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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   TPS04   terpene synthase 04 
 ath-r.7   TPS04   terpene synthase 04 
 ath-m.9   TPS04   terpene synthase 04 
 ath-e.2   TPS04   terpene synthase 04 
 ath-m.4.bio   TPS04   terpene synthase 04 
 ath-m.4.hor   TPS04   terpene synthase 04 
 ath-m.4.lig   TPS04   terpene synthase 04 
 ath-m.4.str   TPS04   terpene synthase 04 
 ath-m.4.tis   TPS04   terpene synthase 04 
 bra-r.6   103838542   (E,E)-geranyllinalool synthase 
 bra-r.6   103849658   (E,E)-geranyllinalool synthase 
 ghi-r.1   107914460   (E,E)-geranyllinalool synthase 
 ghi-r.1   107914127   (E,E)-geranyllinalool synthase 
 ghi-r.1   107905893   (E,E)-geranyllinalool synthase 
 cit-r.1   102615273   (E,E)-geranyllinalool synthase 
 sly-u.5   101262489   (E,E)-geranyllinalool synthase 
 sot-r.1   102599238   (E,E)-geranyllinalool synthase 
 nta-r.1   107812701   (E,E)-geranyllinalool synthase-like 
 nta-r.1   107814700   (E,E)-geranyllinalool synthase-like 

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Top 50 coexpressed genes to TPS04 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to TPS04 (ath-u.5 coexpression data)

CoexMap"842405"


athTPS04 | Entrez gene ID : 842405      
Species ath bra ghi cit sly sot nta vvi bdi osa tae bna ppo zma cre mtr sbi gma hvu
Paralog 9 2 3 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00904 [list] [network] Diterpenoid biosynthesis (25 genes)
GO BP
GO:0000304 [list] [network] response to singlet oxygen  (14 genes)  IEP  
GO:0080027 [list] [network] response to herbivore  (24 genes)  IEP  
GO:0016102 [list] [network] diterpenoid biosynthetic process  (46 genes)  IDA  
GO:0009753 [list] [network] response to jasmonic acid  (202 genes)  IGI  
GO:0009611 [list] [network] response to wounding  (271 genes)  IEP  
GO:0009617 [list] [network] response to bacterium  (500 genes)  IEP  
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO:0009536 [list] [network] plastid  (5443 genes)  IDA  
GO MF
GO:0080013 [list] [network] (E,E)-geranyllinalool synthase activity  (1 genes)  IDA  
Protein NP_564772.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 2,  cysk_nucl 1,  chlo 1,  cyto 1,  extr 1,  mito 1,  plas 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  cyto_pero 1,  E.R._plas 1,  mito_plas 1  (predict for NP_564772.1)
Subcellular
localization
TargetP
other 7  (predict for NP_564772.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
TPS04
ath-r.7
for
TPS04
ath-m.9
for
TPS04
ath-e.2
for
TPS04
ath-m.4.bio
for
TPS04
ath-m.4.hor
for
TPS04
ath-m.4.lig
for
TPS04
ath-m.4.str
for
TPS04
ath-m.4.tis
for
TPS04
bra-r.6
for
103838542
bra-r.6
for
103849658
ghi-r.1
for
107914460
ghi-r.1
for
107914127
ghi-r.1
for
107905893
cit-r.1
for
102615273
sly-u.5
for
101262489
sot-r.1
for
102599238
nta-r.1
for
107812701
nta-r.1
for
107814700


Ortholog ID: 12498
Species ath bra bra ghi ghi ghi cit sly sot nta nta
Symbol TPS04 LOC103838542 LOC103849658 LOC107914460 LOC107914127 LOC107905893 LOC102615273 LOC101262489 LOC102599238 LOC107812701 LOC107814700
Function* terpene synthase 04 (E,E)-geranyllinalool synthase (E,E)-geranyllinalool synthase (E,E)-geranyllinalool synthase (E,E)-geranyllinalool synthase (E,E)-geranyllinalool synthase (E,E)-geranyllinalool synthase (E,E)-geranyllinalool synthase (E,E)-geranyllinalool synthase (E,E)-geranyllinalool synthase-like (E,E)-geranyllinalool synthase-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00592 alpha-Linolenic acid metabolism 2
ath00904 Diterpenoid biosynthesis 2
ath00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00900 Terpenoid backbone biosynthesis 5
ghi04075 Plant hormone signal transduction 2
ghi00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 2
nta00071 Fatty acid degradation 2
nta00350 Tyrosine metabolism 2
nta00620 Pyruvate metabolism 2
nta01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842405 103838542 103849658 107914460 107914127 107905893 102615273 101262489 102599238 107812701 107814700
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