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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT1G31840   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.bio   AT1G31840   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.hor   AT1G31840   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.lig   AT1G31840   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.str   AT1G31840   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.tis   AT1G31840   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ghi-r.1   107916769   putative pentatricopeptide repeat-containing protein At1g31840 
 ghi-r.1   107916883   putative pentatricopeptide repeat-containing protein At1g31840 
 cit-r.1   102610143   putative pentatricopeptide repeat-containing protein At1g31840 
 cit-r.1   112495893   putative pentatricopeptide repeat-containing protein At1g31840 
 vvi-u.5   104882747   putative pentatricopeptide repeat-containing protein At1g31840 
 ppo-u.5   7474831   putative pentatricopeptide repeat-containing protein At1g31840 
 nta-r.1   107785709   uncharacterized LOC107785709 

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Top 50 coexpressed genes to AT1G31840 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G31840 (ath-m.9 coexpression data)

CoexMap"840074"


athAT1G31840 | Entrez gene ID : 840074      
Species ath ghi cit vvi ppo nta zma cre bdi sly osa sbi mtr bra gma tae hvu bna sot
Paralog 6 2 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
Protein NP_001185123.1 [sequence] [blastp]
NP_174467.4 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 4,  vacu 1,  plas 1,  extr 1,  E.R._vacu 1  (predict for NP_001185123.1)
chlo 6,  chlo_mito 4,  vacu 1,  cyto 1,  plas 1,  extr 1,  E.R._vacu 1,  cyto_plas 1  (predict for NP_174467.4)
Subcellular
localization
TargetP
scret 5  (predict for NP_001185123.1)
scret 5  (predict for NP_174467.4)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT1G31840
ath-m.4.bio
for
AT1G31840
ath-m.4.hor
for
AT1G31840
ath-m.4.lig
for
AT1G31840
ath-m.4.str
for
AT1G31840
ath-m.4.tis
for
AT1G31840
ghi-r.1
for
107916769
ghi-r.1
for
107916883
cit-r.1
for
102610143
cit-r.1
for
112495893
vvi-u.5
for
104882747
ppo-u.5
for
7474831
nta-r.1
for
107785709


Ortholog ID: 16851
Species ghi ghi cit cit vvi ppo nta
Symbol LOC107916769 LOC107916883 LOC102610143 LOC112495893 LOC104882747 LOC7474831 LOC107785709
Function* putative pentatricopeptide repeat-containing protein At1g31840 putative pentatricopeptide repeat-containing protein At1g31840 putative pentatricopeptide repeat-containing protein At1g31840 putative pentatricopeptide repeat-containing protein At1g31840 putative pentatricopeptide repeat-containing protein At1g31840 putative pentatricopeptide repeat-containing protein At1g31840 uncharacterized LOC107785709
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107916769 107916883 102610143 112495893 104882747 7474831 107785709
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