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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT1G58220   Homeodomain-like superfamily protein 
 ath-r.7   AT1G58220   Homeodomain-like superfamily protein 
 ath-m.9   AT1G58220   Homeodomain-like superfamily protein 
 ath-e.2   AT1G58220   Homeodomain-like superfamily protein 
 ath-m.4.bio   AT1G58220   Homeodomain-like superfamily protein 
 ath-m.4.hor   AT1G58220   Homeodomain-like superfamily protein 
 ath-m.4.lig   AT1G58220   Homeodomain-like superfamily protein 
 ath-m.4.str   AT1G58220   Homeodomain-like superfamily protein 
 ath-m.4.tis   AT1G58220   Homeodomain-like superfamily protein 
 ath-u.5   AT1G09710   Homeodomain-like superfamily protein 
 bra-r.6   103871745   uncharacterized LOC103871745 
 bra-r.6   103838631   mucin-2 
 bra-r.6   103828832   cell wall protein AWA1 
 bna-r.1   106447359   mucin-2 
 bna-r.1   106346253   uncharacterized LOC106346253 
 bna-r.1   106366612   mucin-2-like 
 ghi-r.1   107917932   uncharacterized LOC107917932 
 ghi-r.1   107922340   uncharacterized LOC107922340 
 cit-r.1   102617361   uncharacterized LOC102617361 
 gma-u.5   100805773   uncharacterized LOC100805773 
 gma-u.5   100799956   uncharacterized LOC100799956 
 vvi-u.5   100245507   uncharacterized protein YMR317W 
 ppo-u.5   7467205   uncharacterized LOC7467205 
 mtr-u.5   11429657   mucin-17 
 mtr-u.5   25500638   uncharacterized LOC25500638 
 sly-u.5   101255687   uncharacterized LOC101255687 
 sly-u.5   101249442   uncharacterized LOC101249442 
 sot-r.1   102582625   translation initiation factor IF-2-like 
 sot-r.1   102605794   uncharacterized LOC102605794 
 nta-r.1   107777378   uncharacterized LOC107777378 
 nta-r.1   107783722   uncharacterized LOC107783722 
 nta-r.1   107796293   uncharacterized LOC107796293 
 osa-u.5   4329631   uncharacterized LOC4329631 
 zma-u.5   103653624   uncharacterized LOC103653624 
 zma-u.5   103627275   putative MYB DNA-binding domain superfamily protein 
 tae-r.2   123128683   mucin-5AC 
 tae-r.2   123138783   mucin-5AC 
 tae-r.2   123151719   nascent polypeptide-associated complex subunit alpha, muscle-specific form 
 hvu-r.1   123401172   mucin-5AC-like 
 hvu-r.1   123408783   uncharacterized LOC123408783 
 sbi-r.1   8084050   uncharacterized LOC8084050 
 bdi-r.1   100823787   uncharacterized LOC100823787 

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Top 50 coexpressed genes to AT1G58220 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G58220 (ath-u.5 coexpression data)

CoexMap"842189"


athAT1G58220 | Entrez gene ID : 842189      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 3 3 2 1 2 1 1 2 2 2 3 1 2 3 2 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009735 [list] [network] response to cytokinin  (124 genes)  IDA  
GO:0009733 [list] [network] response to auxin  (344 genes)  IDA  
GO CC
GO:0009986 [list] [network] cell surface  (15 genes)  IDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (716 genes)  IPI  
Protein NP_001321388.1 [sequence] [blastp]
NP_176118.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1,  plas 1  (predict for NP_001321388.1)
nucl 7,  chlo 2  (predict for NP_176118.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001321388.1)
other 8  (predict for NP_176118.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT1G58220
ath-r.7
for
AT1G58220
ath-m.9
for
AT1G58220
ath-e.2
for
AT1G58220
ath-m.4.bio
for
AT1G58220
ath-m.4.hor
for
AT1G58220
ath-m.4.lig
for
AT1G58220
ath-m.4.str
for
AT1G58220
ath-m.4.tis
for
AT1G58220
ath-u.5
for
AT1G09710
bra-r.6
for
103871745
bra-r.6
for
103838631
bra-r.6
for
103828832
bna-r.1
for
106447359
bna-r.1
for
106346253
bna-r.1
for
106366612
ghi-r.1
for
107917932
ghi-r.1
for
107922340
cit-r.1
for
102617361
gma-u.5
for
100805773
gma-u.5
for
100799956
vvi-u.5
for
100245507
ppo-u.5
for
7467205
mtr-u.5
for
11429657
mtr-u.5
for
25500638
sly-u.5
for
101255687
sly-u.5
for
101249442
sot-r.1
for
102582625
sot-r.1
for
102605794
nta-r.1
for
107777378
nta-r.1
for
107783722
nta-r.1
for
107796293
osa-u.5
for
4329631
zma-u.5
for
103653624
zma-u.5
for
103627275
tae-r.2
for
123128683
tae-r.2
for
123138783
tae-r.2
for
123151719
hvu-r.1
for
123401172
hvu-r.1
for
123408783
sbi-r.1
for
8084050
bdi-r.1
for
100823787


Ortholog ID: 4639
Species ath ath bra bra bra bna bna bna ghi ghi cit gma gma vvi ppo mtr mtr sly sly sot sot nta nta nta osa zma zma tae tae tae hvu hvu sbi bdi
Symbol AT1G58220 AT1G09710 LOC103871745 LOC103838631 LOC103828832 LOC106346253 LOC106366612 LOC106401294 LOC107917932 LOC107922340 LOC102617361 LOC100805773 LOC100799956 LOC100245507 LOC7467205 LOC11429657 LOC25500638 LOC101255687 LOC101249442 LOC102582625 LOC102605794 LOC107777378 LOC107783722 LOC107796293 LOC4329631 LOC103653624 LOC103627275 LOC123151719 LOC123156278 LOC123145813 LOC123401172 LOC123408783 LOC8084050 LOC100823787
Function* Homeodomain-like superfamily protein Homeodomain-like superfamily protein uncharacterized LOC103871745 mucin-2 cell wall protein AWA1 uncharacterized LOC106346253 mucin-2-like uncharacterized LOC106401294 uncharacterized LOC107917932 uncharacterized LOC107922340 uncharacterized LOC102617361 uncharacterized LOC100805773 uncharacterized LOC100799956 uncharacterized protein YMR317W uncharacterized LOC7467205 mucin-17 uncharacterized LOC25500638 uncharacterized LOC101255687 uncharacterized LOC101249442 translation initiation factor IF-2-like uncharacterized LOC102605794 uncharacterized LOC107777378 uncharacterized LOC107783722 uncharacterized LOC107796293 uncharacterized LOC4329631 uncharacterized LOC103653624 putative MYB DNA-binding domain superfamily protein nascent polypeptide-associated complex subunit alpha, muscle-specific form mucin-5AC mucin-17 mucin-5AC-like uncharacterized LOC123408783 uncharacterized LOC8084050 uncharacterized LOC100823787
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 5
bna00360 Phenylalanine metabolism 3
bna00650 Butanoate metabolism 3
bna01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 7
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 3
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04136 Autophagy - other 2
osa03040 Spliceosome 2
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 3
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
bdi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842189 837499 103871745 103838631 103828832 106346253 106366612 106401294 107917932 107922340 102617361 100805773 100799956 100245507 7467205 11429657 25500638 101255687 101249442 102582625 102605794 107777378 107783722 107796293 4329631 103653624 103627275 123151719 123156278 123145813 123401172 123408783 8084050 100823787
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