ortholog ID: 9754
Species ath ath gma gma osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT3G49730 AT5G65820 LOC100789597 LOC100781204 LOC4333980 LOC103643953 LOC103874019 LOC100264711 LOC7497279 LOC25501572 LOC123090949 LOC123087010 LOC123451085 LOC107935260 LOC107950525 LOC106346622 LOC106347394 LOC8059963 LOC102583404 LOC102615847 LOC100824550 LOC107793504 LOC107787990
Function* Tetratricopeptide repeat (TPR)-like superfamily protein Pentatricopeptide repeat (PPR) superfamily protein putative pentatricopeptide repeat-containing protein At5g65820 putative pentatricopeptide repeat-containing protein At5g65820 pentatricopeptide repeat-containing protein At3g49730 pentatricopeptide repeat-containing protein At3g49730 putative pentatricopeptide repeat-containing protein At5g65820 putative pentatricopeptide repeat-containing protein At5g65820 pentatricopeptide repeat-containing protein At3g49730 pentatricopeptide repeat-containing protein At3g49730 pentatricopeptide repeat-containing protein At3g49730 pentatricopeptide repeat-containing protein At3g49730 pentatricopeptide repeat-containing protein At3g49730-like putative pentatricopeptide repeat-containing protein At5g65820 putative pentatricopeptide repeat-containing protein At5g65820 putative pentatricopeptide repeat-containing protein At5g65820 pentatricopeptide repeat-containing protein At3g49730 pentatricopeptide repeat-containing protein At3g49730 pentatricopeptide repeat-containing protein At3g49730-like putative pentatricopeptide repeat-containing protein At5g65820 pentatricopeptide repeat-containing protein At3g49730 putative pentatricopeptide repeat-containing protein At5g65820 putative pentatricopeptide repeat-containing protein At5g65820
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 5
osa03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04016 MAPK signaling pathway - plant 2
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 28719394 836711 100789597 100781204 4333980 103643953 103874019 100264711 7497279 25501572 123090949 123087010 123451085 107935260 107950525 106346622 106347394 8059963 102583404 102615847 100824550 107793504 107787990
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