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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT1G01880   5'-3' exonuclease family protein 
 ath-r.7   AT1G01880   5'-3' exonuclease family protein 
 ath-e.2   AT1G01880   5'-3' exonuclease family protein 
 bra-r.6   103843814   flap endonuclease GEN-like 1 
 bna-r.1   106434141   flap endonuclease GEN-like 1 
 bna-r.1   106425991   flap endonuclease GEN-like 1 
 ghi-r.1   107900908   flap endonuclease GEN-like 1 
 ghi-r.1   107887221   flap endonuclease GEN-like 1 
 cit-r.1   102621447   flap endonuclease GEN-like 1 
 cit-r.1   127898610   flap endonuclease GEN-like 1 
 gma-u.5   100791251   flap endonuclease GEN-like 1 
 gma-u.5   100779848   flap endonuclease GEN-like 1 
 vvi-u.5   100259113   flap endonuclease GEN-like 1 
 ppo-u.5   7464906   flap endonuclease GEN-like 1 
 mtr-u.5   11428730   flap endonuclease GEN-like 1 
 sly-u.5   101264254   flap endonuclease GEN-like 1 
 sot-r.1   102595702   flap endonuclease GEN-like 1 
 nta-r.1   107801586   flap endonuclease GEN-like 1 
 nta-r.1   107801655   flap endonuclease GEN-like 1 
 osa-u.5   4347617   flap endonuclease GEN-like 1 
 zma-u.5   103647601   flap endonuclease GEN-like 1 
 zma-u.5   100383402   Flap endonuclease GEN-like 1 
 tae-r.2   123104462   flap endonuclease GEN-like 1 
 tae-r.2   123112761   flap endonuclease GEN-like 1 
 tae-r.2   123122237   flap endonuclease GEN-like 1 
 hvu-r.1   123399992   flap endonuclease GEN-like 1 
 sbi-r.1   8054867   flap endonuclease GEN-like 1 
 bdi-r.1   100839455   flap endonuclease GEN-like 1 

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Top 50 coexpressed genes to AT1G01880 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G01880 (ath-u.5 coexpression data)

CoexMap"837373"


athAT1G01880 | Entrez gene ID : 837373      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 2 2 2 2 1 1 1 1 1 2 1 2 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009650 [list] [network] UV protection  (13 genes)  IGI  
GO:0006259 [list] [network] DNA metabolic process  (329 genes)  IDA  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0017108 [list] [network] 5'-flap endonuclease activity  (5 genes)  IDA  
GO:0008821 [list] [network] crossover junction DNA endonuclease activity  (6 genes)  IDA  
Protein NP_001184887.1 [sequence] [blastp]
NP_001320986.1 [sequence] [blastp]
NP_001320987.1 [sequence] [blastp]
NP_171691.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for NP_001184887.1)
chlo 4,  nucl 4,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_001320986.1)
nucl 9  (predict for NP_001320987.1)
nucl 9  (predict for NP_171691.2)
Subcellular
localization
TargetP
mito 7,  other 5  (predict for NP_001184887.1)
mito 6  (predict for NP_001320986.1)
mito 8,  other 5  (predict for NP_001320987.1)
mito 8,  other 5  (predict for NP_171691.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT1G01880
ath-r.7
for
AT1G01880
ath-e.2
for
AT1G01880
bra-r.6
for
103843814
bna-r.1
for
106434141
bna-r.1
for
106425991
ghi-r.1
for
107900908
ghi-r.1
for
107887221
cit-r.1
for
102621447
cit-r.1
for
127898610
gma-u.5
for
100791251
gma-u.5
for
100779848
vvi-u.5
for
100259113
ppo-u.5
for
7464906
mtr-u.5
for
11428730
sly-u.5
for
101264254
sot-r.1
for
102595702
nta-r.1
for
107801586
nta-r.1
for
107801655
osa-u.5
for
4347617
zma-u.5
for
103647601
zma-u.5
for
100383402
tae-r.2
for
123104462
tae-r.2
for
123112761
tae-r.2
for
123122237
hvu-r.1
for
123399992
sbi-r.1
for
8054867
bdi-r.1
for
100839455


Ortholog ID: 9764
Species ath bra bna bna ghi ghi cit cit gma gma vvi ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol AT1G01880 LOC103843814 LOC106434141 LOC106425991 LOC107900908 LOC107887221 LOC102621447 LOC127898610 LOC100791251 LOC100779848 LOC100259113 LOC7464906 LOC11428730 LOC101264254 LOC102595702 LOC107801586 LOC107801655 LOC4347617 LOC103647601 LOC100383402 LOC123104462 LOC123112761 LOC123122237 LOC123399992 LOC8054867 LOC100839455
Function* 5'-3' exonuclease family protein flap endonuclease GEN-like 1 flap endonuclease GEN-like 1 flap endonuclease GEN-like 1 flap endonuclease GEN-like 1 flap endonuclease GEN-like 1 flap endonuclease GEN-like 1 flap endonuclease GEN-like 1 flap endonuclease GEN-like 1 flap endonuclease GEN-like 1 flap endonuclease GEN-like 1 flap endonuclease GEN-like 1 flap endonuclease GEN-like 1 flap endonuclease GEN-like 1 flap endonuclease GEN-like 1 flap endonuclease GEN-like 1 flap endonuclease GEN-like 1 flap endonuclease GEN-like 1 flap endonuclease GEN-like 1 Flap endonuclease GEN-like 1 flap endonuclease GEN-like 1 flap endonuclease GEN-like 1 flap endonuclease GEN-like 1 flap endonuclease GEN-like 1 flap endonuclease GEN-like 1 flap endonuclease GEN-like 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 10
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 9
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
cit03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04814 Motor proteins 4
mtr04120 Ubiquitin mediated proteolysis 2
mtr04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 2
nta00330 Arginine and proline metabolism 2
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 3
zma03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03010 Ribosome 3
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 2
bdi03420 Nucleotide excision repair 2
bdi03430 Mismatch repair 2
bdi03440 Homologous recombination 2
bdi03460 Fanconi anemia pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837373 103843814 106434141 106425991 107900908 107887221 102621447 127898610 100791251 100779848 100259113 7464906 11428730 101264254 102595702 107801586 107801655 4347617 103647601 100383402 123104462 123112761 123122237 123399992 8054867 100839455
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