Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.lig   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-u.4   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-r.6   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-m.9   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-m.4.notissue   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-m.4.tis   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-m.4.str   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-m.4.hor   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-m.4.bio   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 ath-e.1   NRB4   mediator of RNA polymerase II transcription subunit 15a-like protein 
 gma-u.4   100782132   mediator of RNA polymerase II transcription subunit 15a-like 
 gma-u.4   100783762   mediator of RNA polymerase II transcription subunit 15a 
 gma-u.4   100792913   mediator of RNA polymerase II transcription subunit 15a 
 ppo-u.4   18096675   mediator of RNA polymerase II transcription subunit 15a 
 ppo-u.4   7470541   mediator of RNA polymerase II transcription subunit 15a 
 ppo-u.4   112323243   mediator of RNA polymerase II transcription subunit 15a-like 
 mtr-u.4   11430217   mediator of RNA polymerase II transcription subunit 15a 
 mtr-u.4   11442044   mediator of RNA polymerase II transcription subunit 15a 
 sly-u.4   101257852   mediator of RNA polymerase II transcription subunit 15a 
 osa-u.4   4346348   mediator of RNA polymerase II transcription subunit 15a 

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Top 50 coexpressed genes to NRB4 (ath-m.4.lig coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath400   Phenylalanine, tyrosine and tryptophan biosynthesis  2 56 -
 ath270   Cysteine and methionine metabolism  2 124 -
 ath500   Starch and sucrose metabolism  2 172 -
 ath3040   Spliceosome  3 203 -
 ath1230   Biosynthesis of amino acids  2 244 -

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ath:NRB4 (mediator of RNA polymerase II transcription subunit 15a-like protein) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition specific* Reference

ath-m.4.lig
for
NRB4
ath-u.4
for
NRB4
ath-r.6
for
NRB4
ath-m.9
for
NRB4
ath-m.4.notissue
for
NRB4
ath-m.4.tis
for
NRB4
ath-m.4.str
for
NRB4
ath-m.4.hor
for
NRB4
ath-m.4.bio
for
NRB4
ath-e.1
for
NRB4
gma-u.4
for
100782132
gma-u.4
for
100783762
gma-u.4
for
100792913
ppo-u.4
for
18096675
ppo-u.4
for
7470541
ppo-u.4
for
112323243
mtr-u.4
for
11430217
mtr-u.4
for
11442044
sly-u.4
for
101257852
osa-u.4
for
4346348
1 AT5G58450 Tetratricopeptide repeat (TPR)-like superfamily protein 835958 At5g58450 4.8 1.1
 1.6
 0.4
 10168.8
 -0.7
 -0.3
 0.8
 -0.2
 2.2
 1.7
1.0
 1.4
0.7
 0.2
-0.0
 0.2
 0.7
 -0.3
 2.5
 0.8
 2.4
 1.9
2 RPL3B R-protein L3 B 842454 At1g61580 4.7 -0.2
 -0.4
 0.1
 6048.9
 -1.2
 -0.1
 0.4
 0.9
 -0.5
 -0.6
-0.9
 0.1
-1.1
 -0.1
-0.4
 -1.0
-1.2
 -1.5
-1.5
 -0.8
-1.1
 -0.3
-1.1
 -1.1
-2.2
 -0.4
-0.9
 -0.4
-1.7
3 CDKC2 cyclin dependent kinase group C2 836620 At5g64960 4.7 2.1
 1.4
 2.3
 1367.2
 -0.2
 0.4
 2.4
 2.3
 -0.7
 1.2
0.9
 1.8
1.3
 1.4
1.2
 2.5
0.3
 1.6
0.9
 2.4
0.8
 0.9
0.1
 1.7
-0.6
 1.9
0.7
 1.4
4 AXR1 NAD(P)-binding Rossmann-fold superfamily protein 839286 At1g05180 4.5 0.5
 0.9
 0.0
 3881.8
 -0.8
 0.3
 1.9
 0.8
 1.4
 0.8
0.8
 0.9
0.7
 0.9
0.7
 -0.1
-1.5
 0.2
0.2
 -0.4
-1.8
 -0.2
 -1.8
 0.1
0.1
 0.3
5 RPT4A regulatory particle triple-A ATPase 4A 834316 At5g43010 4.5 1.4
 2.1
 0.3
 1864.9
 -0.8
 1.0
 0.9
 1.4
 1.8
 0.3
-0.1
 2.6
-0.7
 1.9
0.2
 0.0
-1.0
 -0.5
-0.5
 0.1
-1.1
 1.0
0.4
 1.2
0.1
 1.6
0.4
 -0.4
-1.3
6 AT1G29250 Alba DNA/RNA-binding protein 839799 At1g29250 4.3 0.1
 0.2
 0.1
 18238.6
 -1.6
 -1.9
 -0.1
 -0.1
 -1.4
 -0.7
-1.9
 -1.2
-2.1
 -1.6
-1.9
 -1.4
-1.4
 -1.9
-2.3
 -1.1
-1.3
 0.0
-0.3
 -1.1
-1.5
 -0.1
-1.4
 -0.8
-1.8
7 AT4G15770 RNA binding protein 827257 At4g15770 4.0 -0.7
 -0.5
 -0.7
 10640.8
 -1.4
 -1.0
 0.3
 0.2
 0.9
 -0.4
-0.6
 -1.0
-1.3
 -0.2
-0.8
 -2.6
 -1.1
 -2.6
 -0.2
 -1.5
 0.3
 -2.0
8 PDR2 phosphate deficiency response 2 832428 At5g23630 4.0 7.3
 6.0
 6.7
 70.0
 1.6
 2.6
 2.7
 1.5
 3.7
 1.7
0.9
 2.2
1.2
 2.1
1.6
 1.8
0.7
 1.7
0.7
 1.9
0.7
 2.8
 1.4
 3.1
 2.2
9 AMSH1 associated molecule with the SH3 domain of STAM 1 841301 At1g48790 4.0 4.0
 3.7
 3.2
 2808.0
 2.0
 -0.1
 2.9
 2.0
 2.8
 3.5
3.2
 5.2
4.2
 3.9
3.6
 3.2
1.5
 3.1
1.0
 3.5
1.5
 1.4
0.9
 4.8
4.4
 4.7
4.0
 3.3
1.9
10 AT2G33730 P-loop containing nucleoside triphosphate hydrolases superfamily protein 817938 At2g33730 4.0 3.1
 2.7
 2.7
 750.2
 0.2
 1.0
 3.2
 1.9
 2.9
 0.8
0.6
 1.7
1.4
 2.2
2.1
 0.8
-0.5
 1.7
0.3
 0.7
-0.3
 3.0
 3.3
 1.7
0.9
 1.5
11 AT1G42440 pre-rRNA-processing TSR1-like protein 840848 At1g42440 3.9 1.7
 1.3
 1.7
 4004.4
 -0.7
 0.3
 0.9
 0.7
 2.8
 0.3
0.0
 -0.2
-0.6
 0.9
0.9
 -0.6
 1.5
 -0.4
 1.6
 0.3
 1.2
 0.5
12 MUG1 3768800 At3g04605 3.9

3.0
 835.0
 0.3
 0.5
 1.9
 1.6










13 STIPL1 GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain-containing protein 838277 At1g17070 3.9 3.7
 2.6
 3.9
 974.3
 0.4
 1.2
 1.8
 0.8
 1.2
 2.0
1.8
 4.8
3.2
 3.0
2.3
 3.6
3.2
 3.0
1.8
 3.3
2.7
 1.6
 3.4
 2.2
 1.6
14 AT1G71840 transducin family protein / WD-40 repeat family protein 843514 At1g71840 3.8 0.0
 -0.1
 0.2
 4244.0
 -0.3
 0.4
 1.0
 0.6
 1.1
 2.4
-0.5
 1.7
-1.2
 1.6
-0.5
 -0.1
 -0.3
 -0.0
 -0.9
 -1.3
 1.6
 -1.0
15 SUS1 sucrose synthase 1 832206 At5g20830 3.8 2.1
 1.6
 2.0
 1770.7
 2.3
 1.5
 0.7
 1.4
 0.3
 1.8
1.4
 1.4
1.2
 0.7
0.7
 0.9
-0.3
 2.1
-0.4
 1.2
-0.3
 1.4
1.1
 3.1
1.9
 1.7
-0.1
 2.3
0.6
16 eIFiso4G2 MIF4G domain-containing protein / MA3 domain-containing protein 816939 At2g24050 3.7 2.0
 0.7
 2.7
 4345.2
 -1.1
 0.5
 0.9
 -0.4
 1.6
 1.3
1.2
 1.6
0.9
 2.0
1.6
 0.8
0.5
 1.5
1.1
 0.7
0.3
 2.8
 1.4
 0.3
 0.4
0.4
17 AT4G39270 Leucine-rich repeat protein kinase family protein 830083 At4g39270 3.7 3.2
 2.5
 2.9
 149.6
 1.0
 2.3
 1.3
 2.9
 2.2









18 ASP2 aspartate aminotransferase 2 832075 At5g19550 3.7 2.0
 2.5
 1.0
 2626.5
 1.3
 1.0
 1.0
 1.9
 2.8
 0.2
-0.1
 1.7
0.8
 1.0
0.7
 0.9
0.7
 1.2
0.8
 0.9
0.8
 1.6
 1.5
 1.3
0.1
 0.1
19 AT2G39795 Mitochondrial glycoprotein family protein 818565 At2g39795 3.7 1.0
 0.5
 1.2
 6324.3
 -0.7
 -0.5
 0.9
 0.8
 -0.4
 -0.2
-0.3
 0.1
-0.5
 0.7
0.1
 -0.9
-1.4
 -1.7
-1.7
 -0.9
-1.2
 0.6
0.2
 -0.7
-1.3
 0.7
 -1.7
20 AT3G12640 RNA binding (RRM/RBD/RNP motifs) family protein 820444 At3g12640 3.6 3.1
 2.0
 3.3
 1537.9
 1.7
 0.3
 2.5
 1.2
 0.9
 1.2
1.1
 2.4
1.9
 2.1
2.0
 2.0
0.4
 1.8
1.4
 1.9
0.3
 0.8
0.6
 2.5
0.8
 1.2
 2.6
2.4
21 AT4G36610 alpha/beta-Hydrolases superfamily protein 829813 At4g36610 3.6 -0.1
 -0.5
 0.3
 1405.1
 0.5
 1.5
 0.4
 0.4
 -1.1
 -0.2
 -0.2
 -0.7
 0.3
0.1
 0.1
-0.1
 0.1
-0.1
 0.2
 0.6
 -0.4
 0.1
22 AT1G18850 uncharacterized protein 838466 At1g18850 3.6 -0.8
 -1.2
 -0.2
 5372.9
 -1.0
 -0.3
 0.9
 0.9
 0.0
 -1.5
-1.9
 -1.3
-1.7
 0.2
-1.4
 -2.0
 -1.2
 -2.2
 -1.4
 0.2
 0.2
 -2.1
23 AT1G71210 Pentatricopeptide repeat (PPR) superfamily protein 843461 At1g71210 3.5 0.6
 0.9
 0.1
 2589.3
 -0.1
 0.4
 1.3
 1.3
 1.2
 0.4
-0.4
 1.1
0.4
 2.1
1.2
 -0.9
 0.5
 -0.9
 2.5
1.5
 -0.5
-0.8
 1.3
 1.5
24 AT2G04400 Aldolase-type TIM barrel family protein 814980 At2g04400 3.5 1.3
 1.2
 1.0
 295.2
 -0.6
 2.4
 1.5
 2.1
 0.6
 1.2
-0.2
 1.5
0.5
 0.6
0.0
 -0.7
 -0.4
 -0.3
 0.5
 -1.9
 0.1
 -0.3
25 KU70 ATP-dependent DNA helicase 2 subunit Ku70-like protein 838268 At1g16970 3.5 1.1
 0.5
 1.3
 2925.3
 -0.3
 0.1
 0.9
 1.3
 1.1
 1.1
 2.0
 1.9
 -0.0
 0.4
 -0.1
 1.0
 0.5
 0.5
 -1.6
26 BGLU10 beta glucosidase 10 828896 At4g27830 3.5 0.2
 -0.1
 0.5
 254.4
 1.2
 1.8
 1.2
 1.9
 0.6
 1.7
1.7
 0.4
-0.1
 0.2
-0.0


0.1
-0.4
 1.4
0.5
 -0.1
-1.0
 0.8
0.2
27 COX17 cytochrome c oxidase 17 820770 At3g15352 3.5 2.2
 2.2
 1.7
 890.0
 0.8
 1.3
 1.5
 1.7
 1.2
 0.4
-1.1
 1.7
0.4
 1.4
0.1
 -0.7
 -1.8
 -0.8
 -0.8
-0.8
 0.5
-0.3
 -0.3
-1.2
 -1.1
-1.7
28 IBR3 acyl-CoA dehydrogenase-like protein 819865 At3g06810 3.5 4.5
 4.3
 3.5
 214.2
 2.9
 3.3
 1.1
 1.6
 2.0
 2.7
1.9
 1.7
1.3
 2.1
0.0
 3.0
2.4
 2.6
0.9
 3.2
2.5
 1.0
 3.1
 1.2
0.7
 2.7
29 AT2G19540 Transducin family protein / WD-40 repeat family protein 816473 At2g19540 3.5 1.1
 1.2
 0.6
 2406.8
 -0.4
 0.6
 1.5
 0.8
 2.8
 0.4
-0.6
 -0.6
-1.2
 0.7
-0.2
 -1.4
-1.9
 -0.2
-0.3
 -1.4
-2.0
 -0.5
-0.6
 -0.8
-1.4
 0.1
 -0.6
-1.2
30 AT4G28450 WD repeat and SOF domain-containing protein 1 828962 At4g28450 3.5 -0.6
 -0.3
 -0.8
 4287.1
 -1.1
 0.0
 0.5
 0.8
 0.8
 -1.8
 -1.4
 -1.1
 -0.6
-1.4
 -0.0
-0.7
 -0.7
-1.4
 -1.1
 0.3
 -0.6
 1.7
31 AT5G48970 Mitochondrial substrate carrier family protein 834956 At5g48970 3.4 0.5
 0.1
 0.7
 3282.9
 0.6
 0.7
 1.6
 0.6
 1.8
 -0.0
-0.3
 1.5
1.2
 1.0
0.5
 1.2
1.1
 1.4
0.4
 1.3
1.2
 -0.7
-2.0
 -0.2
-0.2
 -0.1
-0.4
 -1.0
32 AT5G51280 DEAD-box protein abstrakt 835202 At5g51280 3.4 1.8
 1.6
 1.5
 1682.9
 0.4
 0.9
 0.9
 1.0
 0.5
 0.5
-1.0
 1.0
0.5
 0.7
0.3
 3.0
 1.1
 3.0
 1.2
0.7
 2.2
-0.5
 0.5
-1.5
 0.8
0.2
33 CAT4 cationic amino acid transporter 4 821176 At3g03720 3.4 1.4
 1.9
 0.5
 1615.5
 2.4
 0.6
 2.3
 1.7
 -0.1
 2.4
1.8
 1.5
0.8
 1.3
0.6
 2.3
1.3
 2.6
1.9
 1.9
1.3
 2.7
2.1
 2.3
2.2
 2.0
1.0
 1.7
34 AT5G13610 sporulation RMD1-like protein, putative (DUF155) 831205 At5g13610 3.4 0.2
 -0.2
 0.6
 7618.7
 -0.7
 -0.4
 1.7
 0.6
 0.5
 -0.3
 0.0
 -0.9
 1.8
0.0
 1.9
-0.1
 1.4
0.5
 0.3
 0.6
 0.0
 -0.9
35 AT4G17260 Lactate/malate dehydrogenase family protein 827440 At4g17260 3.4 0.8
 1.4
 -0.0
 2224.2
 -1.4
 1.7
 0.0
 0.3
 0.3
 0.5
-0.4
 2.2
0.9
 1.6
0.0
 0.7
 0.4
 0.9
 1.7
-0.8
 -0.1
-0.3
 -0.1
-0.3
 0.5
-0.5
36 Y14 RNA-binding (RRM/RBD/RNP motifs) family protein 841576 At1g51510 3.4 0.9
 0.6
 0.9
 5560.8
 -1.2
 0.3
 0.7
 0.1
 -1.8
 -0.7
-3.0
 -1.8
-2.0
 -1.0
-1.9
 -2.5
-2.8
 -1.4
-3.0
 -1.7
-2.6
 -1.1
 -2.1
 -0.8
 -0.9
37 AT5G03030 Chaperone DnaJ-domain superfamily protein 831703 At5g03030 3.4 1.0
 0.7
 1.0
 1933.8
 -0.2
 0.8
 1.5
 0.8
 -1.2









38 CSDP1 cold shock domain protein 1 829758 At4g36020 3.4 0.1
 -0.4
 0.6
 3013.7
 -1.3
 0.6
 1.4
 0.8
 0.5
 0.4
-0.1
 0.7
0.2
 0.6
0.0
 0.0
-0.0
 -0.4
-0.5
 -0.2
-0.3
 0.5
 0.1
 0.9
0.2
 -0.3
-1.6
39 PELPK2 hydroxyproline-rich glycoprotein family protein 830811 At5g09520 3.3 0.3
 -0.2
 0.7
 1624.7
 1.0
 1.5
 0.1
 0.5
 -0.7









40 ELF7 hydroxyproline-rich glycoprotein family protein 844312 At1g79730 3.3 5.8
 4.7
 5.3
 19.0
 0.4
 2.4
 5.3
 2.5
 3.2
 4.0
3.0
 5.7
5.2
 4.6
4.0
 4.2
2.2
 3.8
3.2
 4.2
2.4
 1.3
 5.1
 5.2
 1.2
41 AT5G15980 Pentatricopeptide repeat (PPR) superfamily protein 831455 At5g15980 3.3 0.1
 -0.3
 0.5
 6965.4
 -0.6
 0.0
 -0.4
 0.7
 1.3
 -0.8
-1.0
 -0.3
-0.7
 0.5
0.3
 -0.6
-0.9
 0.4
-0.7
 -0.6
-0.9
 2.4
 -0.6
 1.6
42 AT1G55240 proteinase inhibitor I4, serpin (DUF716) 841967 At1g55240 3.3 0.2
 0.7
 -0.3
 1398.1
 0.4
 1.5
 0.6
 0.6
 -0.2
 0.5
-0.2
 1.9
1.7
 1.0
1.0
 0.2
-0.1
 0.3
0.2
 0.1
0.0
 -1.9
 0.1
 1.4
-0.6
 -0.1
43 MGE1 Co-chaperone GrpE family protein 835613 At5g55200 3.3 1.3
 1.3
 1.0
 1159.6
 1.4
 1.3
 0.9
 1.6
 1.4
 -0.2
-0.4
 -0.0
-0.4
 0.8
0.7
 -2.4
-3.2
 -1.9
-2.0
 -2.1
-2.8
 0.3
-0.5
 -0.9
-1.0
 1.3
-1.0
 -0.9
-2.1
44 DRP3A dynamin-related protein 3A 829506 At4g33650 3.3 3.2
 4.3
 1.3
 368.9
 1.0
 1.7
 1.9
 1.3
 4.5
 2.1
1.2
 2.6
2.2
 1.8
0.9
 1.2
1.0
 2.3
1.8
 1.1
0.6
 2.1
1.6
 2.9
2.5
 3.5
2.9
 3.7
45 AT5G13900 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 831237 At5g13900 3.3 -0.2
 -0.5
 0.1
 6241.3
 0.5
 0.6
 -0.3
 -0.2
 -0.5





-0.9
 -1.1

46 CRF6 cytokinin response factor 6 825336 At3g61630 3.3 -0.3
 -0.6
 0.1
 3056.8
 1.6
 1.2
 -0.4
 1.2
 -0.5
 2.8
1.4
 2.4
1.6
 2.6
1.5
 0.9
-0.4
 1.7
0.4
 0.7
-0.5
 1.2
0.3
 1.2
0.5
 -0.4
-0.4
47 PNM1 Pentatricopeptide repeat (PPR) superfamily protein 836217 At5g60960 3.3 -1.0
 -1.3
 -0.5
 6839.0
 -1.0
 -0.4
 0.7
 0.5
 -0.4
 0.7
-0.1
 1.6
0.5
 1.1
0.8
 0.2
 0.4
 0.3
 -0.9
 -1.0
 -0.3
 -1.6
48 AT5G20160 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 832138 At5g20160 3.2 0.2
 0.1
 0.3
 10280.0
 -1.2
 -0.8
 0.4
 0.4
 3.7









49 TIM13 translocase of the inner mitochondrial membrane 13 842453 At1g61570 3.2 0.8
 0.7
 0.7
 10018.1
 -1.0
 -0.9
 0.0
 0.5
 0.2







-0.3
 -2.5
50 AT1G04945 HIT-type Zinc finger family protein 5007664 At1g04945


















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