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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   9272621   protein indeterminate-domain 5, chloroplastic 
 osa-r.6   9272621   protein indeterminate-domain 5, chloroplastic 
 osa-e.1   9272621   protein indeterminate-domain 5, chloroplastic 
 osa-u.5   4330280   zinc finger protein GAI-ASSOCIATED FACTOR 1 
 osa-u.5   4346276   protein indeterminate-domain 6, chloroplastic 
 tae-r.2   123122571   protein indeterminate-domain 5, chloroplastic 
 tae-r.2   123137657   zinc finger protein BALDIBIS 
 tae-r.2   123104761   protein indeterminate-domain 5, chloroplastic 
 hvu-r.1   123400994   protein indeterminate-domain 5, chloroplastic-like 
 hvu-r.1   123427488   protein indeterminate-domain 4, chloroplastic-like 
 hvu-r.1   123451926   protein indeterminate-domain 5, chloroplastic-like 
 bdi-r.1   100834360   protein indeterminate-domain 5, chloroplastic 
 bdi-r.1   100826618   protein indeterminate-domain 5, chloroplastic 
 bdi-r.1   100830824   protein indeterminate-domain 12 
 zma-u.5   103647648   protein indeterminate-domain 6, chloroplastic 
 zma-u.5   542197   INDETERMINATE-related protein 10 
 zma-u.5   100304401   naked endosperm2 
 sbi-r.1   8057591   protein indeterminate-domain 5, chloroplastic 
 sbi-r.1   8077242   protein indeterminate-domain 5, chloroplastic 
 sbi-r.1   8077243   protein indeterminate-domain 9 
 ath-u.5   AT1G14580   C2H2-like zinc finger protein 
 ath-u.5   IDD5   indeterminate(ID)-domain 5 
 ath-u.5   IDD4   indeterminate(ID)-domain 4 
 gma-u.5   100786121   protein indeterminate-domain 5, chloroplastic 
 gma-u.5   100795090   protein indeterminate-domain 4, chloroplastic 
 gma-u.5   100799389   protein indeterminate-domain 5, chloroplastic 
 sly-u.5   101253219   protein indeterminate-domain 4, chloroplastic-like 
 sly-u.5   101254782   protein indeterminate-domain 5, chloroplastic 
 bra-r.6   103836067   protein indeterminate-domain 6, chloroplastic 
 bra-r.6   103827531   protein indeterminate-domain 4, chloroplastic 
 bra-r.6   103827532   protein indeterminate-domain 5, chloroplastic 
 vvi-u.5   100257993   protein indeterminate-domain 5, chloroplastic 
 vvi-u.5   100251079   protein indeterminate-domain 5, chloroplastic 
 ppo-u.5   7462634   protein indeterminate-domain 5, chloroplastic 
 ppo-u.5   18102534   protein indeterminate-domain 5, chloroplastic 
 ppo-u.5   18101539   protein indeterminate-domain 5, chloroplastic 
 mtr-u.5   25484913   protein indeterminate-domain 4, chloroplastic 
 mtr-u.5   25482698   protein indeterminate-domain 5, chloroplastic 
 mtr-u.5   25485591   protein indeterminate-domain 5, chloroplastic 
 ghi-r.1   107918109   protein indeterminate-domain 5, chloroplastic 
 ghi-r.1   107886329   protein indeterminate-domain 5, chloroplastic 
 ghi-r.1   107909938   protein indeterminate-domain 5, chloroplastic 
 bna-r.1   106362113   protein indeterminate-domain 6, chloroplastic-like 
 bna-r.1   106391298   protein indeterminate-domain 4, chloroplastic 
 bna-r.1   106359885   protein indeterminate-domain 5, chloroplastic 
 sot-r.1   102591583   protein indeterminate-domain 4, chloroplastic-like 
 sot-r.1   102586049   protein indeterminate-domain 5, chloroplastic-like 
 cit-r.1   102609726   protein indeterminate-domain 5, chloroplastic-like 
 nta-r.1   107759071   uncharacterized LOC107759071 
 nta-r.1   107826816   protein indeterminate-domain 4, chloroplastic 
 nta-r.1   107803539   uncharacterized LOC107803539 

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Top 50 coexpressed genes to 9272621 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 9272621 (osa-u.5 coexpression data)

CoexMap"9272621"


osaLOC9272621 | Entrez gene ID : 9272621      
Species osa tae hvu bdi zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 5 3 3 3 3 3 3 3 2 3 2 3 3 3 3 2 1 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (3003 genes)  IEA  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1113 genes)  IEA  
Protein XP_015612461.1 [sequence] [blastp]
XP_015612462.1 [sequence] [blastp]
XP_015612463.1 [sequence] [blastp]
XP_015612465.1 [sequence] [blastp]
XP_015612466.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  pero 4,  chlo 1  (predict for XP_015612461.1)
nucl 4,  pero 4,  chlo 1  (predict for XP_015612462.1)
nucl 4,  pero 4,  chlo 1  (predict for XP_015612463.1)
nucl 4,  pero 4,  chlo 1  (predict for XP_015612465.1)
nucl 4,  pero 4,  chlo 1  (predict for XP_015612466.1)
Subcellular
localization
TargetP
chlo 7,  other 3  (predict for XP_015612461.1)
chlo 7,  other 3  (predict for XP_015612462.1)
chlo 7,  other 3  (predict for XP_015612463.1)
chlo 7,  other 3  (predict for XP_015612465.1)
chlo 7,  other 3  (predict for XP_015612466.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
9272621
osa-r.6
for
9272621
osa-e.1
for
9272621
osa-u.5
for
4330280
osa-u.5
for
4346276
tae-r.2
for
123122571
tae-r.2
for
123137657
tae-r.2
for
123104761
hvu-r.1
for
123400994
hvu-r.1
for
123427488
hvu-r.1
for
123451926
bdi-r.1
for
100834360
bdi-r.1
for
100826618
bdi-r.1
for
100830824
zma-u.5
for
103647648
zma-u.5
for
542197
zma-u.5
for
100304401
sbi-r.1
for
8057591
sbi-r.1
for
8077242
sbi-r.1
for
8077243
ath-u.5
for
AT1G14580
ath-u.5
for
IDD5
ath-u.5
for
IDD4
gma-u.5
for
100786121
gma-u.5
for
100795090
gma-u.5
for
100799389
sly-u.5
for
101253219
sly-u.5
for
101254782
bra-r.6
for
103836067
bra-r.6
for
103827531
bra-r.6
for
103827532
vvi-u.5
for
100257993
vvi-u.5
for
100251079
ppo-u.5
for
7462634
ppo-u.5
for
18102534
ppo-u.5
for
18101539
mtr-u.5
for
25484913
mtr-u.5
for
25482698
mtr-u.5
for
25485591
ghi-r.1
for
107918109
ghi-r.1
for
107886329
ghi-r.1
for
107909938
bna-r.1
for
106362113
bna-r.1
for
106391298
bna-r.1
for
106359885
sot-r.1
for
102591583
sot-r.1
for
102586049
cit-r.1
for
102609726
nta-r.1
for
107759071
nta-r.1
for
107826816
nta-r.1
for
107803539


Ortholog ID: 1119
Species osa osa tae tae tae hvu hvu hvu bdi bdi bdi zma zma zma sbi sbi sbi ath ath ath gma gma gma sly sly bra bra bra vvi vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna sot sot cit nta nta nta
Symbol LOC9272621 LOC4330280 LOC123190047 LOC123054157 LOC123113052 LOC123400994 LOC123427488 LOC123451926 LOC100834360 LOC100826618 LOC100830824 LOC103647648 LOC100304401 LOC542697 LOC8077242 LOC8073914 LOC8058010 AT1G14580 IDD5 IDD4 LOC100806198 LOC100807789 LOC100818072 LOC101253219 LOC101254782 LOC103827531 LOC103827532 LOC103842959 LOC100257993 LOC100251079 LOC18102534 LOC18101539 LOC18101538 LOC25484913 LOC25485591 LOC112422592 LOC107918109 LOC107918110 LOC107922476 LOC106362113 LOC106391298 LOC106401355 LOC102591583 LOC102586049 LOC102609726 LOC107826816 LOC107803539 LOC107821082
Function* protein indeterminate-domain 5, chloroplastic zinc finger protein GAI-ASSOCIATED FACTOR 1 protein indeterminate-domain 4, chloroplastic protein indeterminate-domain 4, chloroplastic protein indeterminate-domain 5, chloroplastic protein indeterminate-domain 5, chloroplastic-like protein indeterminate-domain 4, chloroplastic-like protein indeterminate-domain 5, chloroplastic-like protein indeterminate-domain 5, chloroplastic protein indeterminate-domain 5, chloroplastic protein indeterminate-domain 12 protein indeterminate-domain 6, chloroplastic naked endosperm2 indeterminate domain p1 protein indeterminate-domain 5, chloroplastic protein indeterminate-domain 4, chloroplastic protein indeterminate-domain 5, chloroplastic C2H2-like zinc finger protein indeterminate(ID)-domain 5 indeterminate(ID)-domain 4 protein indeterminate-domain 5, chloroplastic protein indeterminate-domain 5, chloroplastic protein indeterminate-domain 5, chloroplastic protein indeterminate-domain 4, chloroplastic-like protein indeterminate-domain 5, chloroplastic protein indeterminate-domain 4, chloroplastic protein indeterminate-domain 5, chloroplastic protein indeterminate-domain 6, chloroplastic-like protein indeterminate-domain 5, chloroplastic protein indeterminate-domain 5, chloroplastic protein indeterminate-domain 5, chloroplastic protein indeterminate-domain 5, chloroplastic protein indeterminate-domain 5, chloroplastic protein indeterminate-domain 4, chloroplastic protein indeterminate-domain 5, chloroplastic protein indeterminate-domain 5, chloroplastic protein indeterminate-domain 5, chloroplastic protein indeterminate-domain 4, chloroplastic protein indeterminate-domain 5, chloroplastic protein indeterminate-domain 6, chloroplastic-like protein indeterminate-domain 4, chloroplastic protein indeterminate-domain 5, chloroplastic protein indeterminate-domain 4, chloroplastic-like protein indeterminate-domain 5, chloroplastic-like protein indeterminate-domain 5, chloroplastic-like protein indeterminate-domain 4, chloroplastic uncharacterized LOC107803539 protein indeterminate-domain 4, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00944 Flavone and flavonol biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00240 Pyrimidine metabolism 2
tae01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04016 MAPK signaling pathway - plant 2
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00380 Tryptophan metabolism 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00010 Glycolysis / Gluconeogenesis 2
zma00620 Pyruvate metabolism 2
zma00710 Carbon fixation by Calvin cycle 2
zma01200 Carbon metabolism 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 3
zma00480 Glutathione metabolism 2
zma00010 Glycolysis / Gluconeogenesis 2
zma00620 Pyruvate metabolism 2
zma00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 3
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
ghi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00460 Cyanoamino acid metabolism 2
bna00500 Starch and sucrose metabolism 2
bna00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00053 Ascorbate and aldarate metabolism 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00030 Pentose phosphate pathway 2
nta00051 Fructose and mannose metabolism 2
nta00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 2
nta00941 Flavonoid biosynthesis 2
nta00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 9272621 4330280 123190047 123054157 123113052 123400994 123427488 123451926 100834360 100826618 100830824 103647648 100304401 542697 8077242 8073914 8058010 838020 814738 814739 100806198 100807789 100818072 101253219 101254782 103827531 103827532 103842959 100257993 100251079 18102534 18101539 18101538 25484913 25485591 112422592 107918109 107918110 107922476 106362113 106391298 106401355 102591583 102586049 102609726 107826816 107803539 107821082
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