ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-u.5	AT1G54840	HSP20-like chaperones superfamily protein
ath-r.7	AT1G54840	HSP20-like chaperones superfamily protein
ath-m.9	AT1G54840	HSP20-like chaperones superfamily protein
ath-e.2	AT1G54840	HSP20-like chaperones superfamily protein
ath-m.4.bio	AT1G54840	HSP20-like chaperones superfamily protein
ath-m.4.hor	AT1G54840	HSP20-like chaperones superfamily protein
ath-m.4.lig	AT1G54840	HSP20-like chaperones superfamily protein
ath-m.4.str	AT1G54840	HSP20-like chaperones superfamily protein
ath-m.4.tis	AT1G54840	HSP20-like chaperones superfamily protein
gma-u.5	100775950	increased DNA methylation 2
gma-u.5	100785823	increased DNA methylation 2
mtr-u.5	11410748	increased DNA methylation 2
sly-u.5	101262870	increased DNA methylation 2

Annotation

functional annotation

KEGG

GO BP

GO:0006338 [list] [network] chromatin remodeling

(210 genes)

IMP

GO CC

GO:0005634 [list] [network] nucleus	(10367 genes)	IDA ISM
GO:0005737 [list] [network] cytoplasm	(14000 genes)	ISM

GO MF

GO:0005515 [list] [network] protein binding

(5363 genes)

IPI

Protein

NP_175881.2 [sequence] [blastp]
NP_974031.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, nucl 3, chlo 1, plas 1	(predict for NP_175881.2)
cyto 4, nucl 2, cyto_pero 2, cyto_E.R. 2	(predict for NP_974031.1)

Subcellular
localization
TargetP

other 8	(predict for NP_175881.2)
other 8	(predict for NP_974031.1)

Gene expression

All samples

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for AT1G54840	ath-r.7 for AT1G54840	ath-m.9 for AT1G54840	ath-e.2 for AT1G54840	ath-m.4.bio for AT1G54840	ath-m.4.hor for AT1G54840	ath-m.4.lig for AT1G54840	ath-m.4.str for AT1G54840	ath-m.4.tis for AT1G54840	gma-u.5 for 100775950	gma-u.5 for 100785823	mtr-u.5 for 11410748	sly-u.5 for 101262870