Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.lig   AT1G66260   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-u.4   AT1G66260   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-r.6   AT1G66260   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.9   AT1G66260   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.notissue   AT1G66260   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.tis   AT1G66260   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.str   AT1G66260   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.hor   AT1G66260   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.bio   AT1G66260   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-e.1   AT1G66260   RNA-binding (RRM/RBD/RNP motifs) family protein 
 ath-u.4   ALY4   ALWAYS EARLY 4 
 gma-u.4   100820344   THO complex subunit 4D 
 gma-u.4   100801491   THO complex subunit 4D 
 ppo-u.4   18106636   THO complex subunit 4D 
 ppo-u.4   7493558   THO complex subunit 4D 
 mtr-u.4   11406653   THO complex subunit 4D 
 sly-u.4   101268859   THO complex subunit 4D-like 
 sly-u.4   101256343   THO complex subunit 4D 
 osa-u.4   4345621   THO complex subunit 4D 

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Top 50 coexpressed genes to AT1G66260 (ath-m.4.lig coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)
 ath3040   Spliceosome  3 179 4.06
 ath52   Galactose metabolism  1 57 -
 ath4626   Plant-pathogen interaction  2 204 -
 ath4141   Protein processing in endoplasmic reticulum  2 215 -
 ath1240   Biosynthesis of cofactors  2 236 -

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ath:AT1G66260 (RNA-binding (RRM/RBD/RNP motifs) family protein) External Links;


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Show Coexpressed Genes
CoexMap
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition specific* Reference

ath-m.4.lig
for
AT1G66260
ath-u.4
for
AT1G66260
ath-r.6
for
AT1G66260
ath-m.9
for
AT1G66260
ath-m.4.notissue
for
AT1G66260
ath-m.4.tis
for
AT1G66260
ath-m.4.str
for
AT1G66260
ath-m.4.hor
for
AT1G66260
ath-m.4.bio
for
AT1G66260
ath-e.1
for
AT1G66260
ath-u.4
for
ALY4
gma-u.4
for
100820344
gma-u.4
for
100801491
ppo-u.4
for
18106636
ppo-u.4
for
7493558
mtr-u.4
for
11406653
sly-u.4
for
101268859
sly-u.4
for
101256343
osa-u.4
for
4345621
1 AT1G65280 DNAJ heat shock N-terminal domain-containing protein 842835 At1g65280 5.5 1.4
 1.0
 1.5
 3019.9
 -0.3
 0.3
 2.1
 -0.7
 0.4
 2.8
 4.4
1.3
 3.1
0.3
 2.7
 0.4
 2.3
 1.8
 1.0
 1.0
2 RS31 RNA-binding (RRM/RBD/RNP motifs) family protein 825359 At3g61860 5.1 4.0
 3.8
 3.1
 6932.5
 -1.0
 0.1
 0.7
 -0.6
 1.2
 5.9
5.2
 7.2
6.6
 6.5
4.0
 3.7
3.6
 2.8
2.1
 3.6
3.2
 8.0
6.4
 3.2
2.9
 1.4
1.3
3 GT-1 Homeodomain-like superfamily protein 837905 At1g13450 4.6 1.4
 1.2
 1.3
 2719.7
 0.2
 -0.4
 1.4
 1.4
 0.6
 0.9
 2.3
1.2
 1.5
0.4
 1.1
0.2
 0.4
-0.4
 0.5
 2.0
 2.2
 1.2
4 AT4G16830 Hyaluronan / mRNA binding family 827389 At4g16830 4.6 1.7
 1.0
 2.0
 7378.1
 -1.0
 -0.3
 1.5
 -0.1
 0.6
 3.1
0.9
 3.4
3.0
 4.0
3.2
 2.5
2.4
 0.2
-1.2
 1.6
1.1
 2.6
1.5
 3.8
2.9
 3.1
1.8
5 ATU2AF65A U2 snRNP auxilliary factor, large subunit, splicing factor 829822 At4g36690 4.5 4.6
 3.9
 4.1
 2186.3
 2.1
 -0.7
 2.2
 0.5
 2.1
 4.2
2.9
 4.8
4.1
 5.7
4.3
 3.5
2.9
 2.2
0.4
 2.4
1.0
 5.4
4.4
 4.4
2.6
 3.8
3.0
6 AT1G61100 disease resistance protein (TIR class) 842403 At1g61100 4.4 1.8
 1.8
 1.3
 212.6
 0.7
 2.4
 2.8
 1.9
 2.2
 -1.1
-2.1
 -0.5
-0.9
 -0.4
-0.6
 0.2
0.0
 -0.2
-0.6
 0.7
-0.8
 -0.4
-1.0
 0.1
-1.9
7 AT1G15200 protein-protein interaction regulator family protein 838086 At1g15200 4.3 3.8
 2.9
 3.6
 1070.4
 -0.8
 1.2
 2.6
 -0.3
 0.7
 3.9
 4.3
2.8
 4.0
2.8
 4.2
1.8
 2.6
0.9
 0.8
 4.1
 2.3
 3.1
8 AT1G53400 Ubiquitin domain-containing protein 841776 At1g53400 4.3 2.2
 2.1
 1.7
 2490.6
 1.1
 -0.8
 1.4
 2.0
 1.1
 1.1
 -0.4
-0.8
 -0.8
-0.9
 0.9
-0.0
 0.4
0.3
 0.8
 -0.1
-1.4
 0.3
-1.3
 0.8
0.3
9 AT2G02160 CCCH-type zinc finger family protein 814747 At2g02160 4.1 1.0
 0.7
 1.1
 11494.2
 0.2
 -1.1
 0.7
 -0.7
 0.4
 3.2
 1.9
1.5
 1.3
0.0
 3.0
1.8
 1.0
0.8
 0.9
 4.3
3.6
 3.3
2.2
 0.4
10 AT5G55100 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 835601 At5g55100 4.1 2.5
 2.2
 2.1
 347.3
 2.6
 0.8
 3.3
 1.8
 1.6
 1.6
 3.2
2.4
 1.8
1.2
 1.4
 1.0
 0.2
 3.1
 0.8
 1.4
11 AT1G04985 triacylglycerol lipase-like protein 839352 At1g04985 4.1 2.2
 2.3
 1.6
 959.1
 1.6
 1.0
 1.5
 0.7
 1.2
 2.8
 0.3
 -0.9
 0.7
 0.7
1.6
 1.5
 0.1
12 INO80 DNA helicase INO80-like protein 824897 At3g57300 4.0 1.1
 0.1
 1.8
 2404.5
 -0.4
 -0.2
 2.7
 -0.6
 0.7
 1.8
 1.8
0.9
 1.2
1.0
 1.8
1.2
 0.3
-0.4
 -0.5
 1.4
 1.7
 0.4
13 AT5G61450 P-loop containing nucleoside triphosphate hydrolases superfamily protein 836266 At5g61450 4.0 1.0
 0.8
 1.0
 5774.7
 1.0
 -0.0
 1.2
 0.6
 -0.5
 -0.2
 0.4
-0.7
 0.4
-0.5
 -0.6
-0.8
 0.5
-0.3
 0.3
 1.7
 -0.2
 2.0
0.9
14 ATGRIP Golgi-localized GRIP domain-containing protein 836733 At5g66030 3.9 1.7
 1.6
 1.4
 7103.5
 2.5
 -1.6
 2.1
 -0.3
 0.5
 0.5
 -0.0
-0.7
 0.4
0.0
 1.5
 -0.6
 1.1
 2.4
 -0.9
 1.3
15 AT5G53800 nucleic acid-binding protein 835461 At5g53800 3.9 2.8
 2.3
 2.6
 2259.7
 -0.9
 0.8
 2.1
 -0.1
 1.2
 3.1
 4.0
3.2
 2.6
2.6
 2.4
 1.0
 0.5
 3.3
 3.0
 0.3
16 HOS15 WD-40 repeat family protein 836867 At5g67320 3.8 2.7
 3.2
 1.5
 5933.0
 0.0
 -0.9
 1.7
 -0.4
 1.4
 2.3
 3.3
2.2
 2.1
1.2
 1.3
0.6
 1.0
-0.3
 2.2
2.1
 1.4
 0.9
 0.8
17 AT3G17160 uncharacterized protein 820973 At3g17160 3.8 1.4
 1.1
 1.3
 6060.9
 -0.9
 0.5
 1.4
 -1.4
 1.0








18 ELF9 RNA binding (RRM/RBD/RNP motifs) family protein 831486 At5g16260 3.8 2.1
 1.5
 2.2
 1988.5
 -0.6
 0.5
 1.5
 0.1
 2.4
 1.5
 2.8
2.8
 2.7
2.2
 0.4
-0.2
 0.2
0.1
 0.3
 1.6
 0.8
 -0.3
19 AT2G27500 Glycosyl hydrolase superfamily protein 817295 At2g27500 3.8 2.4
 2.5
 1.7
 380.4
 0.3
 2.0
 0.0
 2.8
 2.4
 0.3
 -0.6
-0.8
 -0.8
-1.0
 0.6
0.3
 1.2
-0.5
 1.3
-0.8
 -0.4
 -0.6
 -0.2
-2.1
20 AT5G16730 weak chloroplast movement under blue light protein (DUF827) 831536 At5g16730 3.8 1.4
 1.3
 1.2
 687.3
 -0.9
 1.4
 3.2
 0.8
 2.4
 -1.7
-2.1
 -0.1
-1.0
 1.0
-0.2
 -0.0
-0.7
 -1.3
-2.1
 0.2
0.1
 0.7
-0.8
 -1.0
-2.3
 -0.4
21 REV1 DNA-directed DNA polymerase 834504 At5g44750 3.8 2.3
 2.4
 1.5
 9759.0
 1.2
 -0.8
 1.7
 -1.2
 2.3
 1.0
 0.0
 0.0
 1.3
 1.3
 0.4
 1.9
 2.7
 2.9
22 AT5G24890 stress response NST1-like protein 832558 At5g24890 3.8 -0.5
 0.2
 -1.1
 7943.1
 -1.7
 0.6
 -0.4
 -0.8
 0.9
 0.7
0.6
 0.5
0.4
 -0.5
-0.7
 1.1
0.4
 2.1
0.6
 0.9
0.4

-0.3
-0.6
23 AT5G25210 uncharacterized protein 832592 At5g25210 3.7 0.0
 0.1
 -0.1
 21376.5
 0.5
 -1.9
 -0.4
 -1.5
 -0.2
 1.8
-0.6
 2.0
1.2
 0.3
0.2
 1.3
 1.4
 1.2


24 AT1G71080 RNA polymerase II transcription elongation factor 843448 At1g71080 3.7 0.4
 0.6
 0.2
 5173.6
 0.6
 -0.4
 -1.2
 2.1
 -0.7
 2.5
-0.5
 1.9
1.9
 0.5
0.3
 1.0
0.9
 1.4
1.0
 1.4
 3.7
 1.5
 0.3
25 AT5G11720 Glycosyl hydrolases family 31 protein 831044 At5g11720 3.7 0.4
 0.4
 0.2
 17787.4
 1.5
 -1.7
 0.8
 -1.6
 -0.5
 -1.6
 -0.4
-1.2
 0.7
0.1
 1.5
0.2
 0.7
-0.2
 -1.9
-2.0
 1.7
-1.5
 3.6
-0.5
 -0.5
-0.9
26 SUA suppressor of abi3-5 824590 At3g54230 3.7 3.4
 3.4
 2.6
 895.3
 -0.8
 1.0
 3.4
 0.4
 1.9
 3.8
 1.6
1.6
 1.2
1.1
 3.0
2.5
 0.4
-0.2
 2.2
 7.0
 2.9
 3.0
27 AT3G60180 P-loop containing nucleoside triphosphate hydrolases superfamily protein 825188 At3g60180 3.7 -0.5
 -0.1
 -0.8
 19754.8
 -0.0
 -1.3
 0.3
 -1.2
 -0.2
 0.7
-0.3
 1.6
0.9
 2.2
1.5
 1.5
1.2
 0.1
-1.0
 1.1
 1.4
0.4
 1.0
0.4
 0.2
0.0
28 AT2G24830 zinc finger (CCCH-type) family protein / D111/G-patch domain-containing protein 817020 At2g24830 3.7 1.5
 0.8
 1.8
 5211.9
 3.7
 -0.5
 1.0
 -0.3
 2.0
 0.8
 1.0
0.7
 -0.2
-0.2
 0.4
 3.5
 0.1
 2.1
 0.7
 0.1
29 AT1G64880 Ribosomal protein S5 family protein 842796 At1g64880 3.6 1.4
 -0.6
 3.0
 8761.1
 0.3
 0.6
 0.8
 -1.2
 -0.3
 -0.2
 2.0
1.7
 1.6
1.2
 -0.2
 -0.5
 0.6
 -0.6
 -0.0
 0.8
30 AT3G29075 glycine-rich protein 822552 At3g29075 3.6 2.6
 2.2
 2.4
 41.0
 1.5
 0.7
 3.8
 4.2
 0.2
 0.2
 1.3
1.1
 2.6
2.3
 1.3
1.1
 1.4
0.1
 0.4
 3.6
1.2
 2.1
-0.0
 -0.6
31 CPK33 calcium-dependent protein kinase 33 841492 At1g50700 3.6 2.1
 1.2
 2.3
 6077.5
 0.5
 0.5
 -0.4
 0.2
 0.1
 0.5
0.2
 2.4
1.2
 2.5
1.4
 0.9
0.9
 0.3
-0.6
 1.0
0.8
 1.3
0.7
 3.6
1.6
 -0.4
32 AT1G21730 P-loop containing nucleoside triphosphate hydrolases superfamily protein 838777 At1g21730 3.6 0.1
 -0.8
 1.0
 13980.0
 0.4
 -1.7
 1.6
 -1.2
 -0.8
 -1.6
 0.1
 -0.3
 -0.5
 1.4
-0.3
 0.1
 0.5
33 CCT1 phosphorylcholine cytidylyltransferase 817786 At2g32260 3.6 3.0
 2.1
 3.0
 2557.8
 2.0
 -0.5
 2.2
 0.4
 2.1
 1.5
0.5
 3.3
2.0
 2.6
1.2
 2.1
2.0
 4.8
2.1
 4.5
1.3
 4.2
 2.4
 0.9
-0.3
34 AT1G60200 splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein 842315 At1g60200 3.6 2.2
 1.8
 2.1
 5332.4
 0.2
 -0.4
 1.3
 -0.0
 2.5
 2.1
 1.9
1.4
 2.5
1.8
 3.0
2.1
 0.8
0.6
 0.2
 3.8
 1.2
 -0.3
35 AME3 Protein kinase superfamily protein 829401 At4g32660 3.6 4.2
 3.5
 3.7
 308.3
 0.7
 2.0
 3.8
 0.3
 2.5
 1.8
 3.7
2.5
 2.4
1.4
 2.8
 0.8
 0.9

3.3
36 ARF2 auxin response factor 2 836321 At5g62000 3.5 0.3
 0.9
 -0.5
 1767.2
 -0.0
 -0.1
 0.5
 1.7
 2.3
 1.3
 2.0
1.6
 2.9
2.2
 1.9
1.6
 0.9
0.7
 -0.2
 1.7
0.3
 2.7
0.7
 1.0
0.6
37 AT1G14390 Leucine-rich repeat protein kinase family protein 838001 At1g14390 3.5 -0.0
 -0.8
 0.8
 8907.8
 0.3
 -1.2
 2.2
 -0.6
 0.8
 -1.3
-1.4
 0.1
-0.7
 0.3
-0.7
 -1.1
 -1.3
 -0.2
 -0.6
 -0.7
 0.6
38 COAD 4-phosphopantetheine adenylyltransferase 816341 At2g18250 3.5 -0.7
 0.2
 -1.4
 5107.6
 -0.7
 -0.9
 1.3
 -0.8
 0.0
 1.8
 1.4
0.3
 0.9
0.7

0.9
 3.5
 1.9
 -0.1
-0.2
39 AT5G25070 neurofilament light protein 832578 At5g25070 3.5 1.1
 0.8
 1.1
 3079.3
 -1.2
 -0.7
 1.6
 1.9
 0.9
 -0.1
 1.4
 1.2
 -0.2
 4.1
 0.1

-0.0
40 AT1G02300 Cysteine proteinases superfamily protein 839576 At1g02300 3.5 -0.1
 -0.4
 0.2
 20514.7
 0.6
 -2.8
 1.9
 -2.4
 0.4
 0.6
0.6
 0.2
-0.2
 0.2
-0.1
 0.3
0.2
 1.3
-0.1
 1.1
0.4
 -0.9
-1.0
 2.2
-0.6
 1.0
41 CDPK19 calcium-dependent protein kinase 19 832065 At5g19450 3.5 1.7
 1.8
 1.2
 1932.4
 -0.3
 1.1
 1.4
 0.4
 1.3
 2.5
2.4
 3.2
3.2
 6.4
6.2
 1.1
0.5
 1.2
0.6
 2.8
2.0
 1.9
1.8
 2.2
1.9
 0.8
0.6
42 AT5G52280 Myosin heavy chain-related protein 835304 At5g52280 3.5 -0.1
 -0.7
 0.5
 4243.1
 0.1
 0.2
 2.5
 -0.9
 0.4
 -1.0
-1.3
 -0.3
-0.5
 0.3
0.2
 -0.1
-0.1
 -1.1
-1.1
 0.7
0.2
 0.9
-1.5
 1.2
-0.8
 -0.9
43 AT1G33360 ATP-dependent Clp protease 840230 At1g33360 3.5 1.1
 0.5
 1.4
 7926.6
 0.6
 -0.0
 0.3
 -0.1
 0.1
 1.9
-0.8
 0.9
0.3
 1.0
0.8
 1.3
0.7
 1.6
1.2
 0.2
 3.3
3.2
 1.9
0.9
 -0.8
44 AT2G43210 Ubiquitin-like superfamily protein 818922 At2g43210 3.4 1.5
 0.8
 1.8
 3795.8
 -2.2
 -1.8
 2.2
 1.3
 0.0
 1.1

1.7
0.9
 0.5
-0.7
0.7
 -0.1
 -0.0
45 CASP CCAAT-displacement protein alternatively spliced product 821377 At3g18480 3.4 1.3
 0.1
 2.0
 6754.7
 -0.7
 -0.6
 1.4
 -0.5
 0.4
 -1.3
 1.1
0.2
 1.3
0.6
 0.6
 -0.9
 0.8
 1.4
 0.4
 2.0
46 DRP3B dynamin related protein 815898 At2g14120 3.4 2.5
 1.8
 2.5
 9605.0
 0.0
 -1.0
 0.6
 0.3
 0.6
 2.2
0.5
 3.5
3.2
 3.6
2.1
 1.4
0.5
 -1.1
-1.5
 1.4
0.7
 2.6
0.8
 3.2
0.0
 0.5
47 AT5G04020 calmodulin binding protein 830281 At5g04020 3.4 2.2
 1.8
 2.0
 196.6
 1.3
 0.7
 3.4
 3.2
 1.1
 -1.5
 0.3
0.1
 1.5
1.4
 0.5
0.4
 1.0
-0.1
 0.8
 1.2
-0.1
 1.0
-0.2
48 AT5G45190 Cyclin family protein 834555 At5g45190 3.4 2.7
 2.5
 2.2
 2774.7
 -0.5
 0.2
 0.9
 1.0
 2.3
 3.1
2.4
 3.6
2.7
 3.9
2.1
 3.8
3.8
 1.9
1.4
 2.0
0.9
 1.8
 1.2
 1.0
-0.1
49 BCA6 beta carbonic anhydrase 6 842185 At1g58180 3.4 1.3
 1.2
 1.1
 2683.8
 0.3
 0.5
 1.1
 0.9
 3.0
 0.1







50 CUL1 cullin 1 825648 At4g02570 3.4 1.2
 0.9
 1.2
 12454.4
 0.3
 -0.2
 0.6
 -0.4
 0.3
 2.4
 4.9
2.8
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2.0
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1.4
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1.4
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