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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   FDM4   XH/XS domain-containing protein 
 ath-r.7   FDM4   XH/XS domain-containing protein 
 ath-m.9   FDM4   XH/XS domain-containing protein 
 ath-e.2   FDM4   XH/XS domain-containing protein 
 ath-m.4.bio   FDM4   XH/XS domain-containing protein 
 ath-m.4.hor   FDM4   XH/XS domain-containing protein 
 ath-m.4.lig   FDM4   XH/XS domain-containing protein 
 ath-m.4.str   FDM4   XH/XS domain-containing protein 
 ath-m.4.tis   FDM4   XH/XS domain-containing protein 
 bra-r.6   103843080   factor of DNA methylation 4 
 bna-r.1   106369110   factor of DNA methylation 4 
 bna-r.1   106397360   factor of DNA methylation 4-like 
 bna-r.1   106411940   factor of DNA methylation 4-like 

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Top 50 coexpressed genes to FDM4 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to FDM4 (ath-u.5 coexpression data)

CoexMap"837939"


athFDM4 | Entrez gene ID : 837939      
Species ath bra bna sbi ghi cre mtr tae cit sot bdi vvi ppo sly zma osa gma nta hvu
Paralog 9 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0080188 [list] [network] gene silencing by siRNA-directed DNA methylation  (44 genes)  IGI  
GO CC
GO MF
Protein NP_001318996.1 [sequence] [blastp]
NP_172834.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 4  (predict for NP_001318996.1)
cyto 5,  nucl 4  (predict for NP_172834.1)
Subcellular
localization
TargetP
other 9,  mito 3  (predict for NP_001318996.1)
other 9,  mito 3  (predict for NP_172834.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
FDM4
ath-r.7
for
FDM4
ath-m.9
for
FDM4
ath-e.2
for
FDM4
ath-m.4.bio
for
FDM4
ath-m.4.hor
for
FDM4
ath-m.4.lig
for
FDM4
ath-m.4.str
for
FDM4
ath-m.4.tis
for
FDM4
bra-r.6
for
103843080
bna-r.1
for
106369110
bna-r.1
for
106397360
bna-r.1
for
106411940


Ortholog ID: 18215
Species ath bra bna bna bna
Symbol FDM4 LOC103843080 LOC106369110 LOC106397360 LOC106411940
Function* XH/XS domain-containing protein factor of DNA methylation 4 factor of DNA methylation 4 factor of DNA methylation 4-like factor of DNA methylation 4-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 3
bra03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837939 103843080 106369110 106397360 106411940
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