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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   GRF11   general regulatory factor 11 
 ath-r.7   GRF11   general regulatory factor 11 
 ath-m.9   GRF11   general regulatory factor 11 
 ath-e.2   GRF11   general regulatory factor 11 
 ath-m.4.bio   GRF11   general regulatory factor 11 
 ath-m.4.hor   GRF11   general regulatory factor 11 
 ath-m.4.lig   GRF11   general regulatory factor 11 
 ath-m.4.str   GRF11   general regulatory factor 11 
 ath-m.4.tis   GRF11   general regulatory factor 11 
 ath-u.5   GRF10   general regulatory factor 10 
 bra-r.6   103858023   14-3-3-like protein GF14 mu 
 bra-r.6   103869057   14-3-3-like protein GF14 epsilon 
 bra-r.6   103829338   14-3-3-like protein GF14 epsilon 
 bna-r.1   106451240   14-3-3-like protein GF14 epsilon 
 bna-r.1   106428158   14-3-3-like protein GF14 mu 
 ghi-r.1   107905110   14-3-3 protein 7 
 ghi-r.1   107901460   14-3-3 protein 7-like 
 cit-r.1   102608475   14-3-3-like protein D 
 cit-r.1   102613414   14-3-3-like protein D 
 cit-r.1   102628987   14-3-3 protein 7 
 gma-u.5   SGF14R   putative 14-3-3 protein SGF14r 
 gma-u.5   SGF14L   14-3-3 protein SGF14l 
 gma-u.5   SGF14P   14-3-3 protein SGF14p 
 vvi-u.5   100254211   14-3-3-like protein GF14 iota 
 vvi-u.5   100250345   14-3-3-like protein D 
 vvi-u.5   100247183   14-3-3 protein 7 
 ppo-u.5   7455951   14-3-3-like protein D 
 ppo-u.5   7471053   14-3-3-like protein GF14 iota 
 ppo-u.5   7486596   14-3-3 protein 7 
 mtr-u.5   11406150   14-3-3-like protein C 
 mtr-u.5   25487782   14-3-3-like protein B 
 mtr-u.5   25485955   14-3-3-like protein C 
 sly-u.5   tft8   14-3-3 protein 8 
 sly-u.5   tft9   14-3-3 protein 9 
 sly-u.5   TFT7   14-3-3 protein 7 
 sot-r.1   102600258   14-3-3 protein 8 
 sot-r.1   102596432   14-3-3 protein 9 
 nta-r.1   107820598   14-3-3 protein 9 
 nta-r.1   107759102   14-3-3 protein 9 
 nta-r.1   107768890   14-3-3-like protein GF14 iota 
 osa-u.5   4325534   14-3-3-like protein GF14-G 

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Top 50 coexpressed genes to GRF11 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to GRF11 (ath-u.5 coexpression data)

CoexMap"840380"


athGRF11 | Entrez gene ID : 840380      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa cre hvu tae bdi zma sbi
Paralog 10 3 2 2 3 3 3 3 3 3 2 3 1 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0051117 [list] [network] ATPase binding  (5 genes)  IDA  
GO:0016597 [list] [network] amino acid binding  (14 genes)  TAS  
GO:0045309 [list] [network] protein phosphorylated amino acid binding  (14 genes)  TAS  
Protein NP_001077649.1 [sequence] [blastp]
NP_564451.2 [sequence] [blastp]
Subcellular
localization
wolf
mito_plas 4,  mito 4,  plas 4,  nucl_plas 4  (predict for NP_001077649.1)
plas 4,  nucl_plas 4,  nucl 2,  mito 2,  pero 1  (predict for NP_564451.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001077649.1)
other 8  (predict for NP_564451.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
GRF11
ath-r.7
for
GRF11
ath-m.9
for
GRF11
ath-e.2
for
GRF11
ath-m.4.bio
for
GRF11
ath-m.4.hor
for
GRF11
ath-m.4.lig
for
GRF11
ath-m.4.str
for
GRF11
ath-m.4.tis
for
GRF11
ath-u.5
for
GRF10
bra-r.6
for
103858023
bra-r.6
for
103869057
bra-r.6
for
103829338
bna-r.1
for
106451240
bna-r.1
for
106428158
ghi-r.1
for
107905110
ghi-r.1
for
107901460
cit-r.1
for
102608475
cit-r.1
for
102613414
cit-r.1
for
102628987
gma-u.5
for
SGF14R
gma-u.5
for
SGF14L
gma-u.5
for
SGF14P
vvi-u.5
for
100254211
vvi-u.5
for
100250345
vvi-u.5
for
100247183
ppo-u.5
for
7455951
ppo-u.5
for
7471053
ppo-u.5
for
7486596
mtr-u.5
for
11406150
mtr-u.5
for
25487782
mtr-u.5
for
25485955
sly-u.5
for
tft8
sly-u.5
for
tft9
sly-u.5
for
TFT7
sot-r.1
for
102600258
sot-r.1
for
102596432
nta-r.1
for
107820598
nta-r.1
for
107759102
nta-r.1
for
107768890
osa-u.5
for
4325534


Ortholog ID: 1417
Species ath bra bra bna bna bna ghi ghi cit cit gma gma gma vvi vvi vvi ppo ppo ppo mtr mtr mtr sly sly sot sot sot nta nta nta osa
Symbol GRF9 LOC103858023 LOC103829338 LOC106451240 LOC106401347 LOC106388283 LOC107901460 LOC107957763 LOC102608475 LOC102628987 SGF14L SGF14P GF14C LOC100254211 LOC100247183 LOC100244643 LOC7486596 LOC7492889 LOC18095500 LOC11406150 LOC25485955 LOC11410442 tft8 tft9 LOC102600258 LOC102596432 LOC102600581 LOC107820598 LOC107821878 LOC142172945 LOC4325534
Function* general regulatory factor 9 14-3-3-like protein GF14 mu 14-3-3-like protein GF14 epsilon 14-3-3-like protein GF14 epsilon 14-3-3-like protein GF14 iota 14-3-3-like protein GF14 mu 14-3-3 protein 7-like 14-3-3 protein 7-like 14-3-3-like protein D 14-3-3 protein 7 14-3-3 protein SGF14l 14-3-3 protein SGF14p 14-3-3 protein SGF14c 14-3-3-like protein GF14 iota 14-3-3 protein 7 14-3-3-like protein B 14-3-3 protein 7 14-3-3-like protein GF14 iota 14-3-3-like protein D 14-3-3-like protein C 14-3-3-like protein C 14-3-3 protein 9 14-3-3 protein 8 14-3-3 protein 9 14-3-3 protein 8 14-3-3 protein 9 14-3-3-like protein GF14 iota 14-3-3 protein 9 14-3-3 protein 9 14-3-3 protein 7-like 14-3-3-like protein GF14-G
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 3
ath00190 Oxidative phosphorylation 3
ath04145 Phagosome 3
ath00620 Pyruvate metabolism 2
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 3
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01230 Biosynthesis of amino acids 6
bna00030 Pentose phosphate pathway 4
bna00040 Pentose and glucuronate interconversions 4
bna00710 Carbon fixation by Calvin cycle 4
bna01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 11
cit00190 Oxidative phosphorylation 4
cit04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00220 Arginine biosynthesis 2
gma00250 Alanine, aspartate and glutamate metabolism 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma00910 Nitrogen metabolism 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 7
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 8
ppo00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00541 Biosynthesis of various nucleotide sugars 2
ppo01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 4
ppo04144 Endocytosis 3
ppo04145 Phagosome 3
ppo04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00010 Glycolysis / Gluconeogenesis 2
mtr00040 Pentose and glucuronate interconversions 2
mtr00053 Ascorbate and aldarate metabolism 2
mtr00561 Glycerolipid metabolism 2
mtr00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04145 Phagosome 2
mtr04517 IgSF CAM signaling 2
mtr04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00020 Citrate cycle (TCA cycle) 6
sly01200 Carbon metabolism 6
sly01210 2-Oxocarboxylic acid metabolism 4
sly03050 Proteasome 4
sly00785 Lipoic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 3
sot04626 Plant-pathogen interaction 3
sot03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 8
nta00010 Glycolysis / Gluconeogenesis 6
nta00020 Citrate cycle (TCA cycle) 6
nta00620 Pyruvate metabolism 6
nta00785 Lipoic acid metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 6
nta03010 Ribosome 2
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818859 103858023 103829338 106451240 106401347 106388283 107901460 107957763 102608475 102628987 100807980 100806167 547891 100254211 100247183 100244643 7486596 7492889 18095500 11406150 25485955 11410442 544114 544115 102600258 102596432 102600581 107820598 107821878 142172945 4325534
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