Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   XTH17   xyloglucan endotransglucosylase/hydrolase 17 
 ath-r.7   XTH17   xyloglucan endotransglucosylase/hydrolase 17 
 ath-m.9   XTH17   xyloglucan endotransglucosylase/hydrolase 17 
 ath-e.2   XTH17   xyloglucan endotransglucosylase/hydrolase 17 
 ath-m.4.bio   XTH17   xyloglucan endotransglucosylase/hydrolase 17 
 ath-m.4.hor   XTH17   xyloglucan endotransglucosylase/hydrolase 17 
 ath-m.4.lig   XTH17   xyloglucan endotransglucosylase/hydrolase 17 
 ath-m.4.str   XTH17   xyloglucan endotransglucosylase/hydrolase 17 
 ath-m.4.tis   XTH17   xyloglucan endotransglucosylase/hydrolase 17 
 ath-u.5   XTH18   xyloglucan endotransglucosylase/hydrolase 18 
 ath-u.5   XTH19   xyloglucan endotransglucosylase/hydrolase 19 
 ath-u.5   XTH20   xyloglucan endotransglucosylase/hydrolase 20 

close


Top 50 coexpressed genes to XTH17 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to XTH17 (ath-u.5 coexpression data)

CoexMap"842839"


athXTH17 | Entrez gene ID : 842839      
Species ath tae mtr osa zma bdi vvi sbi ppo bna sly nta cre sot hvu ghi gma cit bra
Paralog 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010411 [list] [network] xyloglucan metabolic process  (36 genes)  IDA  
GO CC
GO:0009505 [list] [network] plant-type cell wall  (504 genes)  HDA  
GO:0005576 [list] [network] extracellular region  (3158 genes)  ISM  
GO MF
GO:0033946 [list] [network] xyloglucan-specific endo-beta-1,4-glucanase activity  (6 genes)  IDA  
GO:0016762 [list] [network] xyloglucan:xyloglucosyl transferase activity  (25 genes)  IDA  
GO:0030247 [list] [network] polysaccharide binding  (96 genes)  ISS  
Protein NP_001321436.1 [sequence] [blastp]
NP_176710.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  chlo 2,  plas 1,  vacu 1  (predict for NP_001321436.1)
extr 5,  chlo 2,  nucl 1,  cyto 1,  vacu 1,  E.R. 1,  cyto_nucl 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for NP_176710.1)
Subcellular
localization
TargetP
other 6,  mito 5  (predict for NP_001321436.1)
scret 9  (predict for NP_176710.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
XTH17

.
ath-r.7
for
XTH17

.
ath-m.9
for
XTH17

.
ath-e.2
for
XTH17

.
ath-m.4.bio
for
XTH17

.
ath-m.4.hor
for
XTH17

.
ath-m.4.lig
for
XTH17

.
ath-m.4.str
for
XTH17

.
ath-m.4.tis
for
XTH17

.
ath-u.5
for
XTH18

.
ath-u.5
for
XTH19

.
ath-u.5
for
XTH20

.


Ortholog ID: 15217
Species ath ath bra bra bna bna
Symbol XTH20 XTH17 LOC103834678 LOC103861949 LOC106441042 LOC106384808
Function* xyloglucan endotransglucosylase/hydrolase 20 xyloglucan endotransglucosylase/hydrolase 17 probable xyloglucan endotransglucosylase/hydrolase protein 18 probable xyloglucan endotransglucosylase/hydrolase protein 18 probable xyloglucan endotransglucosylase/hydrolase protein 18 probable xyloglucan endotransglucosylase/hydrolase protein 18
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00940 Phenylpropanoid biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834859 842839 103834678 103861949 106441042 106384808
The preparation time of this page was 0.2 [sec].