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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   EMB3105   Ribosomal L18p/L5e family protein 
 ath-r.7   EMB3105   Ribosomal L18p/L5e family protein 
 ath-m.9   EMB3105   Ribosomal L18p/L5e family protein 
 ath-e.2   EMB3105   Ribosomal L18p/L5e family protein 
 ath-m.4.bio   EMB3105   Ribosomal L18p/L5e family protein 
 ath-m.4.hor   EMB3105   Ribosomal L18p/L5e family protein 
 ath-m.4.lig   EMB3105   Ribosomal L18p/L5e family protein 
 ath-m.4.str   EMB3105   Ribosomal L18p/L5e family protein 
 ath-m.4.tis   EMB3105   Ribosomal L18p/L5e family protein 
 gma-u.5   100778569   50S ribosomal protein L18, chloroplastic 
 gma-u.5   100306308   50S ribosomal protein L18, chloroplastic 
 vvi-u.5   100261418   50S ribosomal protein L18-like 
 ppo-u.5   18110256   50S ribosomal protein L18, chloroplastic 
 mtr-u.5   11444979   50S ribosomal protein L18, chloroplastic 
 sly-u.5   101250874   50S ribosomal protein L18, chloroplastic 
 osa-u.5   4334651   50S ribosomal protein L18, chloroplastic-like 
 zma-u.5   100284921   50S ribosomal protein L18 

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Top 50 coexpressed genes to EMB3105 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to EMB3105 (ath-u.5 coexpression data)

CoexMap"841255"


athEMB3105 | Entrez gene ID : 841255      
Species ath gma vvi ppo mtr sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 9 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03010 [list] [network] Ribosome (394 genes)
GO BP
GO:0006412 [list] [network] translation  (926 genes)  IEA  
GO CC
GO:0009941 [list] [network] chloroplast envelope  (585 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (693 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA ISM  
GO:0005634 [list] [network] nucleus  (10367 genes)  HDA  
GO MF
Protein NP_175268.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for NP_175268.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_175268.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
EMB3105

.
ath-r.7
for
EMB3105

.
ath-m.9
for
EMB3105

.
ath-e.2
for
EMB3105

.
ath-m.4.bio
for
EMB3105

.
ath-m.4.hor
for
EMB3105

.
ath-m.4.lig
for
EMB3105

.
ath-m.4.str
for
EMB3105

.
ath-m.4.tis
for
EMB3105

.
gma-u.5
for
100778569

.
gma-u.5
for
100306308

.
vvi-u.5
for
100261418

.
ppo-u.5
for
18110256

.
mtr-u.5
for
11444979

.
sly-u.5
for
101250874

.
osa-u.5
for
4334651

.
zma-u.5
for
100284921

.


Ortholog ID: 10506
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol EMB3105 LOC100778569 LOC100306308 LOC101250874 LOC4334651 LOC100284921 LOC103833012 LOC100261418 LOC18110256 LOC11444979 LOC123114075 LOC123123574 LOC123453134 LOC107897860 LOC107913961 LOC106360543 LOC106422522 CHLRE_01g052100v5 LOC8079691 LOC102595549 LOC102611774 LOC100822205 LOC107830818 LOC107771278
Function* Ribosomal L18p/L5e family protein 50S ribosomal protein L18, chloroplastic 50S ribosomal protein L18, chloroplastic 50S ribosomal protein L18, chloroplastic 50S ribosomal protein L18, chloroplastic-like 50S ribosomal protein L18 50S ribosomal protein L18, chloroplastic 50S ribosomal protein L18-like 50S ribosomal protein L18, chloroplastic 50S ribosomal protein L18, chloroplastic 50S ribosomal protein L18, chloroplastic 50S ribosomal protein L18, chloroplastic 50S ribosomal protein L18, chloroplastic-like 50S ribosomal protein L18, chloroplastic 50S ribosomal protein L18, chloroplastic 50S ribosomal protein L18, chloroplastic-like 50S ribosomal protein L18, chloroplastic uncharacterized protein 50S ribosomal protein L18, chloroplastic 50S ribosomal protein L18, chloroplastic 50S ribosomal protein L18, chloroplastic-like 50S ribosomal protein L18, chloroplastic large ribosomal subunit protein uL18c large ribosomal subunit protein uL18c
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 12
ghi00260 Glycine, serine and threonine metabolism 2
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi00670 One carbon pool by folate 2
ghi00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 12
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841255 100778569 100306308 101250874 4334651 100284921 103833012 100261418 18110256 11444979 123114075 123123574 123453134 107897860 107913961 106360543 106422522 5715771 8079691 102595549 102611774 100822205 107830818 107771278
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