Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   HUB2   histone mono-ubiquitination 2 
 ath-r.7   HUB2   histone mono-ubiquitination 2 
 ath-m.9   HUB2   histone mono-ubiquitination 2 
 ath-e.2   HUB2   histone mono-ubiquitination 2 
 ath-m.4.bio   HUB2   histone mono-ubiquitination 2 
 ath-m.4.hor   HUB2   histone mono-ubiquitination 2 
 ath-m.4.lig   HUB2   histone mono-ubiquitination 2 
 ath-m.4.str   HUB2   histone mono-ubiquitination 2 
 ath-m.4.tis   HUB2   histone mono-ubiquitination 2 
 ath-u.5   HUB1   histone mono-ubiquitination 1 
 gma-u.5   100790744   E3 ubiquitin-protein ligase BRE1-like 1 
 gma-u.5   100811776   E3 ubiquitin-protein ligase BRE1-like 2 
 gma-u.5   100796610   E3 ubiquitin-protein ligase BRE1-like 2 
 vvi-u.5   100241021   E3 ubiquitin-protein ligase BRE1-like 1 
 vvi-u.5   100251829   E3 ubiquitin-protein ligase BRE1-like 2 
 ppo-u.5   7455740   E3 ubiquitin-protein ligase BRE1-like 2 
 ppo-u.5   7453935   E3 ubiquitin-protein ligase BRE1-like 1 
 mtr-u.5   11436813   E3 ubiquitin-protein ligase BRE1-like 1 
 mtr-u.5   11438680   E3 ubiquitin-protein ligase BRE1-like 2 
 mtr-u.5   25484108   E3 ubiquitin-protein ligase BRE1-like 2 
 sly-u.5   101254859   E3 ubiquitin-protein ligase BRE1-like 1 
 sly-u.5   101264751   E3 ubiquitin-protein ligase BRE1-like 2 
 osa-u.5   4336589   E3 ubiquitin-protein ligase BRE1-like 1 
 osa-u.5   4349420   E3 ubiquitin-protein ligase BRE1-like 2 
 zma-u.5   100274688   uncharacterized LOC100274688 
 zma-u.5   103629598   E3 ubiquitin-protein ligase BRE1-like 1 
 zma-u.5   103626393   E3 ubiquitin-protein ligase BRE1-like 1 

close


Top 50 coexpressed genes to HUB2 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to HUB2 (ath-u.5 coexpression data)

CoexMap"841968"


athHUB2 | Entrez gene ID : 841968      
Species ath gma vvi ppo mtr sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 10 3 2 2 3 2 2 3 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010162 [list] [network] seed dormancy process  (42 genes)  IMP  
GO:0009965 [list] [network] leaf morphogenesis  (103 genes)  IMP  
GO:0045087 [list] [network] innate immune response  (157 genes)  IGI  
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem  (186 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0140852 [list] [network] histone ubiquitin ligase activity  (2 genes)  IMP  
GO:0140936 [list] [network] histone H2B deubiquitinase activity  (6 genes)  IMP  
GO:0042803 [list] [network] protein homodimerization activity  (237 genes)  IPI  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001154428.1 [sequence] [blastp]
NP_001185233.1 [sequence] [blastp]
NP_001185234.1 [sequence] [blastp]
NP_001321104.1 [sequence] [blastp]
NP_564680.4 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 5,  cyto_nucl 5  (predict for NP_001154428.1)
nucl 7,  cyto 3  (predict for NP_001185233.1)
nucl 5,  cyto 5,  cyto_nucl 5  (predict for NP_001185234.1)
nucl 7,  cyto 3  (predict for NP_001321104.1)
nucl 7,  cyto 3  (predict for NP_564680.4)
Subcellular
localization
TargetP
other 9  (predict for NP_001154428.1)
other 7,  chlo 4  (predict for NP_001185233.1)
other 9  (predict for NP_001185234.1)
other 7,  chlo 4  (predict for NP_001321104.1)
other 7  (predict for NP_564680.4)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
HUB2

.
ath-r.7
for
HUB2

.
ath-m.9
for
HUB2

.
ath-e.2
for
HUB2

.
ath-m.4.bio
for
HUB2

.
ath-m.4.hor
for
HUB2

.
ath-m.4.lig
for
HUB2

.
ath-m.4.str
for
HUB2

.
ath-m.4.tis
for
HUB2

.
ath-u.5
for
HUB1

.
gma-u.5
for
100790744

.
gma-u.5
for
100811776

.
gma-u.5
for
100796610

.
vvi-u.5
for
100241021

.
vvi-u.5
for
100251829

.
ppo-u.5
for
7455740

.
ppo-u.5
for
7453935

.
mtr-u.5
for
11436813

.
mtr-u.5
for
11438680

.
mtr-u.5
for
25484108

.
sly-u.5
for
101254859

.
sly-u.5
for
101264751

.
osa-u.5
for
4336589

.
osa-u.5
for
4349420

.
zma-u.5
for
100274688

.
zma-u.5
for
103629598

.
zma-u.5
for
103626393

.


Ortholog ID: 1919
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol HUB1 HUB2 LOC100811776 LOC100790337 LOC101264751 LOC101254859 LOC4336589 LOC4349420 LOC100274688 LOC103629598 LOC103832600 LOC103866184 LOC100241021 LOC100251829 LOC18105143 LOC11436813 LOC25484108 LOC123063337 LOC123072319 LOC123404399 LOC123444859 LOC121219845 LOC121223688 LOC106443573 LOC106433603 CHLRE_14g625802v5 LOC8063816 LOC8066523 LOC102583070 LOC102579128 LOC102612288 LOC102624474 LOC100825148 LOC100828493 LOC107793416 LOC107793770
Function* histone mono-ubiquitination 1 histone mono-ubiquitination 2 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 2 uncharacterized LOC100274688 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 2 uncharacterized protein E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 2 E3 ubiquitin-protein ligase BRE1-like 1 E3 ubiquitin-protein ligase BRE1-like 2
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath03013 Nucleocytoplasmic transport 3
ath03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03083 Polycomb repressive complex 3
zma03013 Nucleocytoplasmic transport 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 3
bra03040 Spliceosome 3
bra03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae03013 Nucleocytoplasmic transport 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae03013 Nucleocytoplasmic transport 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 3
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 6
bdi03040 Spliceosome 4
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819104 841968 100811776 100790337 101264751 101254859 4336589 4349420 100274688 103629598 103832600 103866184 100241021 100251829 18105143 11436813 25484108 123063337 123072319 123404399 123444859 121219845 121223688 106443573 106433603 5718396 8063816 8066523 102583070 102579128 102612288 102624474 100825148 100828493 107793416 107793770
The preparation time of this page was 0.2 [sec].