Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.hor   AT5G13760   Plasma-membrane choline transporter family protein 
 ath-u.4   AT5G13760   Plasma-membrane choline transporter family protein 
 ath-r.6   AT5G13760   Plasma-membrane choline transporter family protein 
 ath-m.9   AT5G13760   Plasma-membrane choline transporter family protein 
 ath-m.4.notissue   AT5G13760   Plasma-membrane choline transporter family protein 
 ath-m.4.tis   AT5G13760   Plasma-membrane choline transporter family protein 
 ath-m.4.str   AT5G13760   Plasma-membrane choline transporter family protein 
 ath-m.4.bio   AT5G13760   Plasma-membrane choline transporter family protein 
 ath-m.4.lig   AT5G13760   Plasma-membrane choline transporter family protein 
 ath-e.1   AT5G13760   Plasma-membrane choline transporter family protein 
 gma-u.4   100801142   protein PNS1 
 ppo-u.4   7467349   protein PNS1 
 ppo-u.4   7480062   protein PNS1 
 mtr-u.4   11410424   protein PNS1 
 sly-u.4   101259077   protein PNS1 
 osa-u.4   4344145   CTL-like protein DDB_G0274487 

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Top 50 coexpressed genes to AT5G13760 (ath-m.4.hor coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath52   Galactose metabolism  1 51 2.13
 ath565   Ether lipid metabolism  2 26 -
 ath53   Ascorbate and aldarate metabolism  1 63 -
 ath564   Glycerophospholipid metabolism  3 99 -
 ath190   Oxidative phosphorylation  1 170 -

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ath:AT5G13760 (Plasma-membrane choline transporter family protein) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition specific* Reference

ath-m.4.hor
for
AT5G13760
ath-u.4
for
AT5G13760
ath-r.6
for
AT5G13760
ath-m.9
for
AT5G13760
ath-m.4.notissue
for
AT5G13760
ath-m.4.tis
for
AT5G13760
ath-m.4.str
for
AT5G13760
ath-m.4.bio
for
AT5G13760
ath-m.4.lig
for
AT5G13760
ath-e.1
for
AT5G13760
gma-u.4
for
100801142
ppo-u.4
for
7467349
ppo-u.4
for
7480062
mtr-u.4
for
11410424
sly-u.4
for
101259077
osa-u.4
for
4344145
1 AT1G17340 Phosphoinositide phosphatase family protein 838305 At1g17340 4.8 3.0
 2.1
 3.2
 11.8
 0.8
 4.1
 2.7
 0.8
 1.7





2 ADT5 arogenate dehydratase 5 832326 At5g22630 4.8 1.0
 1.1
 0.6
 1085.3
 0.1
 0.6
 2.2
 -2.0
 0.6
 0.8
0.6
 0.7
0.3
 1.9
1.8
 -0.2
-0.8
 0.2
-0.4
 1.3
0.5
3 ESL1 ERD (early response to dehydration) six-like 1 837413 At1g08920 4.8 2.7
 1.7
 3.0
 521.6
 0.9
 0.9
 3.6
 -1.4
 0.8
0.1
 0.4


4 AT5G49900 Beta-glucosidase, GBA2 type family protein 835053 At5g49900 4.5 0.4
 0.3
 0.5
 14269.8
 -0.5
 -1.2
 -0.5
 0.3
 -0.8
0.7
0.6
 1.2
-0.3
 -1.3
 1.3
-0.9
 -0.5
5 SIP2 seed imbibition 2 824919 At3g57520 4.5 3.9
 3.1
 3.5
 130.3
 1.8
 1.8
 3.8
 0.1
 1.3
 -0.7
 2.5
-0.3
 0.1
0.0
 0.6
-0.9
 1.6
 1.2
-0.5
6 AT4G11800 Calcineurin-like metallo-phosphoesterase superfamily protein 826786 At4g11800 4.4 1.9
 2.2
 1.0
 2097.9
 1.1
 0.2
 0.2
 -1.3
 2.3
 1.7
0.9
 2.3
 -0.4
 3.0
 1.9
0.8
 1.6
0.4
7 UMAMIT22 nodulin MtN21 /EamA-like transporter family protein 840949 At1g43650 4.2 0.3
 0.1
 0.5
 390.0
 0.0
 1.7
 -0.0
 1.5
 -0.1
0.9
-1.3
 1.0
0.7
 0.8

8 AT5G49280 hydroxyproline-rich glycoprotein family protein 834988 At5g49280 4.0 1.2
 0.7
 1.4
 526.9
 0.4
 0.3
 3.1
 0.4
 0.3



-0.7
9 ASAT1 acyl-CoA sterol acyl transferase 1 824360 At3g51970 4.0 1.3
 0.9
 1.3
 227.3
 0.6
 2.3
 1.9
 0.5
 0.7
 0.4
-0.4
 1.1
0.9
 1.0
0.4
 0.6
0.2
 0.4
0.2
 0.4
-0.3
10 AT5G56980 cotton fiber protein 835800 At5g56980 4.0 0.6
 1.0
 0.1
 1001.8
 0.7
 1.6
 1.5
 -0.5
 0.2
 1.4
0.4
 2.9
-0.0
 1.3
0.8
 1.9
0.5
 0.7
-0.3
 1.3
1.2
11 AT4G30490 AFG1-like ATPase family protein 829172 At4g30490 3.9 1.6
 1.8
 1.0
 577.2
 0.5
 2.6
 1.6
 0.7
 0.4
 -1.5
-2.2
 1.6
 -1.1
 -1.3
 1.1
 -0.2
12 MES5 methyl esterase 5 830894 At5g10300 3.9 2.3
 2.4
 1.6
 357.6
 1.6
 1.4
 3.1
 2.3
 1.7
 0.4
0.2
 0.9
0.9
 0.6
0.2
 0.7
-0.4
 0.9
-0.5
 0.2
-0.7
13 ABCG29 pleiotropic drug resistance 1 820881 At3g16340 3.9 -0.3
 0.0
 -0.5
 1487.0
 -0.6
 0.2
 2.6
 -1.1
 -1.4
 0.1
0.0
 0.2
 -0.8
 -0.4
-0.7
 2.1
 0.6
0.3
14 AGT3 alanine:glyoxylate aminotransferase 3 818421 At2g38400 3.9 2.2
 2.7
 1.2
 45.9
 0.0
 2.6
 4.7
 2.1
 1.2
 1.2
0.3
 0.9
0.6
 0.3
0.2
 -0.2
-0.6
 1.5
 -0.2
-0.3
15 SYP21 syntaxin of plants 21 831546 At5g16830 3.8 1.0
 1.2
 0.6
 124.9
 0.1
 1.4
 2.4
 -0.6
 -1.0





16 NDL1 N-MYC downregulated-like 1 835777 At5g56750 3.7 4.0
 3.6
 3.3
 7.5
 -0.1
 2.4
 4.4
 1.7
 0.1
 3.6
0.7
 -0.0
-0.4
 -0.2
-0.4
 3.0
0.1
 0.1
-0.3
 2.5
2.1
17 RKP uncharacterized protein 816737 At2g22010 3.7 2.9
 3.1
 1.9
 548.4
 2.6
 0.4
 2.3
 -0.3
 1.7
 2.7
2.7
 2.0
0.2
 -0.6
-1.4
 1.8
 0.9
 -0.1
18 AT2G32150 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 817774 At2g32150 3.6 3.6
 3.5
 2.8
 4.2
 1.2
 4.5
 3.0
 3.2
 1.9
 1.1
-0.1
 2.3
1.0
 0.2
0.1
 -1.3
 1.5
 0.3
19 AT4G28300 formin-like protein (DUF1421) 828945 At4g28300 3.6 3.0
 3.4
 1.9
 9.5
 1.1
 3.0
 3.6
 2.2
 4.0
 1.7
1.4
 1.0
0.5
 0.4
0.1
 0.0
-0.5
 1.3
0.8
 0.5
20 AT1G32690 DUF740 family protein 840163 At1g32690 3.6 1.6
 1.0
 1.7
 24.6
 0.4
 4.0
 1.6
 -0.7
 2.9
 1.2
0.8
 2.0
1.4
 0.0
-1.5
 0.5
 1.6
1.0
 1.5
-0.2
21 SIP4 SOS3-interacting protein 4 817586 At2g30360 3.6

0.4
 454.7
 -0.2
 1.1
 3.0
 2.0
2.1
1.8
 1.6
0.7
 -0.5
-0.7
 0.7
 1.4
1.0
22 AT1G63010 Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein 842604 At1g63010 3.5 1.8
 2.2
 1.0
 2049.7
 0.6
 0.8
 1.6
 -2.8
 1.3
 3.7
2.4
 2.0
0.5
 -0.0
-0.4
 1.4
-0.2
 1.7
1.3
 0.9
-0.3
23 PUT4 Amino acid permease family protein 820565 At3g13620 3.4 1.3
 1.1
 1.2
 1776.5
 0.2
 1.0
 2.0
 -1.5
 2.2
 0.9
0.6
 0.5
0.0
 -0.3
-0.8
 2.3
1.2
 1.1
0.5
 0.8
24 SPPL4 SIGNAL PEPTIDE PEPTIDASE-LIKE 4 839499 At1g01650 3.4 2.6
 2.2
 2.2
 1193.2
 2.6
 -0.3
 2.3
 -1.0
 1.8
 3.2
2.2
 1.2
1.0
 0.5
0.1
 0.3
-0.7
 1.1
0.8
 0.7
-1.0
25 AT1G69360 T-box transcription factor, putative (DUF863) 843268 At1g69360 3.4 1.2
 1.3
 0.7
 163.3
 0.2
 1.5
 3.1
 1.5
 2.5
 1.7
1.5
 0.9
0.6
 1.4
-0.4
 1.7
0.2
 1.4
1.0
26 ANT1 aromatic and neutral transporter 1 820363 At3g11900 3.4 2.2
 1.4
 2.4
 657.7
 -0.2
 1.7
 1.4
 -2.0
 2.6
 2.4
0.8
 -2.1
 -0.1
 1.4
0.5
-0.3
27 VTC5 GDP-L-galactose phosphorylase VITAMIN C DEFECTIVE 5 (VTC5) 835603 At5g55120 3.4 2.0
 1.7
 1.8
 223.7
 0.7
 1.5
 2.0
 -1.9
 2.0
 1.3
0.7
 0.5
0.2
 -0.1
-0.6
 2.1
1.0
 0.7
0.6
 0.5
28 AT3G11420 beta-1,3-N-acetylglucosaminyltransferase lunatic protein, putative (DUF604) 820315 At3g11420 3.4 0.8
 0.6
 0.8
 300.6
 0.3
 0.7
 2.6
 2.3
 -1.3
 -0.5
 1.9
0.5
 0.3
-0.5
 -0.2
-0.4
2.2
1.1
29 PLDDELTA phospholipase D delta 829733 At4g35790 3.4 0.7
 0.8
 0.4
 5746.7
 0.4
 -0.6
 1.1
 3.4
 -0.7
 1.3
1.0
 0.9
0.1
 1.7
-0.4
 0.4
-0.9
 1.6
-0.0
 0.7
-1.0
30 PNC2 peroxisomal adenine nucleotide carrier 2 832812 At5g27520 3.4 1.0
 1.3
 0.4
 1312.1
 0.8
 -0.2
 2.6
 -0.3
 2.0
 1.6
1.6
 1.2
-0.3
 0.9
0.0
 0.7
-0.6
 0.8
-0.1
 0.1
31 EBF1 EIN3-binding F box protein 1 817087 At2g25490 3.4 3.2
 1.7
 3.7
 77.3
 1.4
 3.1
 1.8
 1.7
 2.9
 2.3
2.2
 1.7
1.6
 1.0
1.0
 1.0
-0.3
 0.5
0.1
 0.3
0.2
32 PIRL1 plant intracellular ras group-related LRR 1 830470 At5g05850 3.4 3.3
 2.7
 3.0
 377.4
 -0.1
 1.9
 1.1
 1.4
 1.9
 3.1
 -0.3
-0.4
 1.8
-0.3
 -0.2
-1.8
 1.9
 0.1
-0.5
33 VHA-E3 vacuolar H+-ATPase subunit E isoform 3 842725 At1g64200 3.3 1.9
 1.6
 1.7
 108.0
 -0.9
 2.6
 2.2
 -0.5
 1.1
 0.7
0.6
 0.5
-0.6
 0.1
-0.3
 -0.1
-0.3
 0.4
0.1
 -0.2
-1.7
34 GDPD2 PLC-like phosphodiesterases superfamily protein 834110 At5g41080 3.3 3.7
 2.9
 3.4
 31.3
 0.2
 3.2
 2.4
 4.0
 0.8
 3.0
1.6
 3.2
1.2
 1.2
1.1
 1.3
 0.3
 0.8
35 AT2G23450 Protein kinase superfamily protein 816877 At2g23450 3.3 1.2
 1.6
 0.5
 290.3
 1.6
 1.3
 2.6
 1.0
 1.2
 1.0
0.6
 1.6
1.6
 0.6
0.5
 -0.6
-1.3
 1.2
0.1
 -0.6
36 AT3G57070 Glutaredoxin family protein 824874 At3g57070 3.3 -0.1
 -0.2
 0.1
 843.0
 -0.2
 2.0
 0.9
 -0.1
 -0.5
 0.6
0.3
 -1.0
-1.2
 0.4
-0.4
 -0.7
 -0.7
37 AT4G37220 Cold acclimation protein WCOR413 family 829876 At4g37220 3.3 1.8
 1.5
 1.6
 574.5
 -0.0
 1.8
 0.2
 1.6
 0.0
 -0.7
-1.1
 0.2
-0.4
 0.3
-0.9
 1.1
-1.7
 1.3
0.6
 0.2
38 PAP22 purple acid phosphatase 22 824448 At3g52820 3.3 1.7
 1.4
 1.6
 751.3
 0.8
 0.7
 1.6
 1.2
 0.7
 0.5
-0.0
 1.1
 -0.0
 0.4
-0.8
 0.8
 1.0
0.9
39 LPLAT1 MBOAT (membrane bound O-acyl transferase) family protein 837820 At1g12640 3.3 2.9
 2.2
 2.8
 99.3
 0.8
 3.0
 2.0
 1.2
 0.6
 0.9
0.8
 1.2
-1.9
 -0.5
-1.3
 0.4
 0.7
-0.3
 -0.1
40 AT3G55640 Mitochondrial substrate carrier family protein 824730 At3g55640 3.3 2.7
 3.0
 1.7
 1299.2
 2.7
 0.3
 3.1
 -0.2
 2.0
 1.3
1.3
 1.1
-0.0
 0.5
-0.1
 1.2
0.4
 -1.6
 0.1
-0.0
41 AT1G61890 MATE efflux family protein 842485 At1g61890 3.3 1.7
 1.5
 1.5
 502.0
 1.2
 1.1
 2.2
 0.3
 0.2





42 AT1G76580 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein 843991 At1g76580 3.3 1.0
 0.9
 0.9
 6945.0
 2.7
 -1.2
 1.2
 1.1
 -0.7
 3.5
2.4
 1.9
0.3
 -0.2
-0.3
 -0.4
0.5
43 AT2G39420 alpha/beta-Hydrolases superfamily protein 818527 At2g39420 3.3 1.2
 0.6
 1.4
 1138.9
 -0.1
 1.1
 1.6
 -0.1
 1.9
 0.6
0.3
 1.1
-1.8
 -0.1
-0.6
 -0.9
 0.5
44 ERD2 ER lumen protein retaining receptor family protein 839807 At1g29330 3.3 2.5
 2.0
 2.4
 205.2
 0.4
 0.8
 2.7
 2.6
 3.2
 -1.1
-1.8
 -0.4
 -0.8
 0.8
 1.4
 0.1
45 RAP2.6 uncharacterized protein 840915 At1g43160 3.3 1.8
 1.7
 1.4
 260.4
 0.8
 1.3
 2.6
 -1.5
 1.2
 1.4
1.0
 1.5
1.4
 0.4
-0.3
 -0.2
-0.3
 0.8
0.2
 0.2
0.2
46 AT5G15240 Transmembrane amino acid transporter family protein 831376 At5g15240 3.2 1.4
 1.8
 0.7
 676.7
 0.2
 0.1
 3.1
 -0.7
 0.9
 0.5
 0.9
-0.4
 0.8
-0.2
 1.8
0.3
 1.6
1.2
 0.7
0.2
47 RGLG2 RING domain ligase2 831293 At5g14420 3.2 3.7
 3.6
 2.8
 1043.4
 1.4
 1.0
 1.6
 1.3
 2.1
 2.7
1.4
 1.2
1.1
 1.1
0.5
 1.0
0.6
 0.8
-0.0
 1.3
0.1
48 ZFP5 zinc finger protein 5 837588 At1g10480 3.2 -0.5
 -0.3
 -0.6
 4071.9
 -0.7
 0.7
 -1.0
 1.1
 -0.1
 -0.3
-0.9
 0.4
 0.4
 -0.5
 1.2
49 ATL8 RING/U-box superfamily protein 843974 At1g76410 3.2 1.8
 1.5
 1.7
 571.7
 0.4
 2.8
 1.0
 2.7
 2.0
 1.1
0.6
 1.6
0.5
 1.0
0.6
 1.1
0.5
 1.4
0.3
 -0.2
-0.4
50 TLP7 tubby like protein 7 841766 At1g53320 3.2 1.9
 2.1
 1.2
 3124.0
 0.3
 -0.6
 1.5
 1.4
 0.5
 2.0
1.8
 1.0
-0.8
 0.2
-0.7
 0.4
 -0.2
 1.6
-0.4
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