ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.9	AT1G17545	Protein phosphatase 2C family protein
ath-m.4.bio	AT1G17545	Protein phosphatase 2C family protein
ath-m.4.hor	AT1G17545	Protein phosphatase 2C family protein
ath-m.4.lig	AT1G17545	Protein phosphatase 2C family protein
ath-m.4.str	AT1G17545	Protein phosphatase 2C family protein
ath-m.4.tis	AT1G17545	Protein phosphatase 2C family protein
ath-u.5	ABI1	Protein phosphatase 2C family protein
ath-u.5	ABI2	Protein phosphatase 2C family protein
ath-u.5	HAB2	homology to ABI2
gma-u.5	102662702	protein phosphatase 2C 77
gma-u.5	100812974	protein phosphatase 2C 50
gma-u.5	100805281	protein phosphatase 2C 77
vvi-u.5	100241147	protein phosphatase 2C 16
vvi-u.5	100267957	protein phosphatase 2C 77
vvi-u.5	100242262	protein phosphatase 2C 53
ppo-u.5	7470679	protein phosphatase 2C 53
ppo-u.5	7478176	protein phosphatase 2C 16
ppo-u.5	7463721	protein phosphatase 2C 50
mtr-u.5	11425747	protein phosphatase 2C 53
mtr-u.5	25486432	protein phosphatase 2C 56
mtr-u.5	11431922	protein phosphatase 2C 50
sly-u.5	101250718	probable protein phosphatase 2C 6
sly-u.5	PP2C-1	protein phosphatase 2C ABI2 homolog
sly-u.5	ABI2	protein phosphatase 2C ABI2
osa-u.5	4324201	probable protein phosphatase 2C 6
osa-u.5	4339454	protein phosphatase 2C 50
osa-u.5	PP2C53	protein phosphatase 2C 53-like
zma-u.5	109941434	probable protein phosphatase 2C 6
zma-u.5	100283932	protein phosphatase 2C ABI2
zma-u.5	103635987	protein phosphatase 2C 50

Top 50 coexpressed genes to AT1G17545 (ath-m.9 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to AT1G17545 (ath-m.9 coexpression data)

CoexMap"838329"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006470 [list] [network] protein dephosphorylation

(41 genes)

IEA

GO CC

GO:0005634 [list] [network] nucleus

(10367 genes)

ISM

GO MF

GO:0004722 [list] [network] protein serine/threonine phosphatase activity

(46 genes)

IEA

Protein

NP_173198.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, mito 1, E.R. 1

(predict for NP_173198.1)

Subcellular
localization
TargetP

mito 4, other 3

(predict for NP_173198.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.9 for AT1G17545	ath-m.4.bio for AT1G17545	ath-m.4.hor for AT1G17545	ath-m.4.lig for AT1G17545	ath-m.4.str for AT1G17545	ath-m.4.tis for AT1G17545	ath-u.5 for ABI1	ath-u.5 for ABI2	ath-u.5 for HAB2	gma-u.5 for 102662702	gma-u.5 for 100812974	gma-u.5 for 100805281	vvi-u.5 for 100241147	vvi-u.5 for 100267957	vvi-u.5 for 100242262	ppo-u.5 for 7470679	ppo-u.5 for 7478176	ppo-u.5 for 7463721	mtr-u.5 for 11425747	mtr-u.5 for 25486432	mtr-u.5 for 11431922	sly-u.5 for 101250718	sly-u.5 for PP2C-1	sly-u.5 for ABI2	osa-u.5 for 4324201	osa-u.5 for 4339454	osa-u.5 for PP2C53	zma-u.5 for 109941434	zma-u.5 for 100283932	zma-u.5 for 103635987

Ortholog

Ortholog ID: 834

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

ABI1

HAB1

ABI2

PP2C53

Function^*

Protein phosphatase 2C family protein

HYPERSENSITIVE TO ABA1

protein phosphatase 2C 77

protein phosphatase 2C 7

protein phosphatase 2C 16-like

protein phosphatase 2C 16

protein phosphatase 2C 53

protein phosphatase 2C 16

protein phosphatase 2C 77

protein phosphatase 2C 56

protein phosphatase 2C 53

protein phosphatase 2C 77

protein phosphatase 2C 50

protein phosphatase 2C 53

protein phosphatase 2C 56

protein phosphatase 2C 77

protein phosphatase 2C ABI2

protein phosphatase 2C 53

probable protein phosphatase 2C 53

probable protein phosphatase 2C 6

protein phosphatase 2C 16-like

protein phosphatase 2C 53

protein phosphatase 2C 53-like

probable protein phosphatase 2C 6

protein phosphatase 2C 50

protein phosphatase 2C ABI2

probable protein phosphatase 2C 6

protein phosphatase 2C 53-like

protein phosphatase 2C 50-like

probable protein phosphatase 2C 53

probable protein phosphatase 2C 6

probable protein phosphatase 2C 53

probable protein phosphatase 2C 50

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04016	MAPK signaling pathway - plant	7
ath04075	Plant hormone signal transduction	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	9
ath04016	MAPK signaling pathway - plant	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	9
bra04016	MAPK signaling pathway - plant	8
bra00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04016	MAPK signaling pathway - plant	4
bra04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	4
bna04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04016	MAPK signaling pathway - plant	2
bna04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04016	MAPK signaling pathway - plant	2
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04016	MAPK signaling pathway - plant	2
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03015	mRNA surveillance pathway	2
cit03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04016	MAPK signaling pathway - plant	2
cit04075	Plant hormone signal transduction	2
cit00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	2
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	7
gma04016	MAPK signaling pathway - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04016	MAPK signaling pathway - plant	2
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04016	MAPK signaling pathway - plant	2
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	7
sly04016	MAPK signaling pathway - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	2
sly04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03015	mRNA surveillance pathway	6
nta04016	MAPK signaling pathway - plant	4
nta04075	Plant hormone signal transduction	4
nta04136	Autophagy - other	2
nta04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03015	mRNA surveillance pathway	6
nta04016	MAPK signaling pathway - plant	4
nta04075	Plant hormone signal transduction	4
nta04136	Autophagy - other	2
nta04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	7
osa04016	MAPK signaling pathway - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	10
osa04016	MAPK signaling pathway - plant	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	8
zma04016	MAPK signaling pathway - plant	6
zma00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	2
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	12
tae04016	MAPK signaling pathway - plant	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	2
hvu04712	Circadian rhythm - plant	2
hvu04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	3
hvu00564	Glycerophospholipid metabolism	2
hvu04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	4
sbi04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	8
bdi04016	MAPK signaling pathway - plant	5

Expression

Expression pattern

Entrez Gene ID^*

828714

843609

103845142

103872541

106358579

106354239

107906080

107958856

102616426

102624980

102662702

100802159

100242262

100267957

7463721

7470679

25486432

25494205

101261835

101265524

102593313

102582883

107782695

107782223

4339797

4324201

103635987

100283932

100125713

123452695

123448346

8065319

8078643

100846802

100830931

5720429

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Species	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	9	3	3	3	3	3	3	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT1G17545 (ath-m.9 coexpression data)

Top 50 enrichment test to AT1G17545 (ath-m.9 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**