Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   OCT1   organic cation/carnitine transporter1 
 ath-r.7   OCT1   organic cation/carnitine transporter1 
 ath-m.9   OCT1   organic cation/carnitine transporter1 
 ath-e.2   OCT1   organic cation/carnitine transporter1 
 ath-m.4.bio   OCT1   organic cation/carnitine transporter1 
 ath-m.4.hor   OCT1   organic cation/carnitine transporter1 
 ath-m.4.lig   OCT1   organic cation/carnitine transporter1 
 ath-m.4.str   OCT1   organic cation/carnitine transporter1 
 ath-m.4.tis   OCT1   organic cation/carnitine transporter1 
 gma-u.5   100777344   organic cation/carnitine transporter 1 
 gma-u.5   100786967   organic cation/carnitine transporter 1 
 vvi-u.5   100268046   organic cation/carnitine transporter 1 
 ppo-u.5   18105616   organic cation/carnitine transporter 1 

close


Top 50 coexpressed genes to OCT1 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to OCT1 (ath-u.5 coexpression data)

CoexMap"843656"


athOCT1 | Entrez gene ID : 843656      
Species ath gma vvi ppo tae mtr osa hvu zma ghi bdi cit bra cre sbi bna sly nta sot
Paralog 9 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0015839 [list] [network] cadaverine transport  (2 genes)  IEP  
GO:0010150 [list] [network] leaf senescence  (128 genes)  IEP  
GO CC
GO:0005886 [list] [network] plasma membrane  (2598 genes)  IDA ISM  
GO MF
GO:0015226 [list] [network] carnitine transmembrane transporter activity  (2 genes)  IDA  
GO:0015144 [list] [network] carbohydrate transmembrane transporter activity  (87 genes)  ISS  
Protein NP_565059.2 [sequence] [blastp]
Subcellular
localization
wolf
plas 6,  E.R. 3,  nucl_plas 3,  golg_plas 3,  cysk_plas 3,  mito_plas 3  (predict for NP_565059.2)
Subcellular
localization
TargetP
other 8  (predict for NP_565059.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
OCT1

.
ath-r.7
for
OCT1

.
ath-m.9
for
OCT1

.
ath-e.2
for
OCT1

.
ath-m.4.bio
for
OCT1

.
ath-m.4.hor
for
OCT1

.
ath-m.4.lig
for
OCT1

.
ath-m.4.str
for
OCT1

.
ath-m.4.tis
for
OCT1

.
gma-u.5
for
100777344

.
gma-u.5
for
100786967

.
vvi-u.5
for
100268046

.
ppo-u.5
for
18105616

.


Ortholog ID: 12709
Species ath gma gma bra vvi ppo ghi bna bna
Symbol OCT1 LOC100786967 LOC100777344 LOC103831804 LOC100268046 LOC18105616 LOC107930970 LOC111199312 LOC106354256
Function* organic cation/carnitine transporter1 organic cation/carnitine transporter 1 organic cation/carnitine transporter 1 organic cation/carnitine transporter 1 organic cation/carnitine transporter 1 organic cation/carnitine transporter 1 organic cation/carnitine transporter 1 organic cation/carnitine transporter 1 organic cation/carnitine transporter 1
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843656 100786967 100777344 103831804 100268046 18105616 107930970 111199312 106354256
The preparation time of this page was 0.1 [sec].