Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.tis   PME1   pectin methylesterase inhibitor 1 
 ath-u.4   PME1   pectin methylesterase inhibitor 1 
 ath-r.6   PME1   pectin methylesterase inhibitor 1 
 ath-m.9   PME1   pectin methylesterase inhibitor 1 
 ath-m.4.notissue   PME1   pectin methylesterase inhibitor 1 
 ath-m.4.str   PME1   pectin methylesterase inhibitor 1 
 ath-m.4.hor   PME1   pectin methylesterase inhibitor 1 
 ath-m.4.bio   PME1   pectin methylesterase inhibitor 1 
 ath-m.4.lig   PME1   pectin methylesterase inhibitor 1 
 ath-e.1   PME1   pectin methylesterase inhibitor 1 
 ath-u.4   AT1G62770   Plant invertase/pectin methylesterase inhibitor superfamily protein 
 ath-u.4   AT1G14890   Plant invertase/pectin methylesterase inhibitor superfamily protein 
 gma-u.4   100797734   pectinesterase inhibitor 7 
 gma-u.4   100810071   21 kDa protein 
 ppo-u.4   18094388   pectinesterase inhibitor 10 
 ppo-u.4   18094389   pectinesterase inhibitor 9 
 mtr-u.4   25494098   21 kDa protein 
 mtr-u.4   112421176   21 kDa protein-like 
 mtr-u.4   25491837   21 kDa protein 
 sly-u.4   101248953   21 kDa protein-like 
 osa-u.4   4342040   21 kDa protein 

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Top 50 coexpressed genes to PME1 (ath-m.4.tis coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath908   Zeatin biosynthesis  2 32 -
 ath480   Glutathione metabolism  3 103 -
 ath4016   MAPK signaling pathway - plant  2 139 -
 ath1240   Biosynthesis of cofactors  2 236 -
 ath4075   Plant hormone signal transduction  3 291 -

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ath:PME1 (pectin methylesterase inhibitor 1) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition specific* Reference

ath-m.4.tis
for
PME1
ath-u.4
for
PME1
ath-r.6
for
PME1
ath-m.9
for
PME1
ath-m.4.notissue
for
PME1
ath-m.4.str
for
PME1
ath-m.4.hor
for
PME1
ath-m.4.bio
for
PME1
ath-m.4.lig
for
PME1
ath-e.1
for
PME1
ath-u.4
for
AT1G62770
ath-u.4
for
AT1G14890
gma-u.4
for
100797734
gma-u.4
for
100810071
ppo-u.4
for
18094388
ppo-u.4
for
18094389
mtr-u.4
for
25494098
mtr-u.4
for
112421176
mtr-u.4
for
25491837
sly-u.4
for
101248953
osa-u.4
for
4342040
1 AT5G45480 transmembrane protein, putative (DUF594) 834584 At5g45480 5.3

1.5
 2451.5
 1.2
 1.7
 -0.5
 -0.5
0.4
0.4
 1.2
0.1
 -0.2
-0.8
 1.4
-0.8
 0.1
-0.1
 1.1
1.0
 -0.8
-1.0
 0.8
-0.2
 1.3
0.7
 0.4
 0.2
-0.9
2 ZW9 TRAF-like family protein 842196 At1g58270 4.6 0.5
 0.3
 0.7
 17767.5
 -1.6
 -1.1
 -1.0
 1.2
 -1.3
 2.5
1.4
 1.9
1.3
 -0.7
 0.8
 0.8
-0.2
 0.5
0.4
 -0.4
-1.1
 1.2
-0.6
 0.3
0.2

3 AMT1;2 ammonium transporter 1;2 842786 At1g64780 4.5 3.5
 3.0
 3.1
 121.4
 3.0
 3.8
 1.4
 1.8
 2.6
 0.4
-0.7
 -0.5
-1.2

0.5
0.1
 0.4
-0.1
 0.6
-0.8
 -0.3
-0.9
 -0.4
-0.9
 0.5
-0.3
 0.6
0.2
4 AGP16 arabinogalactan protein 16 819241 At2g46330 4.3 0.2
 0.9
 -0.5
 2451.9
 1.5
 0.4
 -0.6
 -1.0
 -0.4
 0.1
0.0
 -0.6
-0.7
 1.7
0.8
 0.8
0.8
 -0.2
-0.4
 0.3
-0.1
 -0.5
 -1.5
 -1.3
 0.7
-0.4
 0.8
0.0
5 UPM1 urophorphyrin methylase 1 834085 At5g40850 4.3 0.7
 1.0
 0.2
 677.7
 1.5
 1.8
 1.7
 1.1
 1.4
 -1.4
 -1.9
 -0.8
-0.8
 -0.3
-0.8
 0.3
 -0.5
 -0.2
-0.5
 0.6
0.5
 -1.2
-1.3
 1.1
 -0.3
6 CLV1 Leucine-rich receptor-like protein kinase family protein 843915 At1g75820 4.3 1.3
 0.8
 1.4
 1640.6
 0.9
 1.5
 1.3
 0.7
 -1.1
 0.9
 0.9
 1.2
0.9
 0.1
-0.4
 -0.8
 0.1
 0.7
0.4
 -1.2
-1.4
 2.2
1.4
 -0.2
 -1.0
7 AT1G17970 RING/U-box superfamily protein 838377 At1g17970 4.2 -0.3
 0.3
 -0.8
 6915.2
 -0.3
 -0.3
 0.9
 1.6
 -0.6
 0.9
-0.9
 1.5
-0.2
 1.2
-0.3
 0.8
0.5
 -0.3
-0.6
 0.2
-1.1
 1.4
1.4
 0.5
-0.9
 -0.6
-0.7
 1.3
-0.5
 0.7
0.1
8 WRKY7 WRKY DNA-binding protein 7 828525 At4g24240 4.2 0.9
 0.0
 1.5
 4996.1
 1.0
 1.7
 -0.7
 1.5
 0.7
 1.4
0.7
 1.2
0.8
 1.3
1.0
 -0.1
-0.3
 0.8
0.2
 -0.7
-1.0
 1.4
0.8
 0.2
-0.1
 -0.5
-0.8
 0.4
0.2
9 TIM23-2 translocase inner membrane subunit 23-2 843607 At1g72750 4.2 -0.1
 -0.3
 0.1
 17301.2
 -0.5
 0.5
 -1.5
 -1.0
 1.3
 1.1
0.3
 1.5
-1.0
 1.1
1.0
 0.7
-0.0
 -0.6
-0.6
 0.1
-0.2
 1.6
1.0
 0.7
-0.9
 0.3
-0.5
 -0.3
-1.0
 2.0
0.4
10 HIPL2 hipl2 protein precursor 836384 At5g62630 4.1 1.6
 1.6
 1.1
 14912.2
 -1.2
 1.4
 0.6
 1.1
 -1.6
 -1.0
 -0.1








11 UGT76C2 UDP-glucosyl transferase 76C2 830471 At5g05860 4.1 2.0
 1.5
 2.0
 239.3
 2.9
 0.6
 1.6
 1.4
 0.6
 3.4
2.1
 1.0
1.0
 0.3
-0.3
 0.6
0.2
 0.8
-0.1
 0.1
-0.2
 -0.4
-1.3
 1.0
0.4
 1.7
0.2
 0.9
-0.0
 0.5
-0.8
12 AT3G26450 Polyketide cyclase/dehydrase and lipid transport superfamily protein 822250 At3g26450 4.1

1.2
 6868.2
 0.1
 -0.4
 1.2
 1.3
1.5
0.8
 1.2
0.9
 -0.5
 -0.7
 0.7
0.7
 -0.1
-0.5
 -0.4
 -0.9
 2.1

13 LBD39 LOB domain-containing protein 39 829909 At4g37540 4.1 3.0
 1.8
 3.4
 97.7
 2.6
 2.3
 2.2
 1.1
 0.8
 -0.1
-0.4
 2.2
1.0
 1.3
1.2
 0.7
0.4
 0.5
-0.3
 1.2
1.0
 0.5
0.4
 0.7
0.3
 1.0
0.5
 0.8
-0.1
 1.2
0.2
14 GSTU27 glutathione S-transferase tau 27 823491 At3g43800 4.0 2.3
 2.6
 1.4
 136.9
 2.5
 2.1
 1.7
 1.7
 0.7
 -0.4
 -1.1








15 ARR4 response regulator 4 837587 At1g10470 4.0 1.1
 1.1
 0.9
 351.4
 3.5
 0.1
 1.7
 1.0
 -0.4
 0.6
0.1
 0.9
0.7
 -0.0
-0.0
 -0.1
-0.1
 0.3
-0.4
 0.9
-0.2
 0.7
0.5
 -0.2
-0.7
 0.6
0.4
 1.4
-0.4
 -0.0
16 AT1G33080 MATE efflux family protein 840204 At1g33080 4.0 2.4
 2.4
 1.8
 4970.6
 0.4
 -1.2
 1.3
 0.3
 1.4
 -1.0
-1.2
 0.1
0.1
 1.7
0.6
 0.5
0.4
 0.5
 1.0
 -0.3
-0.6
 1.6
-0.4
 -0.0
-0.8
 -0.3
-0.3
 0.3
-0.1
17 CYP721A1 cytochrome P450, family 721, subfamily A, polypeptide 1 843850 At1g75130 4.0 0.1
 0.1
 0.1
 1221.9
 1.5
 1.6
 1.1
 -0.1
 -0.1
 -0.2
 0.2
 -0.1
 -0.8
 0.1
-0.1
 0.1
-0.9
 0.2
-0.8
 1.3
0.5
 0.1
-0.2
 0.4
0.2
 0.1
18 LCR Galactose oxidase/kelch repeat superfamily protein 839623 At1g27340 4.0 2.0
 1.5
 2.0
 156.6
 1.9
 2.2
 3.1
 2.2
 1.0
 -0.4
 0.4
 0.5
0.0
 0.9
0.2
 0.5
0.1
 0.4
0.1
 0.0
 -1.6
 -0.4
 -0.9
 0.1
19 AT2G15760 calmodulin-binding protein (DUF1645) 816070 At2g15760 4.0 1.6
 1.3
 1.5
 18556.3
 -0.1
 -0.7
 -1.5
 0.4
 0.9
 0.0
-1.2
 0.3
0.1
 1.1
0.5
 0.5
0.5
 0.3
0.3
 -0.6
-1.0
 -0.0
-0.2
 0.4
0.3
 0.6
-0.3
 1.2
0.1
 -0.6
20 PYL1 PYR1-like 1 834722 At5g46790 3.9 3.6
 2.9
 3.3
 31.3
 3.7
 2.6
 1.3
 2.9
 2.2
 0.0
-0.0
 -0.3
-0.5
 1.5
1.1
 -0.2
-0.3
 -0.1
 0.5
 1.4
 0.2
 2.0
 1.5
1.2
 1.0
21 AT5G07870 HXXXD-type acyl-transferase family protein 830680 At5g07870 3.9 -0.1
 -0.1
 -0.1
 3857.6
 1.1
 -0.4
 0.8
 -0.4
 -0.7
 0.5
-0.3
 1.0
0.7
 1.3
1.1
 0.6
0.3
 0.4
 -0.4
 -0.3
-0.5
 1.1
0.5
 0.5
0.3
 -0.1
 -0.4
-0.7
22 AT5G23820 MD-2-related lipid recognition domain-containing protein 832447 At5g23820 3.9 1.2
 0.5
 1.5
 2447.1
 1.4
 0.6
 0.4
 1.2
 -0.1
 1.0
0.6
 0.2
-0.3








23 AT1G21050 MIZU-KUSSEI-like protein (Protein of unknown function, DUF617) 838699 At1g21050 3.9 3.9
 4.0
 2.8
 694.7
 1.9
 1.5
 0.9
 -0.6
 1.1
 -0.4
 2.1

0.3
 -0.3




24 AT4G25260 Plant invertase/pectin methylesterase inhibitor superfamily protein 828629 At4g25260 3.8 1.1
 1.1
 0.7
 2901.3
 2.5
 0.3
 -0.4
 -1.9
 0.3
 3.5
2.8
 3.1
2.7
 2.2
1.3
 1.0
1.0
 2.0
0.9
 0.5
0.4
 13.1
1.5
 1.5
0.8
 4.2
1.7
 3.6
3.5
25 AT5G44020 HAD superfamily, subfamily IIIB acid phosphatase 834425 At5g44020 3.8 0.4
 0.5
 0.2
 1731.8
 1.6
 0.7
 1.1
 -1.8
 0.3
 0.7
-0.9
 0.0
-1.2
 -0.1
-0.5
 1.4
1.4
 0.6
 -0.4
 -0.1
-0.5
 2.3
2.1
 0.7
0.1
 1.0
26 RCAR3 regulatory components of ABA receptor 3 835397 At5g53160 3.8 1.4
 1.2
 1.2
 1409.5
 1.1
 1.3
 2.4
 -0.6
 0.7
 0.5
0.4
 2.7
1.6
 0.2
-0.2
 -0.3
-0.3
 0.9
0.5
 1.8
0.7
 0.8
0.7
 -0.2
-0.8
 1.3
1.0
 0.7
-0.0
 1.9
0.8
27 AT5G45510 Leucine-rich repeat (LRR) family protein 834587 At5g45510 3.7 0.1
 -0.6
 0.8
 8597.1
 -0.1
 1.0
 0.3
 -2.0
 -0.2
 0.2
-0.8
 0.2
-0.3

-1.1
 -0.1




28 AT1G59960 NAD(P)-linked oxidoreductase superfamily protein 842290 At1g59960 3.7 0.7
 0.1
 1.2
 4643.2
 0.9
 0.6
 0.5
 -0.6
 -0.7
 1.1
 -0.3
 0.1
-0.0
 -0.4
-0.7

1.1
-0.6
 0.9
0.2
 3.6
0.3
 -0.1
-0.7
 0.8
-0.2
29 GSTU13 glutathione S-transferase tau 13 839602 At1g27130 3.7 1.5
 0.5
 2.1
 19001.3
 -0.9
 -1.2
 -0.6
 -0.6
 0.5
 0.3
-0.3
 0.9
-1.0








30 AT5G07860 HXXXD-type acyl-transferase family protein 830679 At5g07860 3.7 1.2
 0.7
 1.4
 432.3
 2.1
 2.1
 1.5
 0.5
 0.5
 0.5
-0.3
 1.0
0.7
 1.3
1.1
 0.6
0.3
 0.4
 -0.4
 -0.3
-0.5
 1.1
0.5
 0.5
0.3
 -0.1
 -0.4
-0.7
31 CPK4 calcium-dependent protein kinase 4 826541 At4g09570 3.7 -2.1
 -2.3
 -1.4
 21487.6
 -1.7
 0.4
 -1.6
 -0.7
 -2.5
 0.3
0.0
 0.3
-0.3
 0.4
0.4
 0.5
0.1
 -0.4
-0.4
 -0.1
-1.7
 0.2
-0.2
 1.2
-1.2
 0.6
-0.3
 1.3
1.0
 0.4
-0.5
32 B73 molybdopterin biosynthesis CNX1 protein / molybdenum cofactor biosynthesis enzyme CNX1 (CNX1) 832224 At5g20990 3.7 -1.4
 -1.1
 -1.3
 9017.9
 0.7
 1.0
 -0.1
 -0.1
 -1.5
 -0.5
 -0.5
 -0.7
 0.5
 -0.8
 0.4
 0.1
 -0.2
 -1.4
 -0.3
 -1.1
33 AT1G27030 uncharacterized protein 839592 At1g27030 3.6 0.2
 -0.0
 0.5
 14144.7
 -1.2
 1.8
 0.4
 -0.1
 -0.2
 0.4
-0.0
 -0.1
-0.1








34 SHV3 PLC-like phosphodiesterase family protein 828776 At4g26690 3.5 0.0
 0.2
 -0.2
 8563.8
 0.3
 -1.1
 -0.3
 -2.0
 -0.6
 -0.3
-0.9
 0.4
-0.1
 1.6
0.9
 1.8
0.6
 -0.6
-0.7
 0.2
0.1
 0.8
-0.5
 2.5
1.3
 -0.0
-0.2
 1.0
-0.3
 0.9
0.3
35 MDAR6 monodehydroascorbate reductase 6 842697 At1g63940 3.5 0.8
 0.9
 0.5
 786.2
 1.4
 1.1
 1.7
 1.2
 -0.7
 -0.1
 -1.7
 -0.1
 -0.8
 0.4
 -0.3
 0.3
 0.4
 -1.7
 -1.6
 -1.1
36 AT5G58900 Homeodomain-like transcriptional regulator 836007 At5g58900 3.5 1.2
 1.2
 0.9
 3808.8
 -0.3
 1.3
 1.3
 -1.9
 0.4
 0.5
0.1
 2.1
1.8
 1.9
1.8
 1.4
0.6
 -0.0
-0.1
 -0.4
-0.5
 0.3
0.0
 0.9
0.6
 1.0
-0.4
 0.6
0.5
 1.0
-0.2
37 MIPS3 myo-inositol-1-phosphate synthase 3 830881 At5g10170 3.5 2.7
 2.4
 2.3
 4008.0
 0.8
 1.4
 0.7
 0.7
 0.3
 -0.4
-0.7
 -0.3
-1.5
 0.3
0.3
 1.4
1.1
 1.1
0.5
 0.1
-0.9
 0.9
-0.2
 -0.4
-1.0
 0.6
0.1
 0.2
-0.5
 -0.0
38 ABCG24 P-loop containing nucleoside triphosphate hydrolases superfamily protein 841775 At1g53390 3.5 -0.0
 -0.2
 0.1
 10656.3
 0.3
 0.5
 -0.7
 -0.1
 -0.7
 -0.4
 -0.9
 1.3
1.0
 -0.1
-0.5
 -0.7
 0.0
 0.5
 1.0
 -1.4
 0.3
-0.1
 -0.4
-0.6
39 UGT85A2 UDP-glucosyl transferase 85A2 838843 At1g22360 3.4 1.1
 0.4
 1.5
 7885.6
 1.1
 -1.0
 -1.6
 1.2
 0.6
 0.0
-0.5
 0.1
-0.5
 0.6
0.4
 0.9
0.6
 1.6
1.2
 1.2
0.9
 0.5
-0.1
 1.7
0.7
 -0.0
-0.3
 1.6
1.4
 0.7
0.2
40 GSTF10 glutathione S-transferase PHI 10 817637 At2g30870 3.4 2.0
 1.2
 2.3
 14661.2
 -1.2
 0.5
 -1.2
 -0.3
 1.3
 -0.0
-0.5
 0.1
-0.1
 0.4
0.4
 0.7
0.4
 1.4
0.3
 0.9
0.9
 0.3
0.1
 1.1
0.3
 2.0
0.5
 0.8
-0.1
 -0.0
41 TSA1 tryptophan synthase alpha chain 824629 At3g54640 3.4 1.6
 1.1
 1.6
 16102.4
 0.1
 -0.5
 -1.4
 -0.1
 -0.6
 0.9
-0.7
 0.3
-1.5
 -0.2
-1.0
 0.5
-0.3
 -0.4
-0.5
 0.6
0.5
 1.3
 -0.8
 0.2
 1.1
 0.2
0.1
42 MYB34 myb domain protein 34 836210 At5g60890 3.4 1.9
 1.1
 2.2
 3458.4
 1.1
 -0.4
 -0.1
 1.7
 0.6
 -0.5
 -1.0








43 AT5G12050 rho GTPase-activating protein 831078 At5g12050 3.4 1.1
 1.4
 0.5
 8752.8
 0.5
 0.1
 -0.2
 0.9
 -0.3
 3.1
0.9
 2.0
1.6
 0.7
0.4
 1.1
0.6
 -0.2
-0.3
 -0.6
-0.7
 0.7
-0.1
 0.9
0.8
 1.2
-0.0
 1.3
0.7
44 CYP71B7 cytochrome P450, family 71 subfamily B, polypeptide 7 837868 At1g13110 3.3 1.4
 1.6
 0.8
 8471.3
 0.7
 1.2
 -0.5
 -0.6
 -0.7
 0.9
0.8
 1.1
1.1
 1.4
0.7
 0.6
0.6
 1.0
0.4
 0.8
-0.0
 1.0
-0.1
 2.1
1.6
 0.7
0.6
 0.9
0.2
 -0.4
45 AT1G04040 HAD superfamily, subfamily IIIB acid phosphatase 839325 At1g04040 3.3 1.6
 1.8
 1.0
 452.5
 2.3
 1.5
 1.4
 -1.5
 0.8
 0.7
-0.9
 0.0
-1.2
 -0.1
-0.5
 1.4
1.4
 0.6
 -0.4
 -0.1
-0.5
 2.3
2.1
 0.7
0.1
 1.0
46 AT1G10990 uncharacterized protein 837642 At1g10990 3.3 0.7
 -0.0
 1.1
 12114.7
 0.6
 -1.9
 -1.4
 0.6
 -0.8










47 LBD37 LOB domain-containing protein 37 836878 At5g67420 3.3 0.7
 1.0
 0.2
 867.0
 1.8
 0.4
 2.1
 1.7
 -1.0
 -0.1
-0.4
 2.2
1.0
 1.3
1.2
 0.7
0.4
 0.5
-0.3
 1.2
1.0
 0.5
0.4
 0.7
0.3
 1.0
0.5
 0.8
-0.1
 1.2
0.2
48 CRK29 cysteine-rich RLK (RECEPTOR-like protein kinase) 29 827893 At4g21410 3.3 0.5
 0.2
 0.6
 11183.1
 0.8
 1.2
 -1.3
 -1.7
 0.2
 0.9
0.7
 0.6
0.4
 1.2
0.7
 1.0
0.9
 0.5
0.5
 0.7
0.3
 0.2
0.0
 0.1
0.1
 2.1
2.0
 0.6
0.4
 0.5
0.5
49 MSRB9 methionine sulfoxide reductase B9 828273 At4g21850 3.3 1.4
 1.2
 1.1
 13555.2
 0.6
 0.4
 -1.4
 -1.5
 1.6
 0.1
-0.6
 0.0
-0.1
 0.7
0.3
 1.1
0.3
 0.5
 0.4
 -0.7
 -0.3
 -0.4
 -0.0
-0.6
 -1.2
50 AT4G22310 Uncharacterized protein family (UPF0041) 828326 At4g22310 3.2 0.1
 -0.4
 0.5
 1158.2
 1.8
 1.0
 0.6
 0.3
 -0.2
 -0.1
-0.5
 -0.2
-0.5
 1.5
1.1
 0.2
-0.4
 1.0
 0.6
 0.3
 0.5
 -0.6
 1.1
 0.0
-1.0
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