ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-u.5	FMO1	flavin-dependent monooxygenase 1
ath-r.7	FMO1	flavin-dependent monooxygenase 1
ath-m.9	FMO1	flavin-dependent monooxygenase 1
ath-e.2	FMO1	flavin-dependent monooxygenase 1
ath-m.4.bio	FMO1	flavin-dependent monooxygenase 1
ath-m.4.hor	FMO1	flavin-dependent monooxygenase 1
ath-m.4.lig	FMO1	flavin-dependent monooxygenase 1
ath-m.4.str	FMO1	flavin-dependent monooxygenase 1
ath-m.4.tis	FMO1	flavin-dependent monooxygenase 1
gma-u.5	100799486	probable flavin-containing monooxygenase 1
gma-u.5	100812619	probable flavin-containing monooxygenase 1
gma-u.5	100811537	probable flavin-containing monooxygenase 1
vvi-u.5	100265831	probable flavin-containing monooxygenase 1
vvi-u.5	100243508	probable flavin-containing monooxygenase 1
mtr-u.5	25488323	probable flavin-containing monooxygenase 1
mtr-u.5	25481672	probable flavin-containing monooxygenase 1
sly-u.5	101258974	probable flavin-containing monooxygenase 1
sly-u.5	101254646	probable flavin-containing monooxygenase 1
osa-u.5	9267722	probable flavin-containing monooxygenase 1
osa-u.5	4347776	probable flavin-containing monooxygenase 1
osa-u.5	4347777	probable flavin-containing monooxygenase 1
zma-u.5	100193552	uncharacterized LOC100193552

Annotation

functional annotation

KEGG

ath00430 [list] [network] Taurine and hypotaurine metabolism (11 genes)

GO BP

GO:0062034 [list] [network] L-pipecolic acid biosynthetic process	(4 genes)	IMP
GO:0009626 [list] [network] plant-type hypersensitive response	(54 genes)	IMP
GO:0009627 [list] [network] systemic acquired resistance	(68 genes)	IDA IEP
GO:0071456 [list] [network] cellular response to hypoxia	(241 genes)	IEP
GO:0050832 [list] [network] defense response to fungus	(282 genes)	IMP
GO:0042742 [list] [network] defense response to bacterium	(363 genes)	IMP
GO:0051707 [list] [network] response to other organism	(1189 genes)	IEP

GO CC

GO:0009507 [list] [network] chloroplast

(5014 genes)

ISM

GO MF

GO:0062047 [list] [network] pipecolic acid N-hydroxylase	(1 genes)	IMP
GO:0031543 [list] [network] peptidyl-proline dioxygenase activity	(4 genes)	IMP

Protein

NP_173359.3 [sequence] [blastp]

Subcellular
localization
wolf

chlo 5, mito 2, nucl 1, cyto 1, extr 1, E.R. 1, cyto_nucl 1, cyto_E.R. 1

(predict for NP_173359.3)

Subcellular
localization
TargetP

scret 4, other 3

(predict for NP_173359.3)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for FMO1	ath-r.7 for FMO1	ath-m.9 for FMO1	ath-e.2 for FMO1	ath-m.4.bio for FMO1	ath-m.4.hor for FMO1	ath-m.4.lig for FMO1	ath-m.4.str for FMO1	ath-m.4.tis for FMO1	gma-u.5 for 100799486	gma-u.5 for 100812619	gma-u.5 for 100811537	vvi-u.5 for 100265831	vvi-u.5 for 100243508	mtr-u.5 for 25488323	mtr-u.5 for 25481672	sly-u.5 for 101258974	sly-u.5 for 101254646	osa-u.5 for 9267722	osa-u.5 for 4347776	osa-u.5 for 4347777	zma-u.5 for 100193552

Ortholog

Ortholog ID: 235

Species

ath

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

FMO1

Function^*

flavin-dependent monooxygenase 1

probable flavin-containing monooxygenase 1

putative flavin-containing monooxygenase 1

probable flavin-containing monooxygenase 1

uncharacterized LOC100193552

probable flavin-containing monooxygenase 1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00430	Taurine and hypotaurine metabolism	6
bna00300	Lysine biosynthesis	2
bna01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00430	Taurine and hypotaurine metabolism	6
bna00300	Lysine biosynthesis	2
bna01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00910	Nitrogen metabolism	3
ghi00430	Taurine and hypotaurine metabolism	2
ghi00999	Biosynthesis of various plant secondary metabolites	2
ghi00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00100	Steroid biosynthesis	2
gma00909	Sesquiterpenoid and triterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00430	Taurine and hypotaurine metabolism	5
vvi00943	Isoflavonoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00430	Taurine and hypotaurine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00430	Taurine and hypotaurine metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00430	Taurine and hypotaurine metabolism	2
sly00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00430	Taurine and hypotaurine metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00430	Taurine and hypotaurine metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00430	Taurine and hypotaurine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00430	Taurine and hypotaurine metabolism	6
nta01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00430	Taurine and hypotaurine metabolism	2
osa04712	Circadian rhythm - plant	2
osa00730	Thiamine metabolism	2
osa01240	Biosynthesis of cofactors	2
osa04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04712	Circadian rhythm - plant	4
osa00430	Taurine and hypotaurine metabolism	2
osa00730	Thiamine metabolism	2
osa01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04712	Circadian rhythm - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00430	Taurine and hypotaurine metabolism	6
tae02010	ABC transporters	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00430	Taurine and hypotaurine metabolism	6
tae02010	ABC transporters	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00350	Tyrosine metabolism	6
hvu00360	Phenylalanine metabolism	6
hvu00380	Tryptophan metabolism	6
hvu00901	Indole alkaloid biosynthesis	6
hvu00950	Isoquinoline alkaloid biosynthesis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00430	Taurine and hypotaurine metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

838508

106397714

106361959

107907082

102626590

100811537

100260613

100248597

7485465

120578057

101254042

102605841

102581286

107828999

107809551

9267722

4335203

100193552

123162631

123167772

123410736

8081189

100824340

5717012

5717049

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to FMO1 (ath-u.5 coexpression data)

Top 50 enrichment test to FMO1 (ath-u.5 coexpression data)


Species	ath	gma	vvi	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	ppo	sbi	ghi	sot	nta	cre	tae
Paralog	9	3	2	2	2	3	1	0	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to FMO1 (ath-u.5 coexpression data)

Top 50 enrichment test to FMO1 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**