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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT1G12790   DNA ligase-like protein 
 ath-r.7   AT1G12790   DNA ligase-like protein 
 ath-m.9   AT1G12790   DNA ligase-like protein 
 ath-e.2   AT1G12790   DNA ligase-like protein 
 ath-m.4.bio   AT1G12790   DNA ligase-like protein 
 ath-m.4.hor   AT1G12790   DNA ligase-like protein 
 ath-m.4.lig   AT1G12790   DNA ligase-like protein 
 ath-m.4.str   AT1G12790   DNA ligase-like protein 
 ath-m.4.tis   AT1G12790   DNA ligase-like protein 
 bra-r.6   103871981   protein PARTING DANCERS 
 sot-r.1   102592371   uncharacterized LOC102592371 
 nta-r.1   107785575   protein PARTING DANCERS-like 
 nta-r.1   107792491   protein PARTING DANCERS homolog 
 osa-u.5   4339770   protein PARTING DANCERS homolog 
 hvu-r.1   123424586   protein PARTING DANCERS homolog 
 sbi-r.1   8065305   protein PARTING DANCERS 
 sbi-r.1   8070742   protein PARTING DANCERS 
 bdi-r.1   100841911   protein PARTING DANCERS 

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Top 50 coexpressed genes to AT1G12790 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G12790 (ath-u.5 coexpression data)

CoexMap"837835"


athAT1G12790 | Entrez gene ID : 837835      
Species ath bra sot nta osa hvu sbi bdi ghi cre ppo mtr sly tae zma cit gma vvi bna
Paralog 9 1 1 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010845 [list] [network] positive regulation of reciprocal meiotic recombination  (1 genes)  IMP  
GO:0000712 [list] [network] resolution of meiotic recombination intermediates  (6 genes)  IMP  
GO:0007140 [list] [network] male meiotic nuclear division  (27 genes)  IMP  
GO:0048236 [list] [network] plant-type sporogenesis  (40 genes)  IMP  
GO:0007131 [list] [network] reciprocal meiotic recombination  (44 genes)  IMP  
GO:0007059 [list] [network] chromosome segregation  (67 genes)  IMP  
GO:0009555 [list] [network] pollen development  (385 genes)  IMP  
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_563913.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 3,  extr 1,  cysk_nucl 1  (predict for NP_563913.1)
Subcellular
localization
TargetP
other 6,  chlo 4  (predict for NP_563913.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT1G12790
ath-r.7
for
AT1G12790
ath-m.9
for
AT1G12790
ath-e.2
for
AT1G12790
ath-m.4.bio
for
AT1G12790
ath-m.4.hor
for
AT1G12790
ath-m.4.lig
for
AT1G12790
ath-m.4.str
for
AT1G12790
ath-m.4.tis
for
AT1G12790
bra-r.6
for
103871981
sot-r.1
for
102592371
nta-r.1
for
107785575
nta-r.1
for
107792491
osa-u.5
for
4339770
hvu-r.1
for
123424586
sbi-r.1
for
8065305
sbi-r.1
for
8070742
bdi-r.1
for
100841911


Ortholog ID: 10450
Species ath bra sot nta nta osa hvu sbi sbi bdi
Symbol AT1G12790 LOC103871981 LOC102592371 LOC107785575 LOC107792491 LOC4339770 LOC123424586 LOC8065305 LOC8070742 LOC100841911
Function* DNA ligase-like protein protein PARTING DANCERS uncharacterized LOC102592371 protein PARTING DANCERS-like protein PARTING DANCERS homolog protein PARTING DANCERS homolog protein PARTING DANCERS homolog protein PARTING DANCERS protein PARTING DANCERS protein PARTING DANCERS
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00280 Valine, leucine and isoleucine degradation 8
ath00640 Propanoate metabolism 6
ath00785 Lipoic acid metabolism 3
ath01210 2-Oxocarboxylic acid metabolism 3
ath00410 beta-Alanine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00670 One carbon pool by folate 2
nta04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837835 103871981 102592371 107785575 107792491 4339770 123424586 8065305 8070742 100841911
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