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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   ULP1D   UB-like protease 1D 
 ath-r.7   ULP1D   UB-like protease 1D 
 ath-m.9   ULP1D   UB-like protease 1D 
 ath-e.2   ULP1D   UB-like protease 1D 
 ath-m.4.bio   ULP1D   UB-like protease 1D 
 ath-m.4.hor   ULP1D   UB-like protease 1D 
 ath-m.4.lig   ULP1D   UB-like protease 1D 
 ath-m.4.str   ULP1D   UB-like protease 1D 
 ath-m.4.tis   ULP1D   UB-like protease 1D 
 ath-u.5   OTS2   Cysteine proteinases superfamily protein 
 gma-u.5   100790705   ubiquitin-like-specific protease 1D 
 vvi-u.5   100241600   ubiquitin-like-specific protease 1D 
 ppo-u.5   7492402   ubiquitin-like-specific protease 1D 
 mtr-u.5   25501331   ubiquitin-like-specific protease 1D 
 sly-u.5   101265226   ubiquitin-like-specific protease 1D 
 sly-u.5   101248380   ubiquitin-like-specific protease 1D 
 sly-u.5   101253587   ubiquitin-like-specific protease 1D 
 osa-u.5   4341072   ubiquitin-like-specific protease 1D 
 zma-u.5   100284466   uncharacterized LOC100284466 
 zma-u.5   100278454   Ubiquitin-like-specific protease 1D 

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Top 50 coexpressed genes to ULP1D (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to ULP1D (ath-u.5 coexpression data)

CoexMap"842317"


athULP1D | Entrez gene ID : 842317      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 10 1 1 1 1 3 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016926 [list] [network] protein desumoylation  (7 genes)  IDA  
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem  (186 genes)  IGI  
GO:0006508 [list] [network] proteolysis  (361 genes)  IDA  
GO:0009651 [list] [network] response to salt stress  (473 genes)  IGI  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0070139 [list] [network] SUMO-specific endopeptidase activity  (5 genes)  IDA  
Protein NP_176228.3 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 1,  cysk 1,  golg_plas 1  (predict for NP_176228.3)
Subcellular
localization
TargetP
other 8  (predict for NP_176228.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
ULP1D
ath-r.7
for
ULP1D
ath-m.9
for
ULP1D
ath-e.2
for
ULP1D
ath-m.4.bio
for
ULP1D
ath-m.4.hor
for
ULP1D
ath-m.4.lig
for
ULP1D
ath-m.4.str
for
ULP1D
ath-m.4.tis
for
ULP1D
ath-u.5
for
OTS2
gma-u.5
for
100790705
vvi-u.5
for
100241600
ppo-u.5
for
7492402
mtr-u.5
for
25501331
sly-u.5
for
101265226
sly-u.5
for
101248380
sly-u.5
for
101253587
osa-u.5
for
4341072
zma-u.5
for
100284466
zma-u.5
for
100278454


Ortholog ID: 4305
Species ath bra bra bna bna ghi ghi cit gma vvi ppo mtr sly sly sot sot nta nta osa zma zma tae tae hvu hvu sbi sbi bdi
Symbol ULP1D LOC103838514 LOC103849032 LOC106396553 LOC106381968 LOC107898669 LOC107933401 LOC102610189 LOC100790705 LOC100241600 LOC7492402 LOC25501331 LOC101265226 LOC101248380 LOC102602665 LOC102597295 LOC107801461 LOC107798935 LOC4341072 LOC100284466 LOC100278454 LOC123169622 LOC123150756 LOC123412491 LOC123444356 LOC8062159 LOC8072943 LOC100833641
Function* UB-like protease 1D ubiquitin-like-specific protease 1D ubiquitin-like-specific protease 1D ubiquitin-like-specific protease 1D ubiquitin-like-specific protease 1D ubiquitin-like-specific protease 1D ubiquitin-like-specific protease 1D ubiquitin-like-specific protease 1D ubiquitin-like-specific protease 1D ubiquitin-like-specific protease 1D ubiquitin-like-specific protease 1D ubiquitin-like-specific protease 1D ubiquitin-like-specific protease 1D ubiquitin-like-specific protease 1D ubiquitin-like-specific protease 1D ubiquitin-like-specific protease 1D ubiquitin-like-specific protease 1D ubiquitin-like-specific protease 1D ubiquitin-like-specific protease 1D uncharacterized LOC100284466 Ubiquitin-like-specific protease 1D ubiquitin-like-specific protease 1D ubiquitin-like-specific protease 1D ubiquitin-like-specific protease 1D ubiquitin-like-specific protease 1D ubiquitin-like-specific protease 1D ubiquitin-like-specific protease 1D ubiquitin-like-specific protease 1D
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 2
ghi03420 Nucleotide excision repair 2
ghi00340 Histidine metabolism 2
ghi03440 Homologous recombination 2
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 2
ghi03420 Nucleotide excision repair 2
ghi00340 Histidine metabolism 2
ghi03440 Homologous recombination 2
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
ppo03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta04016 MAPK signaling pathway - plant 2
nta04075 Plant hormone signal transduction 2
nta04120 Ubiquitin mediated proteolysis 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842317 103838514 103849032 106396553 106381968 107898669 107933401 102610189 100790705 100241600 7492402 25501331 101265226 101248380 102602665 102597295 107801461 107798935 4341072 100284466 100278454 123169622 123150756 123412491 123444356 8062159 8072943 100833641
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