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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AUF2   F-box family protein 
 ath-r.7   AUF2   F-box family protein 
 ath-e.2   AUF2   F-box family protein 
 ath-u.5   AUF1   F-box family protein 
 bra-r.6   103853110   F-box protein At1g78100 
 bra-r.6   103836260   F-box protein At1g22220 
 bna-r.1   125603022   F-box protein AUF1-like 
 bna-r.1   106454784   F-box protein AUF2-like 
 ghi-r.1   107962444   F-box protein At1g78100 
 ghi-r.1   107901447   F-box protein At1g22220 
 cit-r.1   107176294   F-box protein AUF1 
 vvi-u.5   100254118   F-box protein AUF2 
 ppo-u.5   18096229   F-box protein AUF2 
 ppo-u.5   7486606   F-box protein AUF2 
 sly-u.5   101249912   F-box protein AUF1 
 sot-r.1   102601177   F-box protein At1g78100 
 nta-r.1   107762045   F-box protein AUF1 
 nta-r.1   107805569   F-box protein AUF2-like 

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Top 50 coexpressed genes to AUF2 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AUF2 (ath-u.5 coexpression data)

CoexMap"838827"


athAUF2 | Entrez gene ID : 838827      
Species ath bra bna ghi cit vvi ppo sly sot nta bdi osa tae zma cre mtr sbi gma hvu
Paralog 4 2 2 2 1 1 2 1 1 2 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0071456 [list] [network] cellular response to hypoxia  (241 genes)  HEP  
GO CC
GO:0009506 [list] [network] plasmodesma  (874 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_173641.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  chlo 1,  nucl 1,  golg 1,  chlo_mito 1  (predict for NP_173641.1)
Subcellular
localization
TargetP
other 7  (predict for NP_173641.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AUF2
ath-r.7
for
AUF2
ath-e.2
for
AUF2
ath-u.5
for
AUF1
bra-r.6
for
103853110
bra-r.6
for
103836260
bna-r.1
for
125603022
bna-r.1
for
106454784
ghi-r.1
for
107962444
ghi-r.1
for
107901447
cit-r.1
for
107176294
vvi-u.5
for
100254118
ppo-u.5
for
18096229
ppo-u.5
for
7486606
sly-u.5
for
101249912
sot-r.1
for
102601177
nta-r.1
for
107762045
nta-r.1
for
107805569


Ortholog ID: 8705
Species ath ath bra bra bra bna bna bna ghi ghi cit vvi ppo ppo sly sot nta nta
Symbol AUF2 AUF1 LOC103853110 LOC103836260 LOC103829343 LOC106454784 LOC125603872 LOC106399516 LOC107962444 LOC107901447 LOC107176294 LOC100254118 LOC18096229 LOC7486606 LOC101249912 LOC102601177 LOC107762045 LOC107805569
Function* F-box family protein F-box family protein F-box protein At1g78100 F-box protein At1g22220 F-box protein At1g22220-like F-box protein AUF2-like F-box protein AUF1-like F-box protein AUF2-like F-box protein At1g78100 F-box protein At1g22220 F-box protein AUF1 F-box protein AUF2 F-box protein AUF2 F-box protein AUF2 F-box protein AUF1 F-box protein At1g78100 F-box protein AUF1 F-box protein AUF2-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 2
bra04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01250 Biosynthesis of nucleotide sugars 3
cit00520 Amino sugar and nucleotide sugar metabolism 2
cit04144 Endocytosis 2
cit00541 Biosynthesis of various nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04016 MAPK signaling pathway - plant 2
ppo04075 Plant hormone signal transduction 2
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
sly03015 mRNA surveillance pathway 4
sly03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00051 Fructose and mannose metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01240 Biosynthesis of cofactors 2
nta01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00051 Fructose and mannose metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01240 Biosynthesis of cofactors 2
nta01250 Biosynthesis of nucleotide sugars 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838827 844146 103853110 103836260 103829343 106454784 125603872 106399516 107962444 107901447 107176294 100254118 18096229 7486606 101249912 102601177 107762045 107805569
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