Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.lig   RHA3B   RING-H2 finger A3B 
 ath-u.4   RHA3B   RING-H2 finger A3B 
 ath-r.6   RHA3B   RING-H2 finger A3B 
 ath-m.9   RHA3B   RING-H2 finger A3B 
 ath-m.4.notissue   RHA3B   RING-H2 finger A3B 
 ath-m.4.tis   RHA3B   RING-H2 finger A3B 
 ath-m.4.str   RHA3B   RING-H2 finger A3B 
 ath-m.4.hor   RHA3B   RING-H2 finger A3B 
 ath-m.4.bio   RHA3B   RING-H2 finger A3B 
 ath-e.1   RHA3B   RING-H2 finger A3B 

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Top 50 coexpressed genes to RHA3B (ath-m.4.lig coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath904   Diterpenoid biosynthesis; Including: Gibberellin biosynthesis  1 21 -
 ath592   alpha-Linolenic acid metabolism  1 43 -
 ath561   Glycerolipid metabolism  1 66 -
 ath564   Glycerophospholipid metabolism  1 99 -
 ath4075   Plant hormone signal transduction  3 291 -

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ath:RHA3B (RING-H2 finger A3B) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition specific* Reference

ath-m.4.lig
for
RHA3B
ath-u.4
for
RHA3B
ath-r.6
for
RHA3B
ath-m.9
for
RHA3B
ath-m.4.notissue
for
RHA3B
ath-m.4.tis
for
RHA3B
ath-m.4.str
for
RHA3B
ath-m.4.hor
for
RHA3B
ath-m.4.bio
for
RHA3B
ath-e.1
for
RHA3B
1 AT4G29780 nuclease 829100 At4g29780 5.0 1.4
 0.7
 1.6
 469.9
 2.3
 1.6
 1.4
 2.9
 0.8
2 AT5G03700 D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein 831753 At5g03700 4.9 2.5
 1.8
 2.5
 764.1
 0.3
 0.6
 1.3
 3.2
 -0.4
3 NPR3 NPR1-like protein 3 834545 At5g45110 4.7 1.5
 1.3
 1.4
 918.4
 2.1
 1.5
 1.4
 2.0
 1.1
4 AT2G23330 3768382 At2g23330 4.7

0.7
 567.9
 1.9
 1.6
 1.0
 2.0
5 AT1G19380 sugar, putative (DUF1195) 838521 At1g19380 4.7 2.2
 1.5
 2.2
 950.6
 1.4
 1.0
 1.0
 4.0
 1.7
6 NPR4 NPR1-like protein 4 827710 At4g19660 4.7 0.1
 -0.3
 0.5
 13318.0
 -0.1
 -0.4
 0.6
 -0.4
 0.4
7 SRC2 soybean gene regulated by cold-2 837428 At1g09070 4.4 2.1
 1.7
 2.0
 414.3
 2.4
 1.8
 1.6
 2.2
 2.6
8 AT3G56880 VQ motif-containing protein 824855 At3g56880 4.4 3.3
 2.6
 3.0
 174.3
 3.1
 2.0
 2.0
 3.6
 2.2
9 AT5G64450 NYN domain protein 836566 At5g64450 4.3

0.6
 1815.4
 0.9
 1.1
 0.5
 0.9
10 AOC3 allene oxide cyclase 3 822169 At3g25780 4.3 1.7
 1.4
 1.5
 566.8
 0.5
 1.6
 1.0
 2.9
 2.2
11 AT1G22510 E3 ubiquitin-protein ligase RNF170-like protein (DUF 1232) 838857 At1g22510 4.3 2.5
 2.5
 1.8
 1637.5
 0.6
 1.4
 1.6
 1.7
 1.5
12 GA2OX6 gibberellin 2-oxidase 6 839508 At1g02400 4.2 2.4
 2.1
 2.1
 21.9
 1.6
 3.3
 3.1
 3.4
 3.9
13 ERF6 ethylene responsive element binding factor 6 827463 At4g17490 4.1 1.1
 0.8
 1.2
 399.5
 0.8
 1.8
 2.2
 1.9
 0.7
14 AT5G07870 HXXXD-type acyl-transferase family protein 830680 At5g07870 4.1 -0.3
 -0.0
 -0.6
 8804.1
 -1.6
 0.5
 -0.2
 -0.6
 -0.9
15 CBL1 calcineurin B-like protein 1 827481 At4g17615 4.1 1.4
 1.0
 1.5
 266.1
 1.9
 2.4
 1.0
 2.6
 2.7
16 WRKY46 WRKY DNA-binding protein 46 819248 At2g46400 3.9 0.8
 0.4
 1.1
 778.3
 1.0
 1.8
 1.3
 1.5
 0.4
17 ASAT1 acyl-CoA sterol acyl transferase 1 824360 At3g51970 3.9 0.9
 0.9
 0.6
 1824.6
 1.5
 0.5
 3.1
 1.5
 1.9
18 AT1G65510 uncharacterized protein 842863 At1g65510 3.9 0.7
 1.0
 0.1
 5034.2
 0.5
 0.5
 0.3
 -1.1
 0.2
19 WRKY70 WRKY DNA-binding protein 70 824807 At3g56400 3.8 -0.2
 -0.4
 0.0
 4101.7
 0.1
 0.8
 0.6
 -0.4
 0.2
20 CAMBP25 calmodulin (CAM)-binding protein of 25 kDa 818701 At2g41010 3.8 1.7
 1.2
 1.8
 1729.6
 1.8
 0.8
 0.1
 2.8
 1.7
21 NIMIN1 NIM1-interacting 1 837800 At1g02450 3.7 0.4
 0.1
 0.6
 4647.2
 0.0
 1.2
 0.5
 0.0
 1.2
22 AT5G12880 proline-rich family protein 831128 At5g12880 3.7 0.6
 0.8
 0.3
 1325.1
 -0.2
 0.2
 1.3
 2.2
 0.5
23 MKS1 MAP kinase substrate 1 821400 At3g18690 3.7 3.3
 3.1
 2.7
 371.1
 0.9
 1.6
 2.2
 3.0
 3.8
24 WRKY38 WRKY DNA-binding protein 38 832320 At5g22570 3.7 0.5
 0.3
 0.5
 3383.2
 0.7
 1.0
 1.2
 -0.2
 1.0
25 AT1G28280 VQ motif-containing protein 839722 At1g28280 3.7 3.2
 2.5
 3.1
 1146.8
 1.1
 1.4
 2.0
 2.5
 2.9
26 PFA-DSP3 Tyrosine phosphatase family protein 821239 At3g02800 3.7 2.0
 1.5
 2.0
 479.7
 1.0
 2.0
 2.0
 1.8
 0.1
27 PAP1 phosphatidic acid phosphatase 1 814646 At2g01180 3.6 1.4
 1.5
 0.9
 1686.7
 0.5
 0.6
 1.3
 1.9
 3.2
28 AT5G10695 methionyl-tRNA synthetase 830934 At5g10695 3.6

1.6
 330.3
 1.4
 1.8
 2.3
 2.3
29 AT1G70740 Protein kinase superfamily protein 843411 At1g70740 3.6 1.7
 1.8
 1.3
 1285.7
 3.4
 1.2
 1.5
 0.6
 2.4
30 AT1G50740 Transmembrane proteins 14C 841496 At1g50740 3.6 2.1
 1.7
 1.9
 347.3
 1.1
 2.0
 2.4
 2.1
 2.8
31 CEJ1 cooperatively regulated by ethylene and jasmonate 1 824188 At3g50260 3.6 3.4
 3.0
 2.8
 60.5
 1.1
 3.4
 1.6
 1.9
 3.3
32 AT5G19870 transmembrane epididymal protein (DUF716) 832108 At5g19870 3.6

-0.0
 10341.2
 -0.5
 0.1
 0.1
 -0.1
33 SZF1 salt-inducible zinc finger 1 824764 At3g55980 3.6 0.6
 0.1
 0.9
 940.2
 1.9
 1.0
 1.9
 2.8
 -0.4
34 AT1G56540 Disease resistance protein (TIR-NBS-LRR class) family 842107 At1g56540 3.6 0.0
 -0.0
 0.1
 2243.1
 0.0
 0.2
 1.7
 1.6
 1.5
35 WRKY53 WRKY family transcription factor 828481 At4g23810 3.5 2.1
 2.0
 1.7
 1140.7
 1.1
 1.1
 1.6
 1.8
 3.6
36 AT4G11000 Ankyrin repeat family protein 826701 At4g11000 3.5 0.8
 0.4
 1.0
 1081.1
 0.9
 1.3
 1.6
 1.5
 0.8
37 PUB22 plant U-box 22 824410 At3g52450 3.5 2.1
 1.3
 2.3
 615.4
 -0.2
 0.8
 1.9
 4.4
 1.1
38 AT2G25735 uncharacterized protein 817115 At2g25735 3.5 2.2
 1.3
 2.5
 754.1
 0.7
 1.2
 2.9
 2.9
 1.4
39 AT2G27080 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family 817250 At2g27080 3.5 0.8
 1.0
 0.3
 1655.6
 1.3
 0.8
 1.4
 2.3
 1.0
40 AT4G00940 Dof-type zinc finger DNA-binding family protein 827952 At4g00940 3.5 -0.4
 -0.5
 -0.3
 9473.0
 0.1
 0.2
 0.9
 0.1
 0.3
41 BZIP28 Basic-leucine zipper (bZIP) transcription factor family protein 820249 At3g10800 3.5 1.5
 0.7
 1.9
 2427.7
 1.1
 0.1
 3.3
 2.1
 1.5
42 LYK5 Protein kinase superfamily protein 817923 At2g33580 3.5 2.3
 2.2
 1.8
 592.2
 2.2
 1.6
 0.8
 2.0
 3.1
43 pEARLI4 phospholipase-like protein (PEARLI 4) family protein 816630 At2g20960 3.4 2.9
 2.4
 2.6
 377.0
 0.3
 2.7
 2.6
 1.9
 4.4
44 ACA1 autoinhibited Ca2+-ATPase 1 839670 At1g27770 3.4 0.6
 0.5
 0.6
 1329.6
 0.6
 1.3
 1.1
 1.3
 1.4
45 AT3G10300 Calcium-binding EF-hand family protein 820192 At3g10300 3.4 3.7
 4.1
 2.3
 38.0
 2.1
 3.1
 1.7
 3.7
 5.2
46 JAZ1 jasmonate-zim-domain protein 1 838501 At1g19180 3.4 2.2
 1.6
 2.2
 184.8
 3.3
 2.5
 1.6
 2.4
 1.7
47 AT5G17350 uncharacterized protein 831601 At5g17350 3.4 1.6
 0.6
 2.1
 832.6
 1.4
 1.4
 2.4
 2.5
 0.1
48 AT2G22760 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 816806 At2g22760 3.4 1.5
 0.6
 2.0
 1240.5
 0.4
 1.5
 1.2
 1.0
 1.1
49 AT3G15770 uncharacterized protein 820820 At3g15770 3.4 0.1
 -0.4
 0.7
 9751.6
 1.0
 -0.2
 1.8
 0.7
 -0.2
50 AT5G28630 glycine-rich protein 832966 At5g28630 3.4 1.5
 1.6
 1.1
 874.4
 0.4
 1.4
 1.9
 2.3
 0.6
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