Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.lig   AT1G05710   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-u.4   AT1G05710   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-r.6   AT1G05710   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.9   AT1G05710   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.notissue   AT1G05710   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.tis   AT1G05710   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.str   AT1G05710   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.hor   AT1G05710   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-m.4.bio   AT1G05710   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-e.1   AT1G05710   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-u.4   AT2G31730   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 gma-u.4   100527660   uncharacterized LOC100527660 
 gma-u.4   100809747   transcription factor bHLH153 
 ppo-u.4   18104588   transcription factor bHLH153 
 mtr-u.4   11444608   transcription factor bHLH153 
 sly-u.4   543581   transcription factor bHLH113 
 osa-u.4   4334181   transcription factor bHLH113 
 osa-u.4   4336261   transcription factor bHLH153 

close


Top 50 coexpressed genes to AT1G05710 (ath-m.4.lig coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath4130   SNARE interactions in vesicular transport  1 47 -
 ath3018   RNA degradation  1 113 -
 ath4016   MAPK signaling pathway - plant  1 139 -
 ath4144   Endocytosis  1 158 -
 ath4075   Plant hormone signal transduction  3 291 -

close


ath:AT1G05710 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein) External Links;


Show/Hide Columns:        
Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition specific* Reference

ath-m.4.lig
for
AT1G05710
ath-u.4
for
AT1G05710
ath-r.6
for
AT1G05710
ath-m.9
for
AT1G05710
ath-m.4.notissue
for
AT1G05710
ath-m.4.tis
for
AT1G05710
ath-m.4.str
for
AT1G05710
ath-m.4.hor
for
AT1G05710
ath-m.4.bio
for
AT1G05710
ath-e.1
for
AT1G05710
ath-u.4
for
AT2G31730
gma-u.4
for
100527660
gma-u.4
for
100809747
ppo-u.4
for
18104588
mtr-u.4
for
11444608
sly-u.4
for
543581
osa-u.4
for
4334181
osa-u.4
for
4336261
1 AT1G05575 uncharacterized protein 837061 At1g05575 5.4 -1.1
 -1.1
 -0.8
 3611.9
 0.3
 0.8
 -0.5
 1.0
 -1.6
 0.8
-0.9
 0.3
-0.5
 0.7
0.3
 0.3
 -1.3
 -0.7
 -0.4
-0.8
 0.7
-0.1
2 SOBIR1 Leucine-rich repeat protein kinase family protein 817746 At2g31880 4.7 0.4
 0.2
 0.5
 566.4
 0.5
 1.5
 1.6
 1.6
 -0.5
 -0.7
 1.5
0.7
 0.1
-0.2
 -0.5
-0.7
 0.1
 0.9
0.0
 0.3
 -0.0
3 AT4G01740 Cysteine/Histidine-rich C1 domain family protein 828012 At4g01740 4.5 0.6
 0.1
 1.0
 1515.2
 1.2
 1.0
 0.3
 0.9
 0.3
 1.4
0.8






4 MYB51 myb domain protein 51 838438 At1g18570 4.5 -0.3
 -0.3
 -0.2
 1242.0
 0.1
 0.9
 0.7
 1.6
 -1.4
 -0.6






5 RABA4C RAB GTPase homolog A4C 834847 At5g47960 4.4 1.9
 2.2
 1.2
 1539.0
 0.4
 1.0
 0.6
 1.8
 0.3
 -0.0
 0.0
-0.7
 -0.4
-0.6
 -0.6
 0.3
 2.1
 0.7
 0.6
6 AT2G23680 Cold acclimation protein WCOR413 family 816899 At2g23680 4.4 0.9
 0.9
 0.7
 810.9
 0.1
 1.3
 0.3
 1.7
 0.3
 1.4






7 AT3G59080 Eukaryotic aspartyl protease family protein 825077 At3g59080 4.2 0.8
 0.8
 0.5
 2610.0
 -0.1
 1.1
 0.5
 1.0
 0.9
 2.1
-0.2
 1.4
1.2
 1.8
1.1
 -0.5
 -0.1
-0.5
 1.2
-0.4
 -0.2
 0.6
8 AT1G11050 Protein kinase superfamily protein 837646 At1g11050 4.2

0.0
 1446.3
 0.1
 1.3
 -0.3
 1.1

0.6
0.5
 0.7
-0.1
 -0.0
-1.0
 0.5
-0.9
 -0.5
 -0.5
-0.9
 0.4
-0.5
9 AT5G10695 methionyl-tRNA synthetase 830934 At5g10695 4.1

0.2
 7135.0
 -0.7
 -0.3
 0.0
 1.2
1.4
-0.5
 2.8
1.8
 2.3
2.0
 2.4
0.8
 -0.8
 1.3
0.0
 -0.4
-0.6
 0.3
0.2
10 AT1G56540 Disease resistance protein (TIR-NBS-LRR class) family 842107 At1g56540 4.1 0.7
 0.7
 0.6
 1128.4
 -0.6
 1.9
 -0.5
 0.9
 -0.9
 2.3
1.8






11 AT3G46930 Protein kinase superfamily protein 823846 At3g46930 4.0 0.7
 1.0
 0.3
 783.6
 -0.2
 0.9
 0.4
 1.9
 0.6
 0.3
-0.6
 0.7
0.1
 0.7
0.1
 -0.8
-0.8
 0.4
-1.6
 3.9
-0.5
 0.9
0.2
 1.0
0.5
12 MPK3 mitogen-activated protein kinase 3 823706 At3g45640 4.0 0.2
 0.6
 -0.2
 1175.0
 -0.2
 1.0
 1.4
 0.8
 -0.6
 0.3
-0.7
 1.6
1.2
 0.9
0.5
 0.7
0.4
 1.3
-0.4
 -0.4
-0.5
 0.4
-0.0
 1.4
-0.8
13 GRX480 Thioredoxin superfamily protein 839748 At1g28480 3.9 -0.6
 -0.5
 -0.6
 2720.1
 0.6
 0.6
 -0.6
 1.5
 0.1
 -1.9
 2.2
1.5
 1.6
1.4
 0.9
0.5
 1.6
1.1
 1.0
0.5
 -0.2
-0.9
 1.3
0.3
14 ACA1 autoinhibited Ca2+-ATPase 1 839670 At1g27770 3.9 0.9
 1.4
 0.2
 1654.8
 0.9
 1.6
 1.6
 0.4
 0.5
 0.2
0.1
 1.8
1.7
 1.4
0.8
 0.1
-0.4
 -0.1
-1.2
 2.3
0.6
 1.0
0.3
 0.8
0.3
15 CRCK1 calmodulin-binding receptor-like cytoplasmic kinase 1 836011 At5g58940 3.9 0.7
 0.1
 1.2
 232.5
 0.3
 1.1
 2.2
 2.0
 0.2
 0.7
 4.1
2.5
 3.0
1.4
 -0.3
 0.7
0.6
-1.2
 0.0
16 AT3G09830 Protein kinase superfamily protein 820141 At3g09830 3.9 0.2
 0.2
 0.0
 3205.3
 0.0
 0.6
 0.7
 1.1
 0.4
 0.4
0.0
 2.5
1.3
 0.3
0.1
 0.2
-1.9
 0.5
0.1
 3.2
1.9
 -0.1
-0.3
 0.9
0.6
17 NAK Protein kinase superfamily protein 831880 At5g02290 3.9 1.4
 1.2
 1.2
 1309.1
 0.1
 1.1
 1.4
 1.0
 0.5
 2.2
1.8
 2.2
2.0
 1.2
1.1
 1.1
0.1
 0.1
0.0
 1.5
1.1
 0.9
0.6
 2.1
0.9
18 NHL3 NDR1/HIN1-like 3 830520 At5g06320 3.9 0.2
 0.6
 -0.1
 1979.0
 -0.5
 0.6
 0.9
 1.9
 -0.2
 1.2
-0.0
 1.6
1.4
 0.9
0.6
 1.2
1.0
 1.2
0.1
 1.0
1.0
 -0.3
 0.4
19 ALIS1 ALA-interacting subunit 1 820456 At3g12740 3.9 0.3
 0.1
 0.4
 981.5
 0.5
 0.0
 1.0
 2.5
 0.0
 0.5
-0.1
 1.6
0.3
 0.1
-0.7
 0.7
-0.1
 0.1
-0.6
 1.3
-0.6
 0.9
-0.0
 2.3
-0.5
20 LYK5 Protein kinase superfamily protein 817923 At2g33580 3.9 1.1
 1.4
 0.5
 927.2
 -0.2
 1.1
 1.0
 1.2
 0.1
 0.0
 0.3
 0.8
 1.0
 -0.6
-0.9
0.4
 0.1
21 AT1G50740 Transmembrane proteins 14C 841496 At1g50740 3.8 1.5
 1.1
 1.6
 1247.0
 -0.1
 0.7
 0.5
 1.7
 -0.5
 0.5
0.2
 1.1
 1.1
 -0.7
-1.2
 0.3
 1.3
0.6
 0.6
 -0.7
22 GILP GSH-induced LITAF domain protein 831158 At5g13190 3.8 1.4
 1.0
 1.4
 885.2
 -0.2
 1.2
 0.9
 1.5
 0.5
 0.1
 2.1
0.4
 2.4
0.6
 -0.3
-0.3
 0.4
 0.8

23 AT5G22550 transmembrane protein, putative (DUF247) 832317 At5g22550 3.8 0.8
 0.2
 1.2
 3419.5
 0.5
 1.1
 -0.2
 -0.7
 -0.1
 0.8
0.1

0.9
0.7
 -1.4


24 CNI1 carbon/nitrogen insensitive 1 832801 At5g27420 3.8 -0.7
 -0.8
 -0.4
 1392.7
 0.1
 0.5
 0.0
 2.2
 -2.0
 0.8
0.5
 0.5
0.3
 0.6
0.5
 1.1
-0.8
 -0.3
-0.9
 0.4
-0.3
 0.5
-0.3
 -0.8
-0.8
25 AT3G04640 glycine-rich protein 819622 At3g04640 3.8 0.4
 0.4
 0.4
 3464.8
 -0.5
 0.4
 0.8
 0.9
 0.6
 0.2






26 EXO70B2 exocyst subunit exo70 family protein B2 837210 At1g07000 3.8 0.8
 -0.1
 1.5
 1524.0
 0.5
 0.9
 0.1
 1.7
 0.6
 1.3
-0.1
 1.1
-0.1
 0.0
-1.2
 0.8
0.4
 -0.4
-0.4
 1.4
 -0.3
-0.3
 2.7
-0.8
27 CAF1b Polynucleotidyl transferase, ribonuclease H-like superfamily protein 832285 At5g22250 3.8 -0.5
 -0.2
 -0.6
 3529.9
 0.3
 0.6
 -1.1
 1.1
 -1.2
 0.4
-1.0
 1.0
0.7
 0.3
0.3
 0.5
-0.3
 0.3
0.1
 0.4
-0.2
 0.1
 0.3
28 NIMIN1 NIM1-interacting 1 837800 At1g02450 3.7 -0.3
 -0.5
 -0.0
 2241.5
 1.3
 0.6
 -0.3
 1.0
 0.2
 -0.6






29 RABH1c RAB GTPase homolog H1C 830148 At4g39890 3.7 1.6
 1.8
 1.0
 1652.8
 -0.7
 0.4
 0.7
 1.6
 -0.5
 1.0
0.3
 2.3
1.7
 3.2
1.0
 0.5
0.1
 0.5
-0.3
 1.9
1.9
 0.6
0.4
 1.5
-0.3
30 IAA5 indole-3-acetic acid inducible 5 838128 At1g15580 3.7

1.2
 8314.0
 -0.8
 0.2
 0.9
 -0.9








31 AT1G70740 Protein kinase superfamily protein 843411 At1g70740 3.7 0.6
 0.6
 0.3
 1411.4
 0.1
 1.5
 -0.4
 1.1
 0.7
 -0.2
 1.9
1.0
 1.2
0.3
 0.3
-0.1
 -0.9
-1.4
 1.4
 -0.3
 2.0
32 LYK4 protein kinase family protein / peptidoglycan-binding LysM domain-containing protein 816909 At2g23770 3.7 -0.9
 -1.2
 -0.3
 14574.2
 -0.0
 -0.9
 -0.8
 0.0
 -0.6
 -0.7
 0.8
-0.3
 0.2
0.1
 -1.5
 0.7
 0.6
 0.5
 0.2
33 NAC062 NAC domain containing protein 62 824115 At3g49530 3.7 1.5
 2.0
 0.6
 816.2
 -0.3
 1.0
 1.0
 1.7
 0.6
 0.0
-0.2
 2.2
0.7
 1.5
1.0
 1.0
0.4
 1.3
0.6
 2.8
1.6

34 PSKR1 phytosulfokin receptor 1 814753 At2g02220 3.7 -0.5
 -0.7
 -0.2
 2834.3
 -0.0
 0.0
 -0.7
 1.7
 1.0
 0.4

-0.3
-0.7
-0.0
 0.9
 -0.2
35 AT4G38550 phospholipase-like protein (PEARLI 4) family protein 830012 At4g38550 3.7

0.3
 10570.3
 0.2
 -0.7
 1.2
 0.8
1.3
0.9
 0.7
0.3
 1.8
0.5
 -0.2
-1.1
 -1.3
-1.6


36 NUDT7 MutT/nudix family protein 826884 At4g12720 3.7 0.9
 0.9
 0.6
 1467.8
 0.8
 1.3
 1.2
 1.3
 0.1
 0.1
0.0






37 S6K2 serine/threonine protein kinase 2 820019 At3g08720 3.7 1.2
 1.4
 0.6
 1025.6
 -0.3
 1.0
 0.9
 1.3
 -0.6
 -0.2
-0.7
 0.2
0.0
 0.7
0.3
 -0.8
-1.0
 -0.2
 -1.6
-2.5
 -0.4
 2.7
38 WRKY70 WRKY DNA-binding protein 70 824807 At3g56400 3.6 0.2
 -0.3
 0.5
 850.7
 0.7
 1.2
 1.1
 0.9
 -0.1
 0.3
-0.4
 1.2
0.3
 0.4
-0.2
 -0.4
-0.6
 0.3
-0.5
 0.9
0.5
 1.2
0.5
 0.7
0.4
39 AT4G17070 peptidyl-prolyl cis-trans isomerase 827415 At4g17070 3.6 0.9
 0.5
 1.2
 47.4
 -0.0
 3.7
 1.0
 2.2
 0.6
 1.2
 1.5
1.3
 0.7
0.4
 0.2
0.2
 -0.4
-0.7
 1.6
 0.5
 0.4
40 SYP122 syntaxin of plants 122 824405 At3g52400 3.6 0.6
 0.2
 0.9
 1852.8
 -0.0
 0.8
 0.8
 1.4
 -0.4
 -0.3






41 NPR4 NPR1-like protein 4 827710 At4g19660 3.6 -0.7
 -0.6
 -0.6
 3669.8
 0.7
 0.5
 -0.2
 0.8
 -0.2
 0.1
-1.5
 2.9
1.8
 0.9
0.3
 0.7
-0.3
 1.4
0.2
 1.0
 -0.5
 1.0
42 AT5G18150 Methyltransferase-related protein 831933 At5g18150 3.6

0.7
 226.1
 -0.3
 2.1
 0.1
 1.8
0.6
 1.8
1.8
 1.5
1.2
 0.8
-0.6
 0.9
0.8
 0.3
 0.7
0.3
 0.2
-0.7
43 SZF1 salt-inducible zinc finger 1 824764 At3g55980 3.6 -0.1
 0.2
 -0.4
 1211.8
 -0.2
 1.7
 0.3
 0.9
 -1.1
 0.4
0.0
 0.9
0.8
 0.5
-0.4
 0.9
0.7
 0.1
-0.3
 0.9
0.5
 0.3
 -0.2
44 ERF6 ethylene responsive element binding factor 6 827463 At4g17490 3.5 -0.8
 -0.5
 -0.9
 5716.0
 0.1
 0.9
 -0.3
 -0.2
 -0.2
 -0.3
-0.5
 1.5
0.7
 0.5
-0.3
 0.8
0.3
 1.1
0.9
 0.8
0.3

45 AT4G16840 uncharacterized protein 827391 At4g16840 3.5 0.3
 0.6
 -0.0
 1199.0
 0.2
 2.2
 0.4
 1.0
 1.6
 1.0



2.3

46 AT5G10830 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 830950 At5g10830 3.5 1.8
 1.7
 1.4
 3303.8
 0.8
 1.5
 0.4
 0.1
 1.4
 0.5
0.5

-0.5
-0.9

1.0
0.5
 -0.4
-0.8
47 NPR3 NPR1-like protein 3 834545 At5g45110 3.5 -0.3
 0.1
 -0.6
 1235.2
 0.1
 1.0
 0.7
 1.6
 -0.4
 0.1
-1.5
 2.9
1.8
 0.9
0.3
 0.7
-0.3
 1.4
0.2
 1.0
 -0.5
 1.0
48 AT1G55450 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 841992 At1g55450 3.5 -0.2
 -0.1
 -0.4
 5515.2
 0.1
 0.6
 0.6
 0.6
 -0.6
 0.4






49 ATSIK Protein kinase superfamily protein 820023 At3g08760 3.5 0.0
 0.4
 -0.4
 11390.7
 -0.2
 -1.8
 -0.8
 1.9
 -0.2
 -0.9
 0.4
-0.1
 -0.1
-0.4
 -0.1
-0.8
 -1.4
-2.4
 1.3
0.5
 0.1
 -0.5
50 AT2G23200 Protein kinase superfamily protein 816852 At2g23200 3.5 -0.5
 -0.4
 -0.4
 6878.0
 0.3
 0.6
 1.0
 0.0
 0.0
 -0.3
 0.9
-0.8
 -1.3
-1.8
 0.4
-0.2
 -0.4
 0.8

The preparation time of this page was 2.7 [sec].