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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5  AT1G61980  Mitochondrial transcription termination factor family protein 
 ath-r.7  AT1G61980  Mitochondrial transcription termination factor family protein 
 ath-e.2  AT1G61980  Mitochondrial transcription termination factor family protein 
 ath-u.5  AT1G62085  Mitochondrial transcription termination factor family protein 
 bra-r.6  103838705  transcription termination factor MTERF4, chloroplastic-like 
 bna-r.1  106390966  transcription termination factor MTERF4, chloroplastic 
 bna-r.1  106429525  transcription termination factor MTERF4, chloroplastic-like 

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Top 50 coexpressed genes to AT1G61980 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G61980 (ath-u.5 coexpression data)

CoexMap"842493"


athAT1G61980 | Entrez gene ID : 842493
Species ath bra bna vvi bdi ppo sbi gma ghi cit hvu sot sly nta osa tae zma cre mtr
Paralog 4 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  HDA  
GO MF
GO:0003690 [list] [network] double-stranded DNA binding  (800 genes)  IEA  
Protein NP_001319290.1 [sequence] [blastp]
NP_001320795.1 [sequence] [blastp]
NP_176389.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo_mito 5,  chlo 4,  mito 4  (predict for NP_001319290.1)
chlo_mito 5,  chlo 4,  mito 4  (predict for NP_001320795.1)
chlo_mito 5,  chlo 4,  mito 4  (predict for NP_176389.1)
Subcellular
localization
TargetP
mito 8,  chlo 3  (predict for NP_001319290.1)
mito 8,  chlo 3  (predict for NP_001320795.1)
mito 8,  chlo 3  (predict for NP_176389.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT1G61980


ath-r.7
for
AT1G61980


ath-e.2
for
AT1G61980


ath-u.5
for
AT1G62085


bra-r.6
for
103838705


bna-r.1
for
106390966


bna-r.1
for
106429525



Ortholog ID: 13761
Species ath ath ath bra bna bna
Symbol AT1G62120 AT1G62110 AT1G62010 LOC103838705 LOC106390966 LOC106429525
Function* Mitochondrial transcription termination factor family protein Mitochondrial transcription termination factor family protein Mitochondrial transcription termination factor family protein transcription termination factor MTERF4, chloroplastic-like transcription termination factor MTERF4, chloroplastic transcription termination factor MTERF4, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
bna00230 Purine metabolism 5
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 5
bna03040 Spliceosome 4
bna00860 Porphyrin metabolism 2
bna03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842508 842507 842496 103838705 106390966 106429525
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