Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.hor  TRFL1  TRF-like 1 
 ath-u.4  TRFL1  TRF-like 1 
 ath-r.6  TRFL1  TRF-like 1 
 ath-m.9  TRFL1  TRF-like 1 
 ath-m.4.notissue  TRFL1  TRF-like 1 
 ath-m.4.tis  TRFL1  TRF-like 1 
 ath-m.4.str  TRFL1  TRF-like 1 
 ath-m.4.bio  TRFL1  TRF-like 1 
 ath-m.4.lig  TRFL1  TRF-like 1 
 ath-e.1  TRFL1  TRF-like 1 
 ath-u.4  TRFL9  TRF-like 9 
 ath-u.4  TBP1  telomeric DNA binding protein 1 
 gma-u.4  100816121  telomere repeat-binding protein 2 
 gma-u.4  100795471  telomere repeat-binding protein 3 
 gma-u.4  100792533  telomere repeat-binding protein 1 
 ppo-u.4  7458136  telomere repeat-binding protein 3 
 ppo-u.4  7465106  telomere repeat-binding protein 2 
 ppo-u.4  7467553  telomere repeat-binding protein 3 
 mtr-u.4  25489316  telomere repeat-binding protein 2 
 mtr-u.4  11436475  telomere repeat-binding protein 4 
 mtr-u.4  11417600  telomere repeat-binding protein 5 
 sly-u.4  101255102  telomere repeat-binding protein 5-like 
 sly-u.4  101246932  telomere repeat-binding protein 5 
 sly-u.4  101255981  telomere repeat-binding protein 3 
 osa-u.4  4332403  telomere repeat-binding protein 5 

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Top 50 coexpressed genes to TRFL1 (ath-m.4.hor coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath52   Galactose metabolism  1 57 -
 ath900   Terpenoid backbone biosynthesis  2 61 -
 ath53   Ascorbate and aldarate metabolism  1 63 -
 ath561   Glycerolipid metabolism  2 66 -
 ath10   Glycolysis / Gluconeogenesis  1 119 -

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ath:TRFL1 (TRF-like 1) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Condition specific* Reference

ath-m.4.hor
for
TRFL1


ath-u.4
for
TRFL1


ath-r.6
for
TRFL1


ath-m.9
for
TRFL1


ath-m.4.notissue
for
TRFL1


ath-m.4.tis
for
TRFL1


ath-m.4.str
for
TRFL1


ath-m.4.bio
for
TRFL1


ath-m.4.lig
for
TRFL1


ath-e.1
for
TRFL1


ath-u.4
for
TRFL9


ath-u.4
for
TBP1


gma-u.4
for
100816121


gma-u.4
for
100795471


gma-u.4
for
100792533


ppo-u.4
for
7458136


ppo-u.4
for
7465106


ppo-u.4
for
7467553


mtr-u.4
for
25489316


mtr-u.4
for
11436475


mtr-u.4
for
11417600


sly-u.4
for
101255102


sly-u.4
for
101246932


sly-u.4
for
101255981


osa-u.4
for
4332403

1 FC2 LAMMER-type protein kinase AFC2 828576 At4g24740 5.7 3.4
2.8
3.1
478.3
1.4
-0.5
0.7
0.3
0.4
3.6
2.2
1.7
-0.1
3.2
2.9
2.0
1.8
1.0
1.0
2.2
1.4
2.6
1.7
1.5
1.2
2.4
1.5
2.6
2.1
1.3
0.7
2.1
1.0
1.5
1.1
1.6
0.1
3.0
0.8
2 AT3G11230 Yippee family putative zinc-binding protein 820293 At3g11230 5.0 2.3
1.2
2.8
195.8
1.5
1.1
1.6
1.0
-0.4
2.2
1.4













3 ZFN1 zinc finger protein 1 821230 At3g02830 4.9 2.8
3.1
1.8
792.6
0.2
1.4
0.8
0.7
2.4
2.1
1.9
1.3
0.4
0.4
0.3
4.3
3.9
0.3
0.1
2.3
0.7
-0.0
-0.2
2.4
0.4
2.1
3.8
-2.3
2.8
0.8
-2.1
1.5
0.6
4 AT4G34630 prostatic spermine-binding-like protein 829615 At4g34630 4.9 3.4
3.1
2.7
494.7
1.5
2.8
1.4
-0.7
2.9
3.6
1.7
0.4
-0.2
3.1
2.0
0.5
0.4
0.2
-0.5
2.7
-0.2
0.9
-0.5
0.9
1.8
-1.5
0.4
-0.9
1.3

5 AAE7 acyl-activating enzyme 7 820946 At3g16910 4.9 2.2
2.2
1.7
54.4
1.5
1.2
2.7
-0.1
3.4
2.0
-0.4
0.8
0.1
1.2
0.8
0.4
-0.7
0.8
1.1
1.5
1.4
-0.5
2.5
1.1
-1.7
-2.1
1.4
-0.0
2.4
-0.7
0.6
-0.7
0.9
-1.6
6 FBW2 F-BOX WITH WD-40 2 826476 At4g08980 4.7 2.3
2.5
1.5
119.4
0.7
1.3
3.2
-0.3
3.1
2.0
0.6
0.9
0.3
0.8
-0.3
0.9
0.4
-1.1
-0.9
-1.4
-0.3
-1.3
2.0
0.6
1.0
-0.4
1.2
-0.2
-1.4
0.6
-0.7
7 AT1G54460 TPX2 (targeting protein for Xklp2) protein family 841888 At1g54460 4.4 1.4
1.2
1.2
450.8
-1.6
1.2
1.0
0.6
1.8
2.6
0.7
2.8
0.6
3.1
2.5
1.7
0.4
0.7
0.7
-0.1
-0.3
0.3
-0.1
-0.3
-0.5
1.6
-0.1
1.5
1.1
0.6
0.3
0.6
0.6
0.3
0.0
2.5
1.5
1.7
0.3
8 IDD11 indeterminate(ID)-domain 11 820593 At3g13810 4.3 2.5
1.5
2.8
7.2
1.6
2.2
2.5
1.6
1.9
0.9
0.9













9 AT2G02960 RING/FYVE/PHD zinc finger superfamily protein 814825 At2g02960 4.2 2.8
1.9
2.9
1232.1
-0.8
0.3
-0.3
0.3
1.0















10 AT5G56790 Protein kinase superfamily protein 835781 At5g56790 4.2 1.9
1.5
1.7
1954.3
-0.9
1.4
1.3
-0.3
1.0
1.3
0.6
1.4
-0.2
1.3
1.1
-0.1
-0.1
0.1
-0.0
0.2
-0.1
2.0
1.4
1.2
1.1
-0.5
-0.7
3.1
0.5
-0.1
-0.5
0.8
0.4
1.1
1.1
1.2
0.4
-0.1
-1.2
11 SPS1 solanesyl diphosphate synthase 1 844187 At1g78510 4.2 0.9
0.9
0.6
2447.1
2.5
0.2
1.4
-1.7
1.0
0.3
-0.3
0.1
-0.7
0.2
-0.0
2.0
1.1
-0.0
-0.9
1.8
-1.4
1.4
0.6
0.4
-1.4
0.4
-0.0
0.4
1.4
0.6
12 AT5G49990 Xanthine/uracil permease family protein 835063 At5g49990 4.2 -0.1
-0.1
-0.1
297.2
0.7
1.2
3.9
0.8
1.1
-0.4
-0.7
1.7
1.1
0.6
-0.0
1.0
0.9
0.9
0.8
0.8
0.7
0.6
0.3
0.8
0.2
0.7
-0.4
3.7
0.1
0.6
-0.7
3.1
0.7
1.7
1.1
-0.1
-0.6
0.6
0.1
13 AT3G59300 Pentatricopeptide repeat (PPR) superfamily protein 825099 At3g59300 4.2 4.4
4.0
3.7
17.9
1.2
4.0
1.1
1.3
2.8
2.6
1.0
-0.4
0.7
0.3
0.4
-0.8
-1.2
-2.8
0.3
-0.3
-0.7
1.9
0.3
0.3
2.5
-0.3
2.8
14 SPD1 P-loop containing nucleoside triphosphate hydrolases superfamily protein 820206 At3g10420 4.1 4.7
4.2
3.9
101.8
3.6
2.0
0.3
0.1
3.3
2.0
2.8
2.5
1.8
3.2
1.3
0.3
0.0
2.6
1.8
0.9
0.9
3.2
2.8
3.0
1.9
-1.3
0.9
-0.3
0.8
1.5
15 UMAMIT41 nodulin MtN21 /EamA-like transporter family protein 822429 At3g28050 4.1 2.5
2.3
1.9
143.8
1.3
1.5
2.1
1.4
0.7
1.3
-0.0
1.1
-0.0
0.4
-0.2
-0.9
-1.1
-0.9
1.1
0.1
-0.8
4.4
-0.7
1.3
0.3
-0.9

16 AT4G13100 RING/U-box superfamily protein 826924 At4g13100 4.1 3.5
3.5
2.5
547.1
-0.1
3.0
2.7
1.4
2.1
2.2
1.7
0.9
0.4
0.2
-0.3
1.7
0.8
0.1
-0.3
1.3
-0.1
-0.0
-0.8
2.3
0.5
-0.2
-0.4
1.1
-0.3
-0.5
-1.1
0.4
-0.4
-0.1
-0.5
1.9
0.5
0.1
-0.8
17 UGP3 UDP-glucose pyrophosphorylase 3 824770 At3g56040 4.0 4.2
3.1
4.2
236.2
1.0
2.9
0.4
1.2
2.3
0.5
2.1
1.8
0.9
0.6
-0.2
0.1
-0.4
-0.6
-0.2
0.1
0.9
1.9
-0.2
1.5
1.2
1.9
2.0
18 AT3G62190 Chaperone DnaJ-domain superfamily protein 825392 At3g62190 4.0 0.6
0.5
0.6
2142.9
0.3
-0.7
1.4
-0.1
0.7
-0.7
-1.7
0.6
0.2
-0.7



1.2
1.6
-0.9
1.2
-1.2
0.5
-0.2
19 Cand2 Protein of unknown function, transmembrane-40 819662 At3g05010 3.9 1.6
1.5
1.2
127.0
1.7
1.6
1.4
0.4
-0.2
1.5
0.2
-0.0
-1.3
0.8
0.8
2.1
0.9
-0.6
-0.9
1.1
0.7
2.3
0.9
2.3
1.2
0.1
2.7
-1.5
-0.5
0.0
1.3
-0.9
20 CYP71B28 cytochrome P450, family 71, subfamily B, polypeptide 28 837866 At1g13090 3.9 3.4
3.9
2.0
99.5
2.6
2.2
2.2
0.1
2.9
1.3
0.9
2.1
1.5
0.7
0.5
1.5
1.4
1.6
0.7
0.0
-0.2
1.0
0.7
0.5
0.3
1.7
1.6
2.1
2.1
1.1
0.9
1.6
0.3
0.5
0.2
0.7
0.5
-0.8
21 KUP9 K+ uptake permease 9 827740 At4g19960 3.9 2.4
2.4
1.7
2934.5
1.4
-0.0
0.8
-1.1
1.9
0.4
-1.0
1.6
1.1
2.6
1.4
0.8
0.7
0.6
0.3
2.3
0.1
0.8
0.7
1.3
1.1
-0.0
-0.6
1.9
1.9
0.1
0.1
1.2
1.2
1.5
1.4
1.9
1.3
0.9
0.9
22 DGD1 UDP-Glycosyltransferase superfamily protein 820339 At3g11670 3.9 2.9
2.6
2.4
1743.9
2.7
0.2
0.5
-0.1
4.0
0.8
1.4
0.3
-1.2
3.0
2.2
-0.5
-0.8
2.3
0.7
1.2
-1.5
3.4
3.2
2.3
1.0
1.2
0.0
0.4
0.3
2.4
0.7
1.5
1.0
1.5
1.1
2.6
2.4
23 AT5G62610 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 836382 At5g62610 3.8 3.3
2.6
3.2
14.1
1.1
1.3
3.0
-0.3
0.9
2.1
0.5
1.8
0.4
1.1
-0.0
0.4
0.4
0.5
0.4
-0.5
-1.0
-0.1
-0.4
0.3
-0.6
0.2
-0.1
-0.4
-0.8
-0.2
-0.9
0.4
-0.0
-1.1
-1.2
1.2
0.3
0.2
-0.5
24 AT3G03790 ankyrin repeat family protein / regulator of chromosome condensation (RCC1) family protein 821145 At3g03790 3.8 6.9
5.5
6.4
5.5
1.7
5.3
1.2
2.2
3.4
2.6
3.0
2.7
2.5
3.8
3.5
0.2
-0.2
2.5
0.4
1.6
2.2
3.7
-0.7
2.0
1.0
1.2
3.3
25 MAG1 Calcineurin-like metallo-phosphoesterase superfamily protein 823935 At3g47810 3.8 1.6
0.5
2.1
808.5
0.6
1.0
1.8
0.8
0.1
2.3
0.5
2.3
1.2
2.4
1.4
-0.6
-0.7
0.1
0.1
0.6
0.5
1.4
-0.6
0.8
-0.2
2.6
-0.3
-1.3
-3.0
0.2
-1.1
0.6
1.0
26 AT2G38740 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 818456 At2g38740 3.8 0.9
1.2
0.4
984.6
0.2
2.0
-0.7
0.8
2.7
0.1
1.0
1.9
1.7
1.3
1.0
1.4
0.7
0.9
0.6
1.0
0.3
1.8
0.2
-0.4
-1.3
-0.2
-0.1
-0.6
0.6
-1.8
-0.1
-0.3
1.0
-0.7
27 MEE13 myosin heavy chain-like protein 815956 At2g14680 3.8 3.5
3.2
2.8
124.4
0.6
1.9
1.4
1.4
-0.1
3.2
2.2
3.1
2.0
1.4
0.7
-1.1
1.4
1.0
-0.2
-0.3
1.7
1.4
1.0
-0.7
1.6
1.1
0.4
28 RHD1 NAD(P)-binding Rossmann-fold superfamily protein 842752 At1g64440 3.7 0.6
0.5
0.5
911.6
-0.5
-0.2
1.7
-0.2
1.7
3.9
0.0
2.3
1.9
-0.2
-0.3
1.0
0.2
0.5
-0.4
1.8
1.3
2.3
1.7
1.5
1.4
2.0
1.6
1.9
0.7
0.7
0.5
-0.1
-0.4
0.5
-0.7
1.2
-0.4
2.6
1.3
29 ABCB26 transporter associated with antigen processing protein 1 843398 At1g70610 3.7 1.6
0.9
1.9
3141.4
1.9
0.6
-0.6
0.9
1.6
-0.3
1.4
2.6
1.8
3.5
2.1
1.6
1.1
0.9
0.4
1.3
0.7
-1.2
0.4
-0.2
0.4
0.3
1.2
0.0
-0.1
1.6
30 AT3G26440 transmembrane protein, putative (DUF707) 822248 At3g26440 3.7 0.6
0.9
0.2
3819.8
0.4
0.8
0.0
-0.6
1.6
0.8
1.7













31 AT5G02240 NAD(P)-binding Rossmann-fold superfamily protein 830851 At5g02240 3.6 1.6
1.1
1.6
2396.2
0.9
0.6
1.4
0.1
0.1
1.5
-0.6
-0.2
-0.9
0.1
-0.8
-0.7
-1.5
-0.6
-2.0
1.3
-0.0
1.8
1.0
-1.0
0.9
-1.4
0.7
-1.5
-0.1
-1.3
1.2
0.4
-0.5
32 AT3G12350 F-box family protein 820413 At3g12350 3.6 3.7
3.3
3.1
958.1
0.7
0.9
-0.9
-0.9
1.5
3.2
2.0
1.9
0.7
2.2
-0.2
0.7
0.7
0.8
0.5
1.3
2.8
4.2
-1.8
-0.0
-0.9
0.1
2.6
33 CIPK12 CBL-interacting protein kinase 12 827604 At4g18700 3.6 0.2
0.5
-0.2
4470.7
0.0
-0.3
0.5
-1.5
-1.3
1.7
1.0
2.3
1.7
1.7
0.6
2.5
0.9
0.7
0.6
3.7
3.5
1.2
-0.4
3.5
1.7
1.5
1.3
0.6
-1.3
1.0
-0.1
2.8
-0.3
-0.9
0.3
-1.1
34 AT1G70900 uncharacterized protein 843429 At1g70900 3.6 4.4
4.1
3.5
305.4
3.6
1.0
1.4
1.6
2.2
0.3
-0.3
0.9
0.7
1.4
1.9
-0.1
1.3
0.4
0.5
-0.1
2.6
-0.1
1.8
0.9
-0.4
0.9
-0.3
-0.6
1.7
0.9
35 ECA2 ER-type Ca2+-ATPase 2 827984 At4g00900 3.6 -0.7
-1.6
0.5
5015.3
-0.3
0.2
0.4
-0.7
0.4
0.4
3.5
0.6
0.5
0.9
0.2
0.7
0.1
1.2
-0.4
0.8
1.1
1.3
0.2
0.2
-1.2
-0.4

36 SDIR1 RING/U-box superfamily protein 824718 At3g55530 3.6 0.8
0.8
0.5
1108.7
-0.2
0.5
2.2
0.3
2.2
1.2
-0.2
1.1
0.4
1.6
0.8
0.3
-0.4
0.0
-0.5
0.8
-1.4
1.2
0.8
2.0
0.6
-1.4



-0.2
37 VTC4 Inositol monophosphatase family protein 821206 At3g02870 3.5 1.0
0.5
1.2
10060.4
-0.7
1.2
-1.1
1.5
-0.0
-1.0
0.8
0.6
0.5
1.1
1.0
0.8
-0.5
0.4
-0.3
-0.7
-2.2
-0.3
-0.4
0.4
-0.0
0.2
0.6
0.0
-1.1
-1.1
0.1
-0.1
1.8
38 AT4G34600 uncharacterized protein 829612 At4g34600 3.5 -0.4
-0.5
-0.3
5643.5
-0.8
0.3
0.6
-0.4
-1.2
-0.6
-0.4
-0.4
-0.4
-0.5
-0.4
-0.3
-0.7
-0.0
0.7
-1.4
0.5
1.2
0.2
-0.1
-0.8
39 AT3G59950 Peptidase family C54 protein 825165 At3g59950 3.5 2.7
1.9
2.8
151.3
1.8
2.4
1.6
0.1
2.7
2.8
1.4
1.4
1.3
1.0
0.0
1.9
0.5
1.1
-0.5
2.8
2.3
1.8
1.5
2.9
1.1
1.6
4.0
-0.6
0.5
0.5
2.4
0.7
-1.6
40 AT3G05730 defensin-like protein 819742 At3g05730 3.5 -0.1
-0.4
0.3
10453.1
0.3
-0.4
-0.8
0.1
-0.1
-0.2
-1.0
-0.2
-0.5













41 AT5G19430 RING/U-box superfamily protein 832063 At5g19430 3.5 4.4
4.3
3.3
106.5
1.4
1.1
1.7
1.1
2.9
1.6
1.2
0.6
-0.7
1.0
-0.3
2.5
1.6
-0.6
-1.5
2.9
1.3
2.5
1.1
2.1
1.4
2.3
3.5
-1.1
2.8
-0.3
0.3
-0.2
1.2
0.5
2.7
42 ATSPS4F Sucrose-phosphate synthase family protein 826603 At4g10120 3.5 3.1
2.3
3.2
42.7
2.3
3.1
2.2
0.8
2.2
0.7
0.6
1.6
0.7
1.0
0.8
1.3
1.0
1.0
0.8
-0.1
-0.4
-0.6
-0.7
1.5
0.1
0.0
-0.5
0.1
-1.6
0.3
-1.4
1.5
1.2
-0.5
-0.9
-0.5
-0.8
1.5
0.7
43 cPT4 Undecaprenyl pyrophosphate synthetase family protein 835991 At5g58770 3.5 0.5
0.8
0.1
5543.2
1.2
-0.5
0.9
-1.3
-0.6
-0.2
-1.2
1.1
0.7
-0.1
-0.7
0.8
0.2
0.2
0.4
0.4
0.5
-0.9
-0.2
-0.3
-1.4
-0.3
-0.9
1.4
0.9
-0.1
44 AT5G25630 Tetratricopeptide repeat (TPR)-like superfamily protein 832639 At5g25630 3.5 5.6
5.3
4.4
37.1
2.2
3.1
2.4
1.1
2.4
3.2
1.7
1.5
1.0
0.6
-1.9
1.7
1.7
-0.5
-0.7
1.5
0.4
-0.6
-1.9
1.2
1.0
1.2
0.1
0.4
-1.2
0.2
0.1
1.0
0.4
0.3
0.0
1.4
-1.0
1.4
45 AT5G16520 uncharacterized protein 831514 At5g16520 3.5 0.9
0.3
1.3
686.3
1.7
1.1
1.1
-0.8
0.2
0.7
1.2
1.5
0.2
1.7
1.3
1.8
0.8
1.2
1.0
-0.2
0.5
2.2
-0.9
-0.8
-1.2
0.8
0.9
46 AT1G05710 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 837078 At1g05710 3.5 -0.2
0.0
-0.4
3442.1
-1.1
-0.1
0.5
-1.1
0.1
0.2
-0.0
-0.1
-0.3
-0.8
-1.2
0.4
-0.3
-0.9
-1.1
-1.3
-1.7
1.1
-0.6
-0.4
-2.9
-1.5
0.5
-0.4
-1.1
0.2
0.4
0.1
-1.4
47 AT1G23140 Calcium-dependent lipid-binding (CaLB domain) family protein 838922 At1g23140 3.4 0.7
0.6
0.5
765.3
0.3
0.1
0.9
-0.1
-0.8
1.1
0.2
0.7
0.6
0.3
0.2
2.0
1.3
0.5
0.3
1.8
-1.8
1.5
-0.4
2.1
-0.4
2.1
1.1
0.8
0.0
0.2
0.0
2.1
0.6
0.7
0.5
1.2
0.7
1.6
-1.4
48 CKB4 casein kinase II beta subunit 4 819076 At2g44680 3.4 1.0
1.6
0.1
2251.2
0.6
-0.1
2.5
-1.1
1.3
3.0
1.1
0.7
0.5
2.2
2.0
0.5
0.3
1.6
1.4
0.2
-0.0
1.4
0.6
0.8
0.1
0.8
-0.9
1.8
-0.1
1.0
0.3
1.7
0.6
2.0
-0.4
1.2
0.7
-0.5
-1.4
49 PHO1;H1 EXS (ERD1/XPR1/SYG1) family protein 843205 At1g68740 3.4 0.8
0.4
1.0
2616.9
0.2
0.3
-0.1
1.1
-0.2
-0.9
0.5
0.2
0.1
0.2
0.1
0.1
0.1
-1.1
-2.1
-0.3
0.0
1.3
-0.0
-0.1
-0.0
-1.3
-1.0
50 AT1G22850 SNARE associated Golgi protein family 838890 At1g22850 3.4 0.6
0.7
0.3
5743.1
1.2
-0.3
-0.6
0.1
1.5
-2.5
0.3
-0.2
0.1
-1.7
1.7
1.6
0.3
-1.3
2.3
1.4
1.2
1.1
-0.7
-0.9
-0.9
-0.7
-0.3
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