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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   PIN3   Auxin efflux carrier family protein 
 ath-r.7   PIN3   Auxin efflux carrier family protein 
 ath-m.9   PIN3   Auxin efflux carrier family protein 
 ath-e.2   PIN3   Auxin efflux carrier family protein 
 ath-m.4.bio   PIN3   Auxin efflux carrier family protein 
 ath-m.4.hor   PIN3   Auxin efflux carrier family protein 
 ath-m.4.lig   PIN3   Auxin efflux carrier family protein 
 ath-m.4.str   PIN3   Auxin efflux carrier family protein 
 ath-m.4.tis   PIN3   Auxin efflux carrier family protein 
 ath-u.5   PIN4   Auxin efflux carrier family protein 
 ath-u.5   PIN7   Auxin efflux carrier family protein 
 bra-r.6   103831625   auxin efflux carrier component 3 
 bra-r.6   103854081   auxin efflux carrier component 4 
 bna-r.1   125581968   auxin efflux carrier component 4-like 
 bna-r.1   125576337   auxin efflux carrier component 3-like 
 bna-r.1   106439727   auxin efflux carrier component 3 
 ghi-r.1   107934295   auxin efflux carrier component 3 
 ghi-r.1   107922128   auxin efflux carrier component 4-like 
 cit-r.1   102631111   auxin efflux carrier component 3 
 gma-u.5   PIN3C   auxin efflux carrier component 3c 
 gma-u.5   PIN3B   auxin efflux carrier component 3b 
 gma-u.5   PIN3D   auxin efflux carrier component 3d 
 vvi-u.5   100268124   auxin efflux carrier component 3 
 ppo-u.5   7488396   auxin efflux carrier component 3 
 ppo-u.5   7475532   auxin efflux carrier component 3 
 mtr-u.5   25482498   auxin efflux carrier component 3 
 mtr-u.5   25493014   auxin efflux carrier component 4 
 sly-u.5   PIN4   auxin efflux carrier component 4 
 sly-u.5   PIN3   auxin efflux carrier component 3 
 sot-r.1   102579163   auxin efflux carrier component 3-like 
 sot-r.1   102583370   auxin efflux carrier component 7 
 nta-r.1   107832391   auxin efflux carrier component 3 
 nta-r.1   107789016   auxin efflux carrier component 3 
 osa-u.5   4326565   auxin efflux carrier component 3a-like 
 zma-u.5   100383548   uncharacterized LOC100383548 
 tae-r.2   123078653   auxin efflux carrier component 3a 
 tae-r.2   123061581   auxin efflux carrier component 3a 
 sbi-r.1   8054943   auxin efflux carrier component 3a 
 bdi-r.1   100826548   auxin efflux carrier component 3a 

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Top 50 coexpressed genes to PIN3 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PIN3 (ath-u.5 coexpression data)

CoexMap"843432"


athPIN3 | Entrez gene ID : 843432      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae sbi bdi cre hvu
Paralog 11 2 3 2 1 3 1 2 2 2 2 2 1 1 2 1 1 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0071469 [list] [network] cellular response to alkaline pH  (2 genes)  IDA  
GO:0010315 [list] [network] auxin export across the plasma membrane  (15 genes)  IDA IMP  
GO:0048766 [list] [network] root hair initiation  (20 genes)  IMP  
GO:0009958 [list] [network] positive gravitropism  (41 genes)  IMP  
GO:0010082 [list] [network] regulation of root meristem growth  (44 genes)  IGI  
GO:0009926 [list] [network] auxin polar transport  (72 genes)  IMP  
GO:0048767 [list] [network] root hair elongation  (80 genes)  IMP  
GO:0009630 [list] [network] gravitropism  (101 genes)  TAS  
GO:0009606 [list] [network] tropism  (133 genes)  IMP  
GO:0007389 [list] [network] pattern specification process  (208 genes)  IGI  
GO:0048364 [list] [network] root development  (600 genes)  IGI IMP  
GO:0009416 [list] [network] response to light stimulus  (776 genes)  IDA  
GO CC
GO:0016328 [list] [network] lateral plasma membrane  (5 genes)  IDA  
GO:0009986 [list] [network] cell surface  (15 genes)  IDA  
GO:0012506 [list] [network] vesicle membrane  (64 genes)  IDA  
GO:0005886 [list] [network] plasma membrane  (2598 genes)  IDA  
GO:0005739 [list] [network] mitochondrion  (4244 genes)  HDA  
GO MF
GO:0010329 [list] [network] auxin efflux transmembrane transporter activity  (16 genes)  IDA IMP  
GO:0042803 [list] [network] protein homodimerization activity  (237 genes)  IDA  
GO:0042802 [list] [network] identical protein binding  (414 genes)  IDA  
Protein NP_177250.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  plas 2,  nucl 1,  cyto 1,  vacu 1,  E.R. 1,  cyto_nucl 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for NP_177250.1)
Subcellular
localization
TargetP
scret 7  (predict for NP_177250.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
PIN3
ath-r.7
for
PIN3
ath-m.9
for
PIN3
ath-e.2
for
PIN3
ath-m.4.bio
for
PIN3
ath-m.4.hor
for
PIN3
ath-m.4.lig
for
PIN3
ath-m.4.str
for
PIN3
ath-m.4.tis
for
PIN3
ath-u.5
for
PIN4
ath-u.5
for
PIN7
bra-r.6
for
103831625
bra-r.6
for
103854081
bna-r.1
for
125581968
bna-r.1
for
125576337
bna-r.1
for
106439727
ghi-r.1
for
107934295
ghi-r.1
for
107922128
cit-r.1
for
102631111
gma-u.5
for
PIN3C
gma-u.5
for
PIN3B
gma-u.5
for
PIN3D
vvi-u.5
for
100268124
ppo-u.5
for
7488396
ppo-u.5
for
7475532
mtr-u.5
for
25482498
mtr-u.5
for
25493014
sly-u.5
for
PIN4
sly-u.5
for
PIN3
sot-r.1
for
102579163
sot-r.1
for
102583370
nta-r.1
for
107832391
nta-r.1
for
107789016
osa-u.5
for
4326565
zma-u.5
for
100383548
tae-r.2
for
123078653
tae-r.2
for
123061581
sbi-r.1
for
8054943
bdi-r.1
for
100826548


Ortholog ID: 4031
Species ath ath ath bra bra bna bna bna ghi ghi cit gma gma gma vvi ppo ppo mtr mtr sly sly sot sot nta nta nta osa zma tae tae sbi bdi
Symbol PIN3 PIN4 PIN7 LOC103854081 LOC103829294 LOC106439727 LOC106431006 LOC106388774 LOC107934295 LOC107922128 LOC102631111 PIN3C PIN3B PIN3D LOC100268124 LOC7488396 LOC7475532 LOC25482498 LOC25493014 PIN4 PIN3 LOC102579163 LOC102583370 LOC107832391 LOC107780185 LOC142166932 LOC4326565 LOC100383548 LOC123078653 LOC123061581 LOC8054943 LOC100826548
Function* Auxin efflux carrier family protein Auxin efflux carrier family protein Auxin efflux carrier family protein auxin efflux carrier component 4 auxin efflux carrier component 7 auxin efflux carrier component 3 auxin efflux carrier component 7-like auxin efflux carrier component 4 auxin efflux carrier component 3 auxin efflux carrier component 4-like auxin efflux carrier component 3 auxin efflux carrier component 3c auxin efflux carrier component 3b auxin efflux carrier component 3d auxin efflux carrier component 3 auxin efflux carrier component 3 auxin efflux carrier component 3 auxin efflux carrier component 3 auxin efflux carrier component 4 auxin efflux carrier component 4 auxin efflux carrier component 3 auxin efflux carrier component 3-like auxin efflux carrier component 7 auxin efflux carrier component 3 auxin efflux carrier component 7 auxin efflux carrier component 3-like auxin efflux carrier component 3a-like uncharacterized LOC100383548 auxin efflux carrier component 3a auxin efflux carrier component 3a auxin efflux carrier component 3a auxin efflux carrier component 3a
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
ath00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 3
bna00942 Anthocyanin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04082 Neuroactive ligand signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04082 Neuroactive ligand signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00564 Glycerophospholipid metabolism 2
cit00740 Riboflavin metabolism 2
cit04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 8
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 2
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00940 Phenylpropanoid biosynthesis 2
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 3
sly00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00380 Tryptophan metabolism 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00380 Tryptophan metabolism 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00380 Tryptophan metabolism 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843432 814670 838916 103854081 103829294 106439727 106431006 106388774 107934295 107922128 102631111 100807244 100802247 100791394 100268124 7488396 7475532 25482498 25493014 100527968 100527967 102579163 102583370 107832391 107780185 142166932 4326565 100383548 123078653 123061581 8054943 100826548
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