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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT1G71200   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-r.7   AT1G71200   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-e.2   AT1G71200   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 bra-r.6   103831644   transcription factor bHLH160 
 bra-r.6   103852708   transcription factor bHLH160 
 bna-r.1   106354132   transcription factor bHLH160-like 
 ghi-r.1   107894233   transcription factor bHLH160 
 ghi-r.1   107919056   uncharacterized LOC107919056 

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Top 50 coexpressed genes to AT1G71200 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G71200 (ath-u.5 coexpression data)

CoexMap"843460"


athAT1G71200 | Entrez gene ID : 843460      
Species ath bra bna ghi cre vvi ppo mtr hvu nta tae bdi osa gma zma sly cit sot sbi
Paralog 3 2 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0071280 [list] [network] cellular response to copper ion  (6 genes)  IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  TAS  
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
Protein NP_001322926.1 [sequence] [blastp]
NP_001322927.1 [sequence] [blastp]
NP_001322928.1 [sequence] [blastp]
NP_177276.4 [sequence] [blastp]
Subcellular
localization
wolf
vacu 3,  nucl 2,  chlo 1,  extr 1,  cyto_nucl 1,  nucl_plas 1,  E.R._vacu 1  (predict for NP_001322926.1)
golg 3,  nucl 2,  chlo 1,  vacu 1,  nucl_plas 1  (predict for NP_001322927.1)
chlo 5,  cyto 1,  extr 1,  vacu 1  (predict for NP_001322928.1)
nucl 6,  chlo 1,  cyto 1,  mito 1,  extr 1,  vacu 1  (predict for NP_177276.4)
Subcellular
localization
TargetP
chlo 5,  other 5  (predict for NP_001322926.1)
chlo 5,  other 4  (predict for NP_001322927.1)
other 4  (predict for NP_001322928.1)
chlo 5,  other 4  (predict for NP_177276.4)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT1G71200
ath-r.7
for
AT1G71200
ath-e.2
for
AT1G71200
bra-r.6
for
103831644
bra-r.6
for
103852708
bna-r.1
for
106354132
ghi-r.1
for
107894233
ghi-r.1
for
107919056


Ortholog ID: 15886
Species ath bra bra bna ghi ghi
Symbol AT1G71200 LOC103831644 LOC103852708 LOC106354132 LOC107894233 LOC107919056
Function* basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor bHLH160 transcription factor bHLH160 transcription factor bHLH160-like transcription factor bHLH160 uncharacterized LOC107919056
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 2
bra04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
bra04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843460 103831644 103852708 106354132 107894233 107919056
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