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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT1G08050   Zinc finger (C3HC4-type RING finger) family protein 
 ath-r.7   AT1G08050   Zinc finger (C3HC4-type RING finger) family protein 
 ath-m.9   AT1G08050   Zinc finger (C3HC4-type RING finger) family protein 
 ath-e.2   AT1G08050   Zinc finger (C3HC4-type RING finger) family protein 
 ath-m.4.bio   AT1G08050   Zinc finger (C3HC4-type RING finger) family protein 
 ath-m.4.hor   AT1G08050   Zinc finger (C3HC4-type RING finger) family protein 
 ath-m.4.lig   AT1G08050   Zinc finger (C3HC4-type RING finger) family protein 
 ath-m.4.str   AT1G08050   Zinc finger (C3HC4-type RING finger) family protein 
 ath-m.4.tis   AT1G08050   Zinc finger (C3HC4-type RING finger) family protein 
 ath-u.5   AT2G38970   Zinc finger (C3HC4-type RING finger) family protein 
 ath-u.5   AT3G54780   Zinc finger (C3HC4-type RING finger) family protein 
 ath-u.5   AT5G60710   Zinc finger (C3HC4-type RING finger) family protein 
 gma-u.5   100818239   E3 ubiquitin-protein ligase WAV3 
 gma-u.5   100818406   E3 ubiquitin-protein ligase WAV3 
 gma-u.5   100813784   E3 ubiquitin-protein ligase WAV3 
 vvi-u.5   100233041   E3 ubiquitin-protein ligase WAV3 
 vvi-u.5   100253096   E3 ubiquitin-protein ligase WAV3 
 vvi-u.5   100266793   E3 ubiquitin-protein ligase WAV3 
 ppo-u.5   112326296   E3 ubiquitin-protein ligase WAV3-like 
 ppo-u.5   112328650   E3 ubiquitin-protein ligase WAV3-like 
 ppo-u.5   112328368   E3 ubiquitin-protein ligase WAV3-like 
 mtr-u.5   11410528   E3 ubiquitin-protein ligase WAV3 
 mtr-u.5   11405602   E3 ubiquitin-protein ligase WAV3 
 mtr-u.5   25487823   E3 ubiquitin-protein ligase WAV3 
 sly-u.5   101244547   E3 ubiquitin-protein ligase WAV3-like 
 sly-u.5   101250694   E3 ubiquitin-protein ligase WAV3-like 
 sly-u.5   101263576   E3 ubiquitin-protein ligase WAV3 
 zma-u.5   100382510   putative RING zinc finger and VWF domain family protein 
 zma-u.5   103636755   E3 ubiquitin-protein ligase WAV3 

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Top 50 coexpressed genes to AT1G08050 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G08050 (ath-u.5 coexpression data)

CoexMap"837321"


athAT1G08050 | Entrez gene ID : 837321      
Species ath gma vvi ppo mtr sly zma bdi hvu bra cit bna sbi ghi osa sot nta cre tae
Paralog 12 3 3 3 3 3 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005576 [list] [network] extracellular region  (3158 genes)  ISM  
GO MF
Protein NP_172283.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 2,  E.R. 2,  nucl 1,  E.R._plas 1,  plas 1,  chlo_mito 1,  cysk_nucl 1,  E.R._vacu 1  (predict for NP_172283.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_172283.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT1G08050
ath-r.7
for
AT1G08050
ath-m.9
for
AT1G08050
ath-e.2
for
AT1G08050
ath-m.4.bio
for
AT1G08050
ath-m.4.hor
for
AT1G08050
ath-m.4.lig
for
AT1G08050
ath-m.4.str
for
AT1G08050
ath-m.4.tis
for
AT1G08050
ath-u.5
for
AT2G38970
ath-u.5
for
AT3G54780
ath-u.5
for
AT5G60710
gma-u.5
for
100818239
gma-u.5
for
100818406
gma-u.5
for
100813784
vvi-u.5
for
100233041
vvi-u.5
for
100253096
vvi-u.5
for
100266793
ppo-u.5
for
112326296
ppo-u.5
for
112328650
ppo-u.5
for
112328368
mtr-u.5
for
11410528
mtr-u.5
for
11405602
mtr-u.5
for
25487823
sly-u.5
for
101244547
sly-u.5
for
101250694
sly-u.5
for
101263576
zma-u.5
for
100382510
zma-u.5
for
103636755


Ortholog ID: 376
Species ath ath bra bra bna bna ghi ghi cit cit gma gma vvi vvi ppo ppo mtr mtr sly sly sot sot nta nta osa zma tae hvu hvu sbi cre cre
Symbol AT2G38970 AT3G54780 LOC103871549 LOC103845486 LOC106371621 LOC106450983 LOC121212161 LOC107958568 LOC102608444 LOC102614885 LOC100813569 LOC100781344 LOC100266793 LOC100233041 LOC7465346 LOC112326296 LOC11405602 LOC11410528 LOC101244547 LOC101250694 LOC102582573 LOC102583607 LOC107765022 LOC142166303 LOC4330003 LOC103636755 LOC123053827 LOC123402752 LOC123449860 LOC8085504 CHLRE_09g395843v5 CHLRE_12g500550v5
Function* Zinc finger (C3HC4-type RING finger) family protein Zinc finger (C3HC4-type RING finger) family protein E3 ubiquitin-protein ligase WAV3 E3 ubiquitin-protein ligase WAV3 E3 ubiquitin-protein ligase WAV3 E3 ubiquitin-protein ligase WAV3 E3 ubiquitin-protein ligase WAV3 E3 ubiquitin-protein ligase WAV3 E3 ubiquitin-protein ligase WAV3 E3 ubiquitin-protein ligase WAV3-like E3 ubiquitin-protein ligase WAV3 E3 ubiquitin-protein ligase WAV3 E3 ubiquitin-protein ligase WAV3 E3 ubiquitin-protein ligase WAV3 E3 ubiquitin-protein ligase WAV3 E3 ubiquitin-protein ligase WAV3-like E3 ubiquitin-protein ligase WAV3 E3 ubiquitin-protein ligase WAV3 E3 ubiquitin-protein ligase WAV3-like E3 ubiquitin-protein ligase WAV3-like uncharacterized LOC102582573 uncharacterized LOC102583607 E3 ubiquitin-protein ligase WAV3-like E3 ubiquitin-protein ligase WAV3-like E3 ubiquitin-protein ligase WAV3 E3 ubiquitin-protein ligase WAV3 E3 ubiquitin-protein ligase WAV3 E3 ubiquitin-protein ligase WAV3-like E3 ubiquitin-protein ligase WAV3-like uncharacterized LOC8085504 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00071 Fatty acid degradation 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 2
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03250 Viral life cycle - HIV-1 2
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01230 Biosynthesis of amino acids 4
sot00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 4
nta04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 2
hvu01230 Biosynthesis of amino acids 2
hvu00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi02010 ABC transporters 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818482 824643 103871549 103845486 106371621 106450983 121212161 107958568 102608444 102614885 100813569 100781344 100266793 100233041 7465346 112326296 11405602 11410528 101244547 101250694 102582573 102583607 107765022 142166303 4330003 103636755 123053827 123402752 123449860 8085504 66054686 5716380
The preparation time of this page was 1.6 [sec].