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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT1G78895   Reticulon family protein 
 ath-r.7   AT1G78895   Reticulon family protein 
 ath-m.9   AT1G78895   Reticulon family protein 
 ath-e.2   AT1G78895   Reticulon family protein 
 ath-m.4.bio   AT1G78895   Reticulon family protein 
 ath-m.4.hor   AT1G78895   Reticulon family protein 
 ath-m.4.lig   AT1G78895   Reticulon family protein 
 ath-m.4.str   AT1G78895   Reticulon family protein 
 ath-m.4.tis   AT1G78895   Reticulon family protein 
 ath-u.5   AT1G16825   Reticulon family protein 
 gma-u.5   100800677   reticulon-like protein B22 
 vvi-u.5   100259765   reticulon-like protein B23 
 ppo-u.5   7490840   reticulon-like protein B22 
 mtr-u.5   25491164   reticulon-like protein B22 
 sly-u.5   101255520   reticulon-like protein B22 
 sly-u.5   101253796   reticulon-like protein B22 
 osa-u.5   4344975   reticulon-like protein B23 
 zma-u.5   100382184   uncharacterized LOC100382184 

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Top 50 coexpressed genes to AT1G78895 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G78895 (ath-u.5 coexpression data)

CoexMap"844227"


athAT1G78895 | Entrez gene ID : 844227      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 10 1 1 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein NP_565194.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  plas 2,  E.R. 2,  E.R._plas 2  (predict for NP_565194.1)
Subcellular
localization
TargetP
scret 6,  other 5  (predict for NP_565194.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT1G78895
ath-r.7
for
AT1G78895
ath-m.9
for
AT1G78895
ath-e.2
for
AT1G78895
ath-m.4.bio
for
AT1G78895
ath-m.4.hor
for
AT1G78895
ath-m.4.lig
for
AT1G78895
ath-m.4.str
for
AT1G78895
ath-m.4.tis
for
AT1G78895
ath-u.5
for
AT1G16825
gma-u.5
for
100800677
vvi-u.5
for
100259765
ppo-u.5
for
7490840
mtr-u.5
for
25491164
sly-u.5
for
101255520
sly-u.5
for
101253796
osa-u.5
for
4344975
zma-u.5
for
100382184


Ortholog ID: 8780
Species ath ath bra bna bna ghi ghi cit gma vvi ppo mtr sly sly sot sot nta nta osa zma tae tae hvu sbi bdi
Symbol AT1G16825 AT1G78895 LOC103842831 LOC106411890 LOC106413518 LOC107906362 LOC107958488 LOC102614304 LOC100800677 LOC100259765 LOC7490840 LOC25491164 LOC101255520 LOC101253796 LOC102583442 LOC102583013 LOC107782427 LOC107832349 LOC4344975 LOC100382184 LOC123136050 LOC123143505 LOC123403276 LOC8086060 LOC100842972
Function* Reticulon family protein Reticulon family protein reticulon-like protein B22 reticulon-like protein B22 reticulon-like protein B22 reticulon-like protein B22 reticulon-like protein B22 reticulon-like protein B22 reticulon-like protein B22 reticulon-like protein B23 reticulon-like protein B22 reticulon-like protein B22 reticulon-like protein B22 reticulon-like protein B22 reticulon-like protein B22 reticulon-like protein B22 reticulon-like protein B22 reticulon-like protein B22 reticulon-like protein B23 uncharacterized LOC100382184 reticulon-like protein B23 reticulon-like protein B23 reticulon-like protein B23 reticulon-like protein B23 reticulon-like protein B23
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 3
ath04145 Phagosome 3
ath04148 Efferocytosis 3
ath04517 IgSF CAM signaling 2
ath04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 2
bna03082 ATP-dependent chromatin remodeling 2
bna03410 Base excision repair 2
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 3
bna03082 ATP-dependent chromatin remodeling 3
bna03410 Base excision repair 3
bna03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04142 Lysosome 3
cit00190 Oxidative phosphorylation 3
cit04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 4
ppo04142 Lysosome 4
ppo04145 Phagosome 4
ppo04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00900 Terpenoid backbone biosynthesis 6
nta00020 Citrate cycle (TCA cycle) 4
nta00280 Valine, leucine and isoleucine degradation 4
nta00650 Butanoate metabolism 4
nta00071 Fatty acid degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03082 ATP-dependent chromatin remodeling 2
nta00510 N-Glycan biosynthesis 2
nta00513 Various types of N-glycan biosynthesis 2
nta03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 3
tae00260 Glycine, serine and threonine metabolism 3
tae01200 Carbon metabolism 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 3
bdi04141 Protein processing in endoplasmic reticulum 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7922362 844227 103842831 106411890 106413518 107906362 107958488 102614304 100800677 100259765 7490840 25491164 101255520 101253796 102583442 102583013 107782427 107832349 4344975 100382184 123136050 123143505 123403276 8086060 100842972
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